Protein ID | Hirsu2|2191 |
Gene name | |
Location | Contig_1508:3904..5685 |
Strand | - |
Gene length (bp) | 1781 |
Transcript length (bp) | 1656 |
Coding sequence length (bp) | 1656 |
Protein length (aa) | 552 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 43 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 86 | 108 | 22 |
2 | 114 | 136 | 22 |
3 | 148 | 170 | 22 |
4 | 195 | 217 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2191 MSPPVKPFVYISQGPDSRFPATTFDPKSVTRASWKPKLMKPPRCGPLISFNRHPDSHSAPPRQTHPYLPIGPRAR TWIKWVRRGQLVLRAVQLTGALGILTLMVIILGPSEATAWVMRITPGISVIHCLYATYHLARNAAARTPATSAAY QAFAVMLDLSVVSLYTYGAFSAHQQMSSWYTRFSSQDATPHLTLAVYYLLIGTGTLHLVSISVSLWLALTFRKIS LMPPDVNPLEGNLITRSLHKGNESSVTSISTAKNYKVLSTVRLQKSNTSTSSYQGDRTLLCIPFKYTRAGATYPP STPEDPQFHLPAGHCLPHHDTSSQTQLSCISRQRVTSRSSGGKDRLCTELLVVDSSSPSRCAVSTAPRRPKFTET LQPPDSHISRANRLFFIPGTAPDYSALPQHCSSPEVCDSEEEDVYNPKSDKTSLRLHPNPLRLHPTRNALCLSID VSTSVRSLDSCVTKDELNLFPDFDNGQRQYTVGSDTAEGEPLGLRQIQDFVRTKDRPFSRLHGEPCASVSIGNNR KTSSGNDYKSEDTPLVFGRRNYSSSK* |
Coding | >Hirsu2|2191 ATGAGCCCTCCTGTCAAGCCTTTCGTGTATATTTCCCAGGGGCCCGATTCGCGATTCCCCGCCACGACGTTTGAC CCCAAATCCGTCACGAGGGCTAGCTGGAAGCCTAAGCTCATGAAACCCCCGCGTTGTGGGCCCTTGATTTCGTTC AATCGACACCCAGACTCTCATTCTGCGCCTCCACGACAGACACATCCGTACCTGCCTATTGGACCCCGTGCCAGG ACTTGGATCAAATGGGTGCGGCGCGGGCAGCTGGTTCTGCGAGCTGTGCAGTTGACTGGTGCCTTGGGCATCCTG ACTTTGATGGTCATAATCCTAGGGCCGAGTGAAGCTACGGCTTGGGTTATGAGAATCACTCCTGGGATTTCCGTC ATACACTGCCTTTACGCCACATACCACCTTGCACGAAACGCTGCCGCTCGTACGCCCGCCACTTCTGCGGCCTAT CAAGCTTTTGCGGTCATGCTGGACCTCTCTGTTGTGAGCCTGTACACGTACGGAGCCTTTTCTGCGCATCAGCAG ATGAGCTCTTGGTATACGAGATTCAGCAGCCAGGACGCCACGCCTCATCTCACATTGGCTGTCTATTACCTCCTC ATTGGCACTGGGACCCTGCATCTAGTTTCAATCTCAGTTTCACTGTGGCTGGCTCTGACGTTTCGAAAAATTAGT CTCATGCCGCCTGATGTGAACCCTTTAGAGGGCAACTTGATCACACGGTCCCTTCACAAAGGAAACGAATCCTCA GTAACATCAATAAGCACCGCTAAGAATTACAAGGTGCTTTCGACAGTTCGTCTACAGAAGAGCAACACCTCAACT AGTTCATATCAGGGCGATCGTACGCTTCTCTGCATCCCCTTCAAGTACACAAGGGCAGGGGCAACCTATCCGCCA TCGACCCCAGAAGATCCACAGTTCCATCTCCCAGCTGGACACTGTCTACCCCATCACGACACCTCGTCCCAAACC CAGCTCTCTTGTATTAGTCGGCAAAGGGTAACGTCAAGGTCCAGCGGGGGCAAGGACAGATTATGCACGGAACTG