Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|2196
Gene name
Location	Contig_151:19530..20850
Strand	+
Gene length (bp)	1320
Transcript length (bp)	1320
Coding sequence length (bp)	1320
Protein length (aa)	440

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF11735	CAP59_mtransfer	Cryptococcal mannosyltransferase 1	2.5E-66	116	362

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q6U1Z4\|CMT1_CRYNJ	Alpha-1,3-mannosyltransferase CMT1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CMT1 PE=1 SV=1	116	424	7.0E-48

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	7	26	19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|2196 MSPRLRRVAVPLGAILLTCGSLYFYLRADHDFKLSPLLPAPSRHPPLQQEPVDHEAITPNKATTTPSILTSANVT SYLSAILDAQSGRLPSLECPVLNRTRYESLKPVDSDGPAIRYFFALNLRESLPLLPRLAGSLVEVMRFLGPQHCA LSVVEGNSPDGTADVLAALRSGVEALGASYFFESSPIDPAADGGADRIRRLAQLRNKALEPLLDSARSRRADGNT TVLFVNDVAACPEDLLELALQRRRLGGDMACAMDWTCNGGDPPSCNFYDVWIARDIAGDSFFRIPNDASWGRALD LFWAESETRARFQAHRPFQVFSCWNGAVAMGAQPFLEDLSFRPPDQGAGECFQGEPQLLCKDMWRRGYHKIAVVP TVNLAYTLDHSAIIKKDKGFVSDLVAFQDWEGDALEWRAEPPEKVRCMPTFTSQSMEPWNQSFS*
Coding	>Hirsu2\|2196 ATGTCTCCGAGGCTTCGTCGTGTCGCGGTGCCCCTGGGCGCAATTCTGCTCACATGCGGAAGCCTGTACTTTTAC CTGCGCGCCGACCACGACTTCAAGTTGTCTCCGCTGCTCCCTGCACCCTCGCGCCATCCGCCTCTCCAGCAAGAG CCGGTCGACCATGAGGCCATCACGCCGAACAAGGCGACGACGACGCCGTCCATCCTGACGAGCGCCAACGTCACG TCGTACCTGAGCGCCATCTTGGACGCGCAATCCGGCCGGCTGCCCTCGCTCGAGTGCCCCGTCCTCAACAGGACG CGATACGAGTCCCTCAAGCCCGTCGACTCCGACGGCCCTGCCATCCGCTACTTCTTCGCCCTCAACCTGCGTGAG AGCCTGCCGCTGCTGCCTCGGCTCGCCGGCAGCCTGGTCGAGGTGATGCGCTTCCTCGGCCCGCAGCACTGCGCC CTGTCCGTCGTCGAGGGCAACTCACCCGACGGCACGGCCGACGTCCTGGCGGCGCTGCGGTCCGGCGTCGAGGCC CTGGGCGCCAGCTACTTCTTCGAGTCGTCGCCCATTGACCCGGCCGCGGACGGCGGCGCGGACCGCATCCGGCGG CTCGCACAGCTGCGCAACAAGGCGCTCGAGCCGCTCCTCGACAGCGCCCGGAGCCGCCGGGCCGACGGCAACACC ACCGTCCTCTTCGTCAACGACGTGGCCGCCTGCCCCGAGGACCTGCTCGAGCTGGCCCTGCAGCGCCGGCGGCTG GGCGGCGACATGGCCTGCGCCATGGACTGGACCTGCAACGGCGGAGATCCGCCGAGCTGCAACTTCTACGACGTC TGGATCGCGCGCGACATTGCCGGCGATTCCTTCTTCCGCATCCCCAACGACGCGAGCTGGGGGCGCGCCCTCGAT CTCTTCTGGGCCGAGTCCGAGACGCGCGCGCGCTTCCAAGCCCACCGTCCCTTCCAGGTCTTCTCCTGCTGGAAC GGCGCCGTCGCCATGGGCGCCCAGCCCTTCCTCGAGGACCTGAGCTTCCGCCCGCCCGACCAAGGGGCCGGCGAG TGCTTCCAGGGCGAGCCGCAGCTGTTGTGCAAGGACATGTGGCGTCGCGGCTACCACAAGATTGCCGTCGTGCCC ACCGTCAATCTCGCATACACGCTCGACCACAGCGCCATCATCAAGAAGGACAAGGGCTTCGTGTCTGACTTGGTC GCCTTCCAGGACTGGGAAGGCGATGCGCTTGAGTGGCGGGCCGAACCCCCTGAAAAGGTCCGGTGCATGCCCACC TTCACCAGTCAGTCGATGGAACCGTGGAATCAATCCTTCTCGTGA
Transcript	>Hirsu2\|2196 ATGTCTCCGAGGCTTCGTCGTGTCGCGGTGCCCCTGGGCGCAATTCTGCTCACATGCGGAAGCCTGTACTTTTAC CTGCGCGCCGACCACGACTTCAAGTTGTCTCCGCTGCTCCCTGCACCCTCGCGCCATCCGCCTCTCCAGCAAGAG CCGGTCGACCATGAGGCCATCACGCCGAACAAGGCGACGACGACGCCGTCCATCCTGACGAGCGCCAACGTCACG TCGTACCTGAGCGCCATCTTGGACGCGCAATCCGGCCGGCTGCCCTCGCTCGAGTGCCCCGTCCTCAACAGGACG CGATACGAGTCCCTCAAGCCCGTCGACTCCGACGGCCCTGCCATCCGCTACTTCTTCGCCCTCAACCTGCGTGAG AGCCTGCCGCTGCTGCCTCGGCTCGCCGGCAGCCTGGTCGAGGTGATGCGCTTCCTCGGCCCGCAGCACTGCGCC CTGTCCGTCGTCGAGGGCAACTCACCCGACGGCACGGCCGACGTCCTGGCGGCGCTGCGGTCCGGCGTCGAGGCC CTGGGCGCCAGCTACTTCTTCGAGTCGTCGCCCATTGACCCGGCCGCGGACGGCGGCGCGGACCGCATCCGGCGG CTCGCACAGCTGCGCAACAAGGCGCTCGAGCCGCTCCTCGACAGCGCCCGGAGCCGCCGGGCCGACGGCAACACC ACCGTCCTCTTCGTCAACGACGTGGCCGCCTGCCCCGAGGACCTGCTCGAGCTGGCCCTGCAGCGCCGGCGGCTG GGCGGCGACATGGCCTGCGCCATGGACTGGACCTGCAACGGCGGAGATCCGCCGAGCTGCAACTTCTACGACGTC TGGATCGCGCGCGACATTGCCGGCGATTCCTTCTTCCGCATCCCCAACGACGCGAGCTGGGGGCGCGCCCTCGAT CTCTTCTGGGCCGAGTCCGAGACGCGCGCGCGCTTCCAAGCCCACCGTCCCTTCCAGGTCTTCTCCTGCTGGAAC GGCGCCGTCGCCATGGGCGCCCAGCCCTTCCTCGAGGACCTGAGCTTCCGCCCGCCCGACCAAGGGGCCGGCGAG TGCTTCCAGGGCGAGCCGCAGCTGTTGTGCAAGGACATGTGGCGTCGCGGCTACCACAAGATTGCCGTCGTGCCC ACCGTCAATCTCGCATACACGCTCGACCACAGCGCCATCATCAAGAAGGACAAGGGCTTCGTGTCTGACTTGGTC GCCTTCCAGGACTGGGAAGGCGATGCGCTTGAGTGGCGGGCCGAACCCCCTGAAAAGGTCCGGTGCATGCCCACC TTCACCAGTCAGTCGATGGAACCGTGGAATCAATCCTTCTCGTGA
Gene	>Hirsu2\|2196 ATGTCTCCGAGGCTTCGTCGTGTCGCGGTGCCCCTGGGCGCAATTCTGCTCACATGCGGAAGCCTGTACTTTTAC CTGCGCGCCGACCACGACTTCAAGTTGTCTCCGCTGCTCCCTGCACCCTCGCGCCATCCGCCTCTCCAGCAAGAG CCGGTCGACCATGAGGCCATCACGCCGAACAAGGCGACGACGACGCCGTCCATCCTGACGAGCGCCAACGTCACG TCGTACCTGAGCGCCATCTTGGACGCGCAATCCGGCCGGCTGCCCTCGCTCGAGTGCCCCGTCCTCAACAGGACG CGATACGAGTCCCTCAAGCCCGTCGACTCCGACGGCCCTGCCATCCGCTACTTCTTCGCCCTCAACCTGCGTGAG AGCCTGCCGCTGCTGCCTCGGCTCGCCGGCAGCCTGGTCGAGGTGATGCGCTTCCTCGGCCCGCAGCACTGCGCC CTGTCCGTCGTCGAGGGCAACTCACCCGACGGCACGGCCGACGTCCTGGCGGCGCTGCGGTCCGGCGTCGAGGCC CTGGGCGCCAGCTACTTCTTCGAGTCGTCGCCCATTGACCCGGCCGCGGACGGCGGCGCGGACCGCATCCGGCGG CTCGCACAGCTGCGCAACAAGGCGCTCGAGCCGCTCCTCGACAGCGCCCGGAGCCGCCGGGCCGACGGCAACACC ACCGTCCTCTTCGTCAACGACGTGGCCGCCTGCCCCGAGGACCTGCTCGAGCTGGCCCTGCAGCGCCGGCGGCTG GGCGGCGACATGGCCTGCGCCATGGACTGGACCTGCAACGGCGGAGATCCGCCGAGCTGCAACTTCTACGACGTC TGGATCGCGCGCGACATTGCCGGCGATTCCTTCTTCCGCATCCCCAACGACGCGAGCTGGGGGCGCGCCCTCGAT CTCTTCTGGGCCGAGTCCGAGACGCGCGCGCGCTTCCAAGCCCACCGTCCCTTCCAGGTCTTCTCCTGCTGGAAC GGCGCCGTCGCCATGGGCGCCCAGCCCTTCCTCGAGGACCTGAGCTTCCGCCCGCCCGACCAAGGGGCCGGCGAG TGCTTCCAGGGCGAGCCGCAGCTGTTGTGCAAGGACATGTGGCGTCGCGGCTACCACAAGATTGCCGTCGTGCCC ACCGTCAATCTCGCATACACGCTCGACCACAGCGCCATCATCAAGAAGGACAAGGGCTTCGTGTCTGACTTGGTC GCCTTCCAGGACTGGGAAGGCGATGCGCTTGAGTGGCGGGCCGAACCCCCTGAAAAGGTCCGGTGCATGCCCACC TTCACCAGTCAGTCGATGGAACCGTGGAATCAATCCTTCTCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail