Protein ID | Hirsu2|2182 |
Gene name | |
Location | Contig_1505:153..902 |
Strand | + |
Gene length (bp) | 749 |
Transcript length (bp) | 447 |
Coding sequence length (bp) | 447 |
Protein length (aa) | 149 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13649 | Methyltransf_25 | Methyltransferase domain | 2.8E-07 | 49 | 141 |
PF13847 | Methyltransf_31 | Methyltransferase domain | 1.3E-06 | 45 | 118 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | 0.5666 | 0.4081 | 0.0268 | 0.2397 | 0.3985 | 0.0096 | 0.1157 | 0.4566 | 0.1821 | 0.0134 |
Orthofinder run ID | 4 |
Orthogroup | 404 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2182 MKVKGDDDSYVLDRGLNESIRLDAQHLLWSMHLGYSLHPLIDVRDGMQIADLGCGTGIWLMDVARALPDTVRLHG LDISDQQFPARELWPANLTFSALDAFAAAPPAELQARFDVVHLGMWTSIPKARGVDALVDNVKMMLSKDDQRR* |
Coding | >Hirsu2|2182 ATGAAGGTCAAAGGTGACGATGACTCGTACGTGCTGGACCGCGGCCTGAACGAGTCGATCCGGCTCGACGCGCAG CACCTGCTCTGGTCCATGCACCTGGGCTACAGTCTCCACCCGCTGATCGACGTCCGCGACGGGATGCAAATCGCC GACCTCGGCTGCGGGACCGGCATCTGGCTCATGGACGTGGCGCGCGCGCTGCCCGACACGGTGCGCCTGCACGGG CTCGACATCTCAGACCAGCAGTTCCCGGCGCGCGAGCTGTGGCCGGCAAACCTGACGTTCAGCGCCCTTGACGCC TTCGCGGCCGCGCCGCCGGCTGAGCTGCAAGCCCGCTTCGACGTCGTCCACCTCGGCATGTGGACTAGCATCCCC AAGGCGCGGGGTGTCGACGCGCTCGTCGACAACGTCAAGATGATGCTCAGTAAGGACGACCAGCGGCGCTAG |
Transcript | >Hirsu2|2182 ATGAAGGTCAAAGGTGACGATGACTCGTACGTGCTGGACCGCGGCCTGAACGAGTCGATCCGGCTCGACGCGCAG CACCTGCTCTGGTCCATGCACCTGGGCTACAGTCTCCACCCGCTGATCGACGTCCGCGACGGGATGCAAATCGCC GACCTCGGCTGCGGGACCGGCATCTGGCTCATGGACGTGGCGCGCGCGCTGCCCGACACGGTGCGCCTGCACGGG CTCGACATCTCAGACCAGCAGTTCCCGGCGCGCGAGCTGTGGCCGGCAAACCTGACGTTCAGCGCCCTTGACGCC TTCGCGGCCGCGCCGCCGGCTGAGCTGCAAGCCCGCTTCGACGTCGTCCACCTCGGCATGTGGACTAGCATCCCC AAGGCGCGGGGTGTCGACGCGCTCGTCGACAACGTCAAGATGATGCTCAGTAAGGACGACCAGCGGCGCTAG |
Gene | >Hirsu2|2182 ATGAAGGTCAAAGGTGACGATGACTCGTACGTGCTGGACCGCGGCCTGAACGAGTCGATCCGGTAAAACCCCCCC CCCTCTGGGAAACCCGCAGCCAACGCTGACCCGCCACCAGGCTCGACGCGCAGCACCTGCTCTGGTCCATGCACC TGGGCTACAGTCTCCACCCGCTGATCGACGTCCGCGACGGGATGCAAATCGCCGACCTCGGCTGCGGGACCGGGT AAGTCCGTCCAGAAAGCGGGCCGCCGTCCTCGCCCGTCGGGCTAACGACCGGGGTGGGGAACACGGGGGGAGCCG GGCGTCGAACCCGGAACCGAAAAAAACCCCGATGTGAATAGCATCTGGCTCATGGACGTGGCGCGCGCGCTGCCC GACACGGTGCGCCTGCACGGGCTCGACATCTCAGACCAGCAGTTCCCGGCGCGCGAGCTGTGGCCGGCAAACCTG ACGTTCAGCGCCCTTGACGCCTTCGCGGCCGCGCCGCCGGCTGAGCTGCAAGCCCGCTTCGACGTCGTCCACCTC GGCATGTGGACTAGCATCCCCAAGGCGCGGGGTGTCGACGCGCTCGTCGACAACGTCAAGATGATGCTCAGTAAG GACGACGTCTTCTTTTTCTTCTTTTTCTTCTTCTCCCCTTCTCTCCTCCTTCCTTGCTTTTTCCACTCATTCTTC TCCTCCTTCTTTTCCTTCTTTCCGCGCCCCCGTCCGCCTTGCTGGTTCTGGCTGTTCTGCAGCAGCGGCGCTAG |