CTGGTTGTGGACTCCAGCTCGCCGTCTCGTTGCGCCGTTTCCACTGCTCCCCGCAGACCCAAGTTCACCGAGACG TTGCAACCCCCAGATTCACACATCTCGAGGGCTAATCGCCTATTCTTCATCCCCGGAACTGCGCCGGATTATTCC GCCTTGCCACAGCACTGCAGTTCTCCCGAGGTGTGTGACTCAGAGGAGGAGGATGTATACAACCCTAAAAGTGAT AAGACCTCGTTGAGGTTGCACCCTAATCCCCTCCGCTTGCACCCAACACGGAATGCACTGTGTTTGTCAATTGAT GTCAGCACGTCGGTACGTTCACTGGATAGCTGCGTTACTAAAGACGAGCTCAATCTCTTTCCCGATTTTGACAAC GGCCAACGGCAGTACACCGTCGGAAGCGATACTGCGGAGGGTGAGCCACTGGGGCTCAGGCAAATACAAGACTTC GTTCGAACAAAAGATCGTCCCTTTTCAAGGTTACATGGCGAACCTTGCGCATCGGTATCAATTGGCAACAATAGA AAGACTTCGTCGGGTAACGACTACAAATCTGAAGACACTCCTCTGGTCTTCGGTCGACGGAATTACAGCAGTAGC AAATGA |
Transcript | >Hirsu2|2191 ATGAGCCCTCCTGTCAAGCCTTTCGTGTATATTTCCCAGGGGCCCGATTCGCGATTCCCCGCCACGACGTTTGAC CCCAAATCCGTCACGAGGGCTAGCTGGAAGCCTAAGCTCATGAAACCCCCGCGTTGTGGGCCCTTGATTTCGTTC AATCGACACCCAGACTCTCATTCTGCGCCTCCACGACAGACACATCCGTACCTGCCTATTGGACCCCGTGCCAGG ACTTGGATCAAATGGGTGCGGCGCGGGCAGCTGGTTCTGCGAGCTGTGCAGTTGACTGGTGCCTTGGGCATCCTG ACTTTGATGGTCATAATCCTAGGGCCGAGTGAAGCTACGGCTTGGGTTATGAGAATCACTCCTGGGATTTCCGTC ATACACTGCCTTTACGCCACATACCACCTTGCACGAAACGCTGCCGCTCGTACGCCCGCCACTTCTGCGGCCTAT CAAGCTTTTGCGGTCATGCTGGACCTCTCTGTTGTGAGCCTGTACACGTACGGAGCCTTTTCTGCGCATCAGCAG ATGAGCTCTTGGTATACGAGATTCAGCAGCCAGGACGCCACGCCTCATCTCACATTGGCTGTCTATTACCTCCTC ATTGGCACTGGGACCCTGCATCTAGTTTCAATCTCAGTTTCACTGTGGCTGGCTCTGACGTTTCGAAAAATTAGT CTCATGCCGCCTGATGTGAACCCTTTAGAGGGCAACTTGATCACACGGTCCCTTCACAAAGGAAACGAATCCTCA GTAACATCAATAAGCACCGCTAAGAATTACAAGGTGCTTTCGACAGTTCGTCTACAGAAGAGCAACACCTCAACT AGTTCATATCAGGGCGATCGTACGCTTCTCTGCATCCCCTTCAAGTACACAAGGGCAGGGGCAACCTATCCGCCA TCGACCCCAGAAGATCCACAGTTCCATCTCCCAGCTGGACACTGTCTACCCCATCACGACACCTCGTCCCAAACC CAGCTCTCTTGTATTAGTCGGCAAAGGGTAACGTCAAGGTCCAGCGGGGGCAAGGACAGATTATGCACGGAACTG CTGGTTGTGGACTCCAGCTCGCCGTCTCGTTGCGCCGTTTCCACTGCTCCCCGCAGACCCAAGTTCACCGAGACG TTGCAACCCCCAGATTCACACATCTCGAGGGCTAATCGCCTATTCTTCATCCCCGGAACTGCGCCGGATTATTCC GCCTTGCCACAGCACTGCAGTTCTCCCGAGGTGTGTGACTCAGAGGAGGAGGATGTATACAACCCTAAAAGTGAT AAGACCTCGTTGAGGTTGCACCCTAATCCCCTCCGCTTGCACCCAACACGGAATGCACTGTGTTTGTCAATTGAT GTCAGCACGTCGGTACGTTCACTGGATAGCTGCGTTACTAAAGACGAGCTCAATCTCTTTCCCGATTTTGACAAC GGCCAACGGCAGTACACCGTCGGAAGCGATACTGCGGAGGGTGAGCCACTGGGGCTCAGGCAAATACAAGACTTC GTTCGAACAAAAGATCGTCCCTTTTCAAGGTTACATGGCGAACCTTGCGCATCGGTATCAATTGGCAACAATAGA AAGACTTCGTCGGGTAACGACTACAAATCTGAAGACACTCCTCTGGTCTTCGGTCGACGGAATTACAGCAGTAGC AAATGA |
