© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|2181 |
| Gene name | |
| Location | Contig_1504:3459..4833 |
| Strand | - |
| Gene length (bp) | 1374 |
| Transcript length (bp) | 1374 |
| Coding sequence length (bp) | 1374 |
| Protein length (aa) | 458 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q12232|SLP1_YEAST | Uncharacterized protein SLP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SLP1 PE=1 SV=1 | 167 | 342 | 9.0E-09 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Endoplasmic reticulum|Golgi apparatus | Signal peptide|Transmembrane domain | 0.1654 | 0.1798 | 0.0196 | 0.0951 | 0.0561 | 0.0099 | 0.7689 | 0.2715 | 0.8341 | 0.0541 |
| Orthofinder run ID | 4 |
| Orthogroup | 6057 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2181 MIVRDDAPLLASISTTEEASKDTLSTTGITPWLGQLDDPLDPRFATCRASEIPDTYITKASHCLGNITQDAAQQP SAATDEQQGQTPLPNSSYADDEEITSAAPFTVSANCSATLPCVGLNPIHNLTTAGDIDSVGGNESSQEHGRNITA ATASKPSVTGATSGKTRMSGVTGSAAGPVAVQEGFFNAISKRLQQVESNLTLSLRYVEEQSRHLQDALRRGKLKQ ESEVTFFLDGINRTVLSELHGMREQYNEIWQSTVLALESQADRSERDMMALSTRLNLLADEVVFQKRMAIAQAII LLSCLFLVIFSRGVPVPYLAPVPVQADASVCAAVDGSDASQQNNRRALHRSHLWDTVTQQGPQIGLIPLPFKANE ELASCSPSVHSSPSSHPKAGQSEPSVSCPPRASALRDQRRASQMPALRGSESSSTYPLPCLSQPNSRKPLPSLPE HPSSSHE* |
| Coding | >Hirsu2|2181 ATGATAGTTCGAGATGACGCACCCTTACTAGCGTCTATTTCGACGACAGAAGAGGCTAGCAAGGACACGCTTTCT ACAACAGGCATCACGCCGTGGCTCGGACAGCTGGACGATCCTTTGGACCCTCGATTTGCGACTTGTCGTGCCAGC GAGATTCCGGACACCTATATCACCAAGGCAAGCCATTGCCTAGGTAATATTACCCAAGACGCAGCTCAACAGCCC TCAGCTGCCACAGATGAACAGCAGGGTCAGACCCCCCTACCCAACTCCTCGTATGCGGATGACGAAGAAATTACA TCGGCCGCGCCATTTACAGTCTCTGCGAATTGTTCTGCCACTCTTCCGTGCGTGGGTCTGAACCCCATCCACAAC TTGACCACCGCTGGCGACATTGACTCAGTTGGTGGAAATGAATCCAGCCAGGAGCATGGTAGAAACATCACTGCG GCGACAGCAAGTAAGCCATCAGTGACGGGAGCTACGAGTGGCAAGACGCGGATGAGCGGGGTCACTGGCTCGGCT GCTGGACCCGTTGCGGTACAGGAGGGGTTTTTCAATGCCATCAGCAAACGCCTCCAACAAGTAGAATCGAATCTT ACACTTTCTCTCAGATATGTCGAGGAGCAGTCTCGGCACCTGCAAGACGCCTTACGAAGGGGCAAGCTGAAGCAA GAATCTGAAGTCACTTTTTTCCTCGACGGCATCAACAGAACGGTACTTTCAGAGCTTCACGGCATGCGTGAGCAG TATAATGAGATCTGGCAGTCAACTGTCCTTGCCTTAGAGAGTCAGGCAGACCGGTCTGAGCGGGACATGATGGCC CTAAGTACCCGGCTGAACCTCTTGGCGGACGAGGTTGTATTCCAAAAACGGATGGCTATTGCGCAGGCCATCATC CTACTCTCGTGTCTTTTCCTCGTTATTTTCTCGAGGGGGGTTCCTGTACCATACCTCGCTCCAGTGCCAGTCCAA GCCGACGCCAGTGTCTGTGCCGCAGTCGATGGGTCTGACGCCTCCCAGCAGAACAACCGCCGCGCGCTTCATCGG AGTCATTTATGGGATACGGTCACCCAACAGGGCCCTCAAATTGGGCTAATCCCACTTCCCTTCAAAGCAAATGAA GAGTTGGCTTCTTGTTCTCCCTCAGTGCATTCCTCCCCCTCAAGCCACCCTAAGGCCGGTCAGTCAGAGCCTAGC GTCTCATGTCCGCCCCGTGCTTCAGCTCTGCGTGACCAGCGCAGGGCCTCACAGATGCCAGCCCTTCGCGGCTCA GAAAGCTCGTCCACATATCCATTGCCGTGCTTGTCTCAACCGAACTCACGCAAACCACTTCCTTCCCTCCCGGAA CACCCTTCTTCATCCCACGAGTAA |
| Transcript | >Hirsu2|2181 ATGATAGTTCGAGATGACGCACCCTTACTAGCGTCTATTTCGACGACAGAAGAGGCTAGCAAGGACACGCTTTCT ACAACAGGCATCACGCCGTGGCTCGGACAGCTGGACGATCCTTTGGACCCTCGATTTGCGACTTGTCGTGCCAGC GAGATTCCGGACACCTATATCACCAAGGCAAGCCATTGCCTAGGTAATATTACCCAAGACGCAGCTCAACAGCCC TCAGCTGCCACAGATGAACAGCAGGGTCAGACCCCCCTACCCAACTCCTCGTATGCGGATGACGAAGAAATTACA TCGGCCGCGCCATTTACAGTCTCTGCGAATTGTTCTGCCACTCTTCCGTGCGTGGGTCTGAACCCCATCCACAAC TTGACCACCGCTGGCGACATTGACTCAGTTGGTGGAAATGAATCCAGCCAGGAGCATGGTAGAAACATCACTGCG GCGACAGCAAGTAAGCCATCAGTGACGGGAGCTACGAGTGGCAAGACGCGGATGAGCGGGGTCACTGGCTCGGCT GCTGGACCCGTTGCGGTACAGGAGGGGTTTTTCAATGCCATCAGCAAACGCCTCCAACAAGTAGAATCGAATCTT ACACTTTCTCTCAGATATGTCGAGGAGCAGTCTCGGCACCTGCAAGACGCCTTACGAAGGGGCAAGCTGAAGCAA GAATCTGAAGTCACTTTTTTCCTCGACGGCATCAACAGAACGGTACTTTCAGAGCTTCACGGCATGCGTGAGCAG TATAATGAGATCTGGCAGTCAACTGTCCTTGCCTTAGAGAGTCAGGCAGACCGGTCTGAGCGGGACATGATGGCC CTAAGTACCCGGCTGAACCTCTTGGCGGACGAGGTTGTATTCCAAAAACGGATGGCTATTGCGCAGGCCATCATC CTACTCTCGTGTCTTTTCCTCGTTATTTTCTCGAGGGGGGTTCCTGTACCATACCTCGCTCCAGTGCCAGTCCAA GCCGACGCCAGTGTCTGTGCCGCAGTCGATGGGTCTGACGCCTCCCAGCAGAACAACCGCCGCGCGCTTCATCGG AGTCATTTATGGGATACGGTCACCCAACAGGGCCCTCAAATTGGGCTAATCCCACTTCCCTTCAAAGCAAATGAA GAGTTGGCTTCTTGTTCTCCCTCAGTGCATTCCTCCCCCTCAAGCCACCCTAAGGCCGGTCAGTCAGAGCCTAGC GTCTCATGTCCGCCCCGTGCTTCAGCTCTGCGTGACCAGCGCAGGGCCTCACAGATGCCAGCCCTTCGCGGCTCA GAAAGCTCGTCCACATATCCATTGCCGTGCTTGTCTCAACCGAACTCACGCAAACCACTTCCTTCCCTCCCGGAA CACCCTTCTTCATCCCACGAGTAA |
| Gene | >Hirsu2|2181 ATGATAGTTCGAGATGACGCACCCTTACTAGCGTCTATTTCGACGACAGAAGAGGCTAGCAAGGACACGCTTTCT ACAACAGGCATCACGCCGTGGCTCGGACAGCTGGACGATCCTTTGGACCCTCGATTTGCGACTTGTCGTGCCAGC GAGATTCCGGACACCTATATCACCAAGGCAAGCCATTGCCTAGGTAATATTACCCAAGACGCAGCTCAACAGCCC TCAGCTGCCACAGATGAACAGCAGGGTCAGACCCCCCTACCCAACTCCTCGTATGCGGATGACGAAGAAATTACA TCGGCCGCGCCATTTACAGTCTCTGCGAATTGTTCTGCCACTCTTCCGTGCGTGGGTCTGAACCCCATCCACAAC TTGACCACCGCTGGCGACATTGACTCAGTTGGTGGAAATGAATCCAGCCAGGAGCATGGTAGAAACATCACTGCG GCGACAGCAAGTAAGCCATCAGTGACGGGAGCTACGAGTGGCAAGACGCGGATGAGCGGGGTCACTGGCTCGGCT GCTGGACCCGTTGCGGTACAGGAGGGGTTTTTCAATGCCATCAGCAAACGCCTCCAACAAGTAGAATCGAATCTT ACACTTTCTCTCAGATATGTCGAGGAGCAGTCTCGGCACCTGCAAGACGCCTTACGAAGGGGCAAGCTGAAGCAA GAATCTGAAGTCACTTTTTTCCTCGACGGCATCAACAGAACGGTACTTTCAGAGCTTCACGGCATGCGTGAGCAG TATAATGAGATCTGGCAGTCAACTGTCCTTGCCTTAGAGAGTCAGGCAGACCGGTCTGAGCGGGACATGATGGCC CTAAGTACCCGGCTGAACCTCTTGGCGGACGAGGTTGTATTCCAAAAACGGATGGCTATTGCGCAGGCCATCATC CTACTCTCGTGTCTTTTCCTCGTTATTTTCTCGAGGGGGGTTCCTGTACCATACCTCGCTCCAGTGCCAGTCCAA GCCGACGCCAGTGTCTGTGCCGCAGTCGATGGGTCTGACGCCTCCCAGCAGAACAACCGCCGCGCGCTTCATCGG AGTCATTTATGGGATACGGTCACCCAACAGGGCCCTCAAATTGGGCTAATCCCACTTCCCTTCAAAGCAAATGAA GAGTTGGCTTCTTGTTCTCCCTCAGTGCATTCCTCCCCCTCAAGCCACCCTAAGGCCGGTCAGTCAGAGCCTAGC GTCTCATGTCCGCCCCGTGCTTCAGCTCTGCGTGACCAGCGCAGGGCCTCACAGATGCCAGCCCTTCGCGGCTCA GAAAGCTCGTCCACATATCCATTGCCGTGCTTGTCTCAACCGAACTCACGCAAACCACTTCCTTCCCTCCCGGAA CACCCTTCTTCATCCCACGAGTAA |