Protein ID | Hirsu2|2185 |
Gene name | |
Location | Contig_1506:446..1255 |
Strand | + |
Gene length (bp) | 809 |
Transcript length (bp) | 483 |
Coding sequence length (bp) | 483 |
Protein length (aa) | 161 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm|Nucleus | Nuclear localization signal|Nuclear export signal | 0.5806 | 0.5851 | 0.0204 | 0.0268 | 0.1031 | 0.0087 | 0.0833 | 0.1138 | 0.2279 | 0.0011 |
Orthofinder run ID | 4 |
Orthogroup | 1984 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2185 MWQFANLCQWIYIFGRAAKIDESIDVEDIENECLKHNSAFLANLALSFLKLVSSHRGLTHEILDDQLRKLYLTRA PASTLLGDEENPHTFCSLDIFAKIKVLQQLTQWAMLYPEKLRDKMEEQKDTEQTTWRIEPYGWDRQDRTYYVLDD NRENWVRDDA* |
Coding | >Hirsu2|2185 ATGTGGCAGTTCGCCAATCTATGCCAATGGATCTATATTTTTGGTCGAGCTGCCAAGATCGACGAGTCCATTGAT GTCGAGGACATCGAGAATGAGTGTCTCAAGCATAACTCGGCCTTCCTGGCCAACCTGGCCCTCTCGTTTCTCAAG CTCGTGTCATCCCATCGTGGCCTCACTCATGAAATACTCGACGACCAGTTACGCAAGCTATATCTCACGAGGGCG CCCGCAAGCACTTTGCTAGGCGACGAGGAGAATCCCCACACATTCTGTAGCTTGGACATTTTCGCCAAAATCAAA GTTCTGCAGCAGCTGACCCAGTGGGCCATGCTATACCCCGAGAAACTCCGCGACAAAATGGAGGAACAGAAGGAC ACCGAACAAACTACCTGGCGAATCGAACCCTACGGCTGGGACCGGCAGGATCGCACCTACTACGTGCTGGATGAC AATCGGGAAAATTGGGTCCGCGACGACGCGTGA |
Transcript | >Hirsu2|2185 ATGTGGCAGTTCGCCAATCTATGCCAATGGATCTATATTTTTGGTCGAGCTGCCAAGATCGACGAGTCCATTGAT GTCGAGGACATCGAGAATGAGTGTCTCAAGCATAACTCGGCCTTCCTGGCCAACCTGGCCCTCTCGTTTCTCAAG CTCGTGTCATCCCATCGTGGCCTCACTCATGAAATACTCGACGACCAGTTACGCAAGCTATATCTCACGAGGGCG CCCGCAAGCACTTTGCTAGGCGACGAGGAGAATCCCCACACATTCTGTAGCTTGGACATTTTCGCCAAAATCAAA GTTCTGCAGCAGCTGACCCAGTGGGCCATGCTATACCCCGAGAAACTCCGCGACAAAATGGAGGAACAGAAGGAC ACCGAACAAACTACCTGGCGAATCGAACCCTACGGCTGGGACCGGCAGGATCGCACCTACTACGTGCTGGATGAC AATCGGGAAAATTGGGTCCGCGACGACGCGTGA |
Gene | >Hirsu2|2185 ATGTGGCAGTTCGCCAATCTATGCCAATGGATCTATATTTTTGGTCGAGCTGCCAAGATCGACGAGTCCATTGAT GTCGAGGTTCGTTCTTCGCTCACCTACCCGCGTCCATCAGCGAAGACTCCGTCTTGGTCCTGACGCGTCCCACAA GGACATCGAGAATGAGTGTCTCAAGCATAACTCGGCCTTCCTGGCCAACCTGGCCCTCTCGTTTCTCAAGCTCGT GTCATCCCATCGTGGCCTCACGTACGACATATTCCCCTCGAAAGTCCTACATAACCATCTGGATAAGTTGACTAA ATCAACCAGTCATGAAATACTCGACGACCAGTTACGCAAGCTATATCTCACGAGGGCGCCCGCAAGCACTTTGCT AGGCGACGAGGAGAATCCCCACACATTCTGTAGCTTGGACATTTTCGCCAAAGTGCGAGGCTCTGCCTTCCGATC GCCTTTCCTGCTCCGCCAACTTGGCTAATACGGGTCCTGGATAGATCAAAGTTCTGCAGCAGCTGACCCAGTGGG CCATGCTATACCCCGAGAAACTCCGCGACAAAATGGAGGAACAGAAGGACACCGAACAAACTACCTGGGTAGTCG ATCTCTTCGATTCACTGGATGACAGAATGCTGACTGATGTCTTGAAAAGCGAATCGAACCCTACGGCTGGGACCG GCAGGATCGCACCTACTACGTGCTGGATGACAATCGGGTGTATCGCTTGAGCGAGCTGGCTCCCGTGCAACCCCG ACCGAAGTCAAAAGTAAAATGCGGACGACAAGGAAAATTGGGTCCGCGACGACGCGTGA |