© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2176 |
| Gene name | |
| Location | Contig_1502:5056..5912 |
| Strand | - |
| Gene length (bp) | 856 |
| Transcript length (bp) | 795 |
| Coding sequence length (bp) | 795 |
| Protein length (aa) | 265 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14032|YEMB_SCHPO | UPF0664 stress-induced protein C29B12.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC29B12.11c PE=2 SV=1 | 26 | 193 | 2.0E-10 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | Nuclear export signal | 0.7238 | 0.509 | 0.1365 | 0.2131 | 0.0648 | 0.0014 | 0.2955 | 0.4481 | 0.1811 | 0.0348 |
| Orthofinder run ID | 4 |
| Orthogroup | 1980 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2176 MDNPHDFLITGRAAPRRPVDPDNADSWVMLNQSGFVKLGNERILQKLESRISCELSVPQELRARCTPFQRKSDKG TLFLTNKRIVYLPAKPSQEPRFESFSAPILKFQDSSTSSSMLWGWVWKSDCIPVSGGGIPPDLPRIEVKFTFSDG GMMDFNEAYIRLRERLFQYQEMRREAGPGADIPDEPLPAYEAPGIQAAEAAATQAAEPSATLAAAPRNNRSDSTA SRRAPDEPPPNYDEAQAQQLSMRLEDHIREEADRGDRAE* |
| Coding | >Hirsu2|2176 ATGGACAACCCTCATGACTTCCTAATCACGGGCCGAGCCGCCCCCCGACGACCAGTCGATCCTGACAATGCCGAC AGCTGGGTGATGCTCAACCAGAGCGGCTTCGTCAAGCTCGGAAACGAACGCATCCTCCAGAAGCTCGAGTCCCGG ATATCATGCGAGCTATCCGTCCCCCAGGAGCTGCGAGCCCGCTGCACGCCCTTCCAGCGGAAAAGTGACAAGGGC ACCCTATTCCTGACCAACAAGAGGATCGTCTACCTGCCCGCCAAGCCCAGCCAGGAGCCGAGGTTCGAGTCCTTC AGCGCGCCCATCCTCAAGTTCCAGGACTCCAGCACCTCCTCCTCCATGCTGTGGGGTTGGGTCTGGAAGTCGGAC TGCATACCCGTCTCGGGAGGCGGCATCCCCCCCGACCTGCCGCGGATCGAGGTCAAGTTCACCTTCTCCGACGGC GGCATGATGGACTTTAACGAGGCCTACATCCGCCTGCGCGAACGCCTCTTCCAGTACCAGGAGATGCGCAGGGAA GCCGGGCCCGGCGCTGACATCCCGGACGAGCCGCTGCCGGCGTACGAGGCGCCGGGGATCCAGGCGGCCGAGGCG GCGGCTACCCAGGCGGCCGAGCCCTCGGCGACGCTCGCCGCCGCGCCGCGGAACAACCGGTCGGATAGCACCGCC AGCCGCCGCGCCCCGGACGAGCCGCCGCCCAACTACGACGAGGCTCAGGCGCAGCAGCTGAGCATGCGGCTGGAG GACCACATCCGGGAAGAGGCGGACAGAGGGGATCGAGCCGAGTGA |
| Transcript | >Hirsu2|2176 ATGGACAACCCTCATGACTTCCTAATCACGGGCCGAGCCGCCCCCCGACGACCAGTCGATCCTGACAATGCCGAC AGCTGGGTGATGCTCAACCAGAGCGGCTTCGTCAAGCTCGGAAACGAACGCATCCTCCAGAAGCTCGAGTCCCGG ATATCATGCGAGCTATCCGTCCCCCAGGAGCTGCGAGCCCGCTGCACGCCCTTCCAGCGGAAAAGTGACAAGGGC ACCCTATTCCTGACCAACAAGAGGATCGTCTACCTGCCCGCCAAGCCCAGCCAGGAGCCGAGGTTCGAGTCCTTC AGCGCGCCCATCCTCAAGTTCCAGGACTCCAGCACCTCCTCCTCCATGCTGTGGGGTTGGGTCTGGAAGTCGGAC TGCATACCCGTCTCGGGAGGCGGCATCCCCCCCGACCTGCCGCGGATCGAGGTCAAGTTCACCTTCTCCGACGGC GGCATGATGGACTTTAACGAGGCCTACATCCGCCTGCGCGAACGCCTCTTCCAGTACCAGGAGATGCGCAGGGAA GCCGGGCCCGGCGCTGACATCCCGGACGAGCCGCTGCCGGCGTACGAGGCGCCGGGGATCCAGGCGGCCGAGGCG GCGGCTACCCAGGCGGCCGAGCCCTCGGCGACGCTCGCCGCCGCGCCGCGGAACAACCGGTCGGATAGCACCGCC AGCCGCCGCGCCCCGGACGAGCCGCCGCCCAACTACGACGAGGCTCAGGCGCAGCAGCTGAGCATGCGGCTGGAG GACCACATCCGGGAAGAGGCGGACAGAGGGGATCGAGCCGAGTGA |
| Gene | >Hirsu2|2176 ATGGACAACCCTCATGACTTCCTAATCACGGGCCGAGCCGCCCCCCGACGACCAGTCGATCCTGACAATGCCGAC AGCTGGGTGATGCTCAACCAGAGCGGCTTCGTCAAGCTCGGAAACGAACGCATCCTCCAGAAGCTCGAGTCCCGG ATATCATGCGAGCTATCCGTCCCCCAGGAGCTGCGAGCCCGCTGCACGCCCTTCCAGCGGAAAAGTGACAAGGGC ACCCTATTCCTGACCAACAAGAGGGTCGGTTCTCCCCGTCGCCCGCCCGTCCGCCCGCCCGCCTTCGCTGATGCA GTCTGCCCAGATCGTCTACCTGCCCGCCAAGCCCAGCCAGGAGCCGAGGTTCGAGTCCTTCAGCGCGCCCATCCT CAAGTTCCAGGACTCCAGCACCTCCTCCTCCATGCTGTGGGGTTGGGTCTGGAAGTCGGACTGCATACCCGTCTC GGGAGGCGGCATCCCCCCCGACCTGCCGCGGATCGAGGTCAAGTTCACCTTCTCCGACGGCGGCATGATGGACTT TAACGAGGCCTACATCCGCCTGCGCGAACGCCTCTTCCAGTACCAGGAGATGCGCAGGGAAGCCGGGCCCGGCGC TGACATCCCGGACGAGCCGCTGCCGGCGTACGAGGCGCCGGGGATCCAGGCGGCCGAGGCGGCGGCTACCCAGGC GGCCGAGCCCTCGGCGACGCTCGCCGCCGCGCCGCGGAACAACCGGTCGGATAGCACCGCCAGCCGCCGCGCCCC GGACGAGCCGCCGCCCAACTACGACGAGGCTCAGGCGCAGCAGCTGAGCATGCGGCTGGAGGACCACATCCGGGA AGAGGCGGACAGAGGGGATCGAGCCGAGTGA |