Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2210
Gene name
LocationContig_1512:3563..4211
Strand+
Gene length (bp)648
Transcript length (bp)405
Coding sequence length (bp)405
Protein length (aa) 135

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus 0.6762 0.5338 0.0628 0.1049 0.1817 0.0219 0.2023 0.2996 0.2094 0.1749

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4983
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6515
Ophiocordyceps australis map64 (Brazil) OphauB2|7613
Ophiocordyceps camponoti-rufipedis Ophun1|2246
Ophiocordyceps kimflemingae Ophio5|4812
Ophiocordyceps subramaniannii Hirsu2|2210 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2210
MSSFINIPAGLASAATVFYDASKAMGSSSASSYSSSPSPSSPSSTPGTKMLHARRPSLLSSAISKQQCTVINIGD
PDGPPRLISYLSSSQGFAWNPEIFLPSYVDCDYEPLENQCEPVHEIVLSDEESRDLLPQ*
Coding >Hirsu2|2210
ATGTCGTCCTTCATCAACATCCCCGCCGGCCTCGCTTCCGCCGCCACCGTCTTCTACGATGCCTCCAAGGCCATG
GGCAGTTCTTCGGCCAGCTCCTACTCGAGCTCGCCCTCGCCCTCGTCGCCCTCGTCGACGCCCGGCACCAAGATG
CTGCACGCCCGACGCCCTAGCCTGTTGAGCTCCGCCATTTCCAAGCAACAGTGCACCGTCATCAACATCGGCGAC
CCGGACGGTCCCCCCCGACTGATCTCGTATCTGTCGTCGAGCCAAGGCTTCGCCTGGAACCCAGAAATCTTCCTT
CCCTCCTACGTCGACTGCGACTACGAGCCGCTCGAAAACCAATGCGAACCGGTACACGAGATCGTCCTGAGCGAC
GAAGAATCGAGGGATCTTCTGCCGCAATAA
Transcript >Hirsu2|2210
ATGTCGTCCTTCATCAACATCCCCGCCGGCCTCGCTTCCGCCGCCACCGTCTTCTACGATGCCTCCAAGGCCATG
GGCAGTTCTTCGGCCAGCTCCTACTCGAGCTCGCCCTCGCCCTCGTCGCCCTCGTCGACGCCCGGCACCAAGATG
CTGCACGCCCGACGCCCTAGCCTGTTGAGCTCCGCCATTTCCAAGCAACAGTGCACCGTCATCAACATCGGCGAC
CCGGACGGTCCCCCCCGACTGATCTCGTATCTGTCGTCGAGCCAAGGCTTCGCCTGGAACCCAGAAATCTTCCTT
CCCTCCTACGTCGACTGCGACTACGAGCCGCTCGAAAACCAATGCGAACCGGTACACGAGATCGTCCTGAGCGAC
GAAGAATCGAGGGATCTTCTGCCGCAATAA
Gene >Hirsu2|2210
ATGTCGTCCTTCATCAACATCCCCGCCGGCCTCGCTTCCGCCGCCACCGTCTTCTACGATGCCTCCAAGGCCATG
GGCAGTTCTTCGGCCAGCTCCTACTCGAGCTCGCCCTCGCCCTCGTCGCCCTCGTCGACGCCCGGCACCAAGATG
CTGCACGCCCGACGCCCTAGCCTGTTGAGTAAGGCCGTCTTCCCCGGTCGGCGGGCCTCACCGCCATTCCGACCG
CTCCGCCCGTCACCGGCCTGGCCGTGGCCGGCCGGAACGGCCACGCTTGCCCGCACTGCCGCTGACCCAAGATGC
ACACGCAGGCTCCGCCATTTCCAAGCAACAGTGCACCGTCATCAACATCGGCGACCCGGACGGTCCCCCCCGACT
GGTAGGCGCCGCCCCCCGCCCGCTGCACGCCGCGATACTGACAGGGCCGCCCCCCCCAGATCTCGTATCTGTCGT
CGAGCCAAGGCTTCGCCTGGAACCCAGGTACGGCCAAACGGGAAACGATGCAAGCGGCAGACTGCTGACCAGACG
CCATCAGAAATCTTCCTTCCCTCCTACGTCGACTGCGACTACGAGCCGCTCGAAAACCAATGCGAACCGGTACAC
GAGATCGTCCTGAGCGACGAAGAATCGAGGGATCTTCTGCCGCAATAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail