Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2196
Gene name
LocationContig_151:19530..20850
Strand+
Gene length (bp)1320
Transcript length (bp)1320
Coding sequence length (bp)1320
Protein length (aa) 440

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11735 CAP59_mtransfer Cryptococcal mannosyltransferase 1 7.1E-67 116 362

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q6U1Z4|CMT1_CRYNJ Alpha-1,3-mannosyltransferase CMT1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CMT1 PE=1 SV=1 116 424 7.0E-48

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 7 26 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2196
MSPRLRRVAVPLGAILLTCGSLYFYLRADHDFKLSPLLPAPSRHPPLQQEPVDHEAITPNKATTTPSILTSANVT
SYLSAILDAQSGRLPSLECPVLNRTRYESLKPVDSDGPAIRYFFALNLRESLPLLPRLAGSLVEVMRFLGPQHCA
LSVVEGNSPDGTADVLAALRSGVEALGASYFFESSPIDPAADGGADRIRRLAQLRNKALEPLLDSARSRRADGNT
TVLFVNDVAACPEDLLELALQRRRLGGDMACAMDWTCNGGDPPSCNFYDVWIARDIAGDSFFRIPNDASWGRALD
LFWAESETRARFQAHRPFQVFSCWNGAVAMGAQPFLEDLSFRPPDQGAGECFQGEPQLLCKDMWRRGYHKIAVVP
TVNLAYTLDHSAIIKKDKGFVSDLVAFQDWEGDALEWRAEPPEKVRCMPTFTSQSMEPWNQSFS*
Coding >Hirsu2|2196
ATGTCTCCGAGGCTTCGTCGTGTCGCGGTGCCCCTGGGCGCAATTCTGCTCACATGCGGAAGCCTGTACTTTTAC
CTGCGCGCCGACCACGACTTCAAGTTGTCTCCGCTGCTCCCTGCACCCTCGCGCCATCCGCCTCTCCAGCAAGAG
CCGGTCGACCATGAGGCCATCACGCCGAACAAGGCGACGACGACGCCGTCCATCCTGACGAGCGCCAACGTCACG
TCGTACCTGAGCGCCATCTTGGACGCGCAATCCGGCCGGCTGCCCTCGCTCGAGTGCCCCGTCCTCAACAGGACG
CGATACGAGTCCCTCAAGCCCGTCGACTCCGACGGCCCTGCCATCCGCTACTTCTTCGCCCTCAACCTGCGTGAG
AGCCTGCCGCTGCTGCCTCGGCTCGCCGGCAGCCTGGTCGAGGTGATGCGCTTCCTCGGCCCGCAGCACTGCGCC
CTGTCCGTCGTCGAGGGCAACTCACCCGACGGCACGGCCGACGTCCTGGCGGCGCTGCGGTCCGGCGTCGAGGCC
CTGGGCGCCAGCTACTTCTTCGAGTCGTCGCCCATTGACCCGGCCGCGGACGGCGGCGCGGACCGCATCCGGCGG
CTCGCACAGCTGCGCAACAAGGCGCTCGAGCCGCTCCTCGACAGCGCCCGGAGCCGCCGGGCCGACGGCAACACC
ACCGTCCTCTTCGTCAACGACGTGGCCGCCTGCCCCGAGGACCTGCTCGAGCTGGCCCTGCAGCGCCGGCGGCTG
GGCGGCGACATGGCCTGCGCCATGGACTGGACCTGCAACGGCGGAGATCCGCCGAGCTGCAACTTCTACGACGTC
TGGATCGCGCGCGACATTGCCGGCGATTCCTTCTTCCGCATCCCCAACGACGCGAGCTGGGGGCGCGCCCTCGAT
CTCTTCTGGGCCGAGTCCGAGACGCGCGCGCGCTTCCAAGCCCACCGTCCCTTCCAGGTCTTCTCCTGCTGGAAC
GGCGCCGTCGCCATGGGCGCCCAGCCCTTCCTCGAGGACCTGAGCTTCCGCCCGCCCGACCAAGGGGCCGGCGAG
TGCTTCCAGGGCGAGCCGCAGCTGTTGTGCAAGGACATGTGGCGTCGCGGCTACCACAAGATTGCCGTCGTGCCC
ACCGTCAATCTCGCATACACGCTCGACCACAGCGCCATCATCAAGAAGGACAAGGGCTTCGTGTCTGACTTGGTC
GCCTTCCAGGACTGGGAAGGCGATGCGCTTGAGTGGCGGGCCGAACCCCCTGAAAAGGTCCGGTGCATGCCCACC
TTCACCAGTCAGTCGATGGAACCGTGGAATCAATCCTTCTCGTGA
Transcript >Hirsu2|2196
ATGTCTCCGAGGCTTCGTCGTGTCGCGGTGCCCCTGGGCGCAATTCTGCTCACATGCGGAAGCCTGTACTTTTAC
CTGCGCGCCGACCACGACTTCAAGTTGTCTCCGCTGCTCCCTGCACCCTCGCGCCATCCGCCTCTCCAGCAAGAG
CCGGTCGACCATGAGGCCATCACGCCGAACAAGGCGACGACGACGCCGTCCATCCTGACGAGCGCCAACGTCACG
TCGTACCTGAGCGCCATCTTGGACGCGCAATCCGGCCGGCTGCCCTCGCTCGAGTGCCCCGTCCTCAACAGGACG
CGATACGAGTCCCTCAAGCCCGTCGACTCCGACGGCCCTGCCATCCGCTACTTCTTCGCCCTCAACCTGCGTGAG
AGCCTGCCGCTGCTGCCTCGGCTCGCCGGCAGCCTGGTCGAGGTGATGCGCTTCCTCGGCCCGCAGCACTGCGCC
CTGTCCGTCGTCGAGGGCAACTCACCCGACGGCACGGCCGACGTCCTGGCGGCGCTGCGGTCCGGCGTCGAGGCC
CTGGGCGCCAGCTACTTCTTCGAGTCGTCGCCCATTGACCCGGCCGCGGACGGCGGCGCGGACCGCATCCGGCGG
CTCGCACAGCTGCGCAACAAGGCGCTCGAGCCGCTCCTCGACAGCGCCCGGAGCCGCCGGGCCGACGGCAACACC
ACCGTCCTCTTCGTCAACGACGTGGCCGCCTGCCCCGAGGACCTGCTCGAGCTGGCCCTGCAGCGCCGGCGGCTG
GGCGGCGACATGGCCTGCGCCATGGACTGGACCTGCAACGGCGGAGATCCGCCGAGCTGCAACTTCTACGACGTC
TGGATCGCGCGCGACATTGCCGGCGATTCCTTCTTCCGCATCCCCAACGACGCGAGCTGGGGGCGCGCCCTCGAT
CTCTTCTGGGCCGAGTCCGAGACGCGCGCGCGCTTCCAAGCCCACCGTCCCTTCCAGGTCTTCTCCTGCTGGAAC
GGCGCCGTCGCCATGGGCGCCCAGCCCTTCCTCGAGGACCTGAGCTTCCGCCCGCCCGACCAAGGGGCCGGCGAG
TGCTTCCAGGGCGAGCCGCAGCTGTTGTGCAAGGACATGTGGCGTCGCGGCTACCACAAGATTGCCGTCGTGCCC
ACCGTCAATCTCGCATACACGCTCGACCACAGCGCCATCATCAAGAAGGACAAGGGCTTCGTGTCTGACTTGGTC
GCCTTCCAGGACTGGGAAGGCGATGCGCTTGAGTGGCGGGCCGAACCCCCTGAAAAGGTCCGGTGCATGCCCACC
TTCACCAGTCAGTCGATGGAACCGTGGAATCAATCCTTCTCGTGA
Gene >Hirsu2|2196
ATGTCTCCGAGGCTTCGTCGTGTCGCGGTGCCCCTGGGCGCAATTCTGCTCACATGCGGAAGCCTGTACTTTTAC
CTGCGCGCCGACCACGACTTCAAGTTGTCTCCGCTGCTCCCTGCACCCTCGCGCCATCCGCCTCTCCAGCAAGAG
CCGGTCGACCATGAGGCCATCACGCCGAACAAGGCGACGACGACGCCGTCCATCCTGACGAGCGCCAACGTCACG
TCGTACCTGAGCGCCATCTTGGACGCGCAATCCGGCCGGCTGCCCTCGCTCGAGTGCCCCGTCCTCAACAGGACG
CGATACGAGTCCCTCAAGCCCGTCGACTCCGACGGCCCTGCCATCCGCTACTTCTTCGCCCTCAACCTGCGTGAG
AGCCTGCCGCTGCTGCCTCGGCTCGCCGGCAGCCTGGTCGAGGTGATGCGCTTCCTCGGCCCGCAGCACTGCGCC
CTGTCCGTCGTCGAGGGCAACTCACCCGACGGCACGGCCGACGTCCTGGCGGCGCTGCGGTCCGGCGTCGAGGCC
CTGGGCGCCAGCTACTTCTTCGAGTCGTCGCCCATTGACCCGGCCGCGGACGGCGGCGCGGACCGCATCCGGCGG
CTCGCACAGCTGCGCAACAAGGCGCTCGAGCCGCTCCTCGACAGCGCCCGGAGCCGCCGGGCCGACGGCAACACC
ACCGTCCTCTTCGTCAACGACGTGGCCGCCTGCCCCGAGGACCTGCTCGAGCTGGCCCTGCAGCGCCGGCGGCTG
GGCGGCGACATGGCCTGCGCCATGGACTGGACCTGCAACGGCGGAGATCCGCCGAGCTGCAACTTCTACGACGTC
TGGATCGCGCGCGACATTGCCGGCGATTCCTTCTTCCGCATCCCCAACGACGCGAGCTGGGGGCGCGCCCTCGAT
CTCTTCTGGGCCGAGTCCGAGACGCGCGCGCGCTTCCAAGCCCACCGTCCCTTCCAGGTCTTCTCCTGCTGGAAC
GGCGCCGTCGCCATGGGCGCCCAGCCCTTCCTCGAGGACCTGAGCTTCCGCCCGCCCGACCAAGGGGCCGGCGAG
TGCTTCCAGGGCGAGCCGCAGCTGTTGTGCAAGGACATGTGGCGTCGCGGCTACCACAAGATTGCCGTCGTGCCC
ACCGTCAATCTCGCATACACGCTCGACCACAGCGCCATCATCAAGAAGGACAAGGGCTTCGTGTCTGACTTGGTC
GCCTTCCAGGACTGGGAAGGCGATGCGCTTGAGTGGCGGGCCGAACCCCCTGAAAAGGTCCGGTGCATGCCCACC
TTCACCAGTCAGTCGATGGAACCGTGGAATCAATCCTTCTCGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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