Gene | >Hirsu2|2191 ATGAGCCCTCCTGTCAAGCCTTTCGTGTATATTTCCCAGGGGCCCGATTCGCGATTCCCCGCCACGACGTTTGAC CCCAAATCCGTCACGAGGGCTAGCTGGAAGCCTAAGCTCATGAAACCCCCGCGTTGTGGGCCCTTGATTTCGTTC AATCGACACCCAGAGTAGGTAGAAAGCTCAACCTGACCGAACAGCCTGCGACTCAAGCCAAACTGACAGCACTCC AGCTCTCATTCTGCGCCTCCACGACAGACACATCCGTACCTGCCTATTGGACCCCGTGCCAGGACTTGGATCAAA TGGGTGCGGCGCGGGCAGCTGGTTCTGCGAGCTGTGCAGTTGACTGGTGCCTTGGGCATCCTGACTTTGATGGTC ATAATCCTAGGGCCGAGTGAAGCTACGGCTTGGGTTATGAGAATCACTGTGTGTTTTTGCTCCTTCCATGGGTTT TTTAGATCTACCGCTAACTTGGTTGCTGTAACTAGCCTGGGATTTCCGTCATACACTGCCTTTACGCCACATACC ACCTTGCACGAAACGCTGCCGCTCGTACGCCCGCCACTTCTGCGGCCTATCAAGCTTTTGCGGTCATGCTGGACC TCTCTGTTGTGAGCCTGTACACGTACGGAGCCTTTTCTGCGCATCAGCAGATGAGCTCTTGGTATACGAGATTCA GCAGCCAGGACGCCACGCCTCATCTCACATTGGCTGTCTATTACCTCCTCATTGGCACTGGGACCCTGCATCTAG TTTCAATCTCAGTTTCACTGTGGCTGGCTCTGACGTTTCGAAAAATTAGTCTCATGCCGCCTGATGTGAACCCTT TAGAGGGCAACTTGATCACACGGTCCCTTCACAAAGGAAACGAATCCTCAGTAACATCAATAAGCACCGCTAAGA ATTACAAGGTGCTTTCGACAGTTCGTCTACAGAAGAGCAACACCTCAACTAGTTCATATCAGGGCGATCGTACGC TTCTCTGCATCCCCTTCAAGTACACAAGGGCAGGGGCAACCTATCCGCCATCGACCCCAGAAGATCCACAGTTCC ATCTCCCAGCTGGACACTGTCTACCCCATCACGACACCTCGTCCCAAACCCAGCTCTCTTGTATTAGTCGGCAAA GGGTAACGTCAAGGTCCAGCGGGGGCAAGGACAGATTATGCACGGAACTGCTGGTTGTGGACTCCAGCTCGCCGT CTCGTTGCGCCGTTTCCACTGCTCCCCGCAGACCCAAGTTCACCGAGACGTTGCAACCCCCAGATTCACACATCT CGAGGGCTAATCGCCTATTCTTCATCCCCGGAACTGCGCCGGATTATTCCGCCTTGCCACAGCACTGCAGTTCTC CCGAGGTGTGTGACTCAGAGGAGGAGGATGTATACAACCCTAAAAGTGATAAGACCTCGTTGAGGTTGCACCCTA ATCCCCTCCGCTTGCACCCAACACGGAATGCACTGTGTTTGTCAATTGATGTCAGCACGTCGGTACGTTCACTGG ATAGCTGCGTTACTAAAGACGAGCTCAATCTCTTTCCCGATTTTGACAACGGCCAACGGCAGTACACCGTCGGAA GCGATACTGCGGAGGGTGAGCCACTGGGGCTCAGGCAAATACAAGACTTCGTTCGAACAAAAGATCGTCCCTTTT CAAGGTTACATGGCGAACCTTGCGCATCGGTATCAATTGGCAACAATAGAAAGACTTCGTCGGGTAACGACTACA AATCTGAAGACACTCCTCTGGTCTTCGGTCGACGGAATTACAGCAGTAGCAAATGA |