Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2175
Gene name
LocationContig_1502:3504..4264
Strand-
Gene length (bp)760
Transcript length (bp)429
Coding sequence length (bp)429
Protein length (aa) 143

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02320 UCR_hinge Ubiquinol-cytochrome C reductase hinge protein 5.3E-28 76 142

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|O42932|QCR6_SCHPO Cytochrome b-c1 complex subunit 6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=qcr6 PE=3 SV=1 74 141 3.0E-18
sp|P00127|QCR6_YEAST Cytochrome b-c1 complex subunit 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QCR6 PE=1 SV=2 74 142 1.0E-12
sp|P07919|QCR6_HUMAN Cytochrome b-c1 complex subunit 6, mitochondrial OS=Homo sapiens GN=UQCRH PE=1 SV=2 73 142 2.0E-07
sp|P48504|QCR6_SOLTU Cytochrome b-c1 complex subunit 6 OS=Solanum tuberosum PE=1 SV=2 71 142 2.0E-07
sp|P00126|QCR6_BOVIN Cytochrome b-c1 complex subunit 6, mitochondrial OS=Bos taurus GN=UQCRH PE=1 SV=2 73 142 8.0E-07
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O42932|QCR6_SCHPO Cytochrome b-c1 complex subunit 6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=qcr6 PE=3 SV=1 74 141 3.0E-18
sp|P00127|QCR6_YEAST Cytochrome b-c1 complex subunit 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QCR6 PE=1 SV=2 74 142 1.0E-12
sp|P07919|QCR6_HUMAN Cytochrome b-c1 complex subunit 6, mitochondrial OS=Homo sapiens GN=UQCRH PE=1 SV=2 73 142 2.0E-07
sp|P48504|QCR6_SOLTU Cytochrome b-c1 complex subunit 6 OS=Solanum tuberosum PE=1 SV=2 71 142 2.0E-07
sp|P00126|QCR6_BOVIN Cytochrome b-c1 complex subunit 6, mitochondrial OS=Bos taurus GN=UQCRH PE=1 SV=2 73 142 8.0E-07
sp|Q5M9I5|QCR6_RAT Cytochrome b-c1 complex subunit 6, mitochondrial OS=Rattus norvegicus GN=Uqcrh PE=3 SV=1 73 142 1.0E-06
sp|P99028|QCR6_MOUSE Cytochrome b-c1 complex subunit 6, mitochondrial OS=Mus musculus GN=Uqcrh PE=1 SV=2 73 142 1.0E-06
sp|Q8SPH5|QCR6_MACFA Cytochrome b-c1 complex subunit 6, mitochondrial OS=Macaca fascicularis GN=UQCRH PE=3 SV=1 73 142 2.0E-06
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GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Mitochondrion Mitochondrial transit peptide|Peroxisomal targeting signal 0.277 0.1877 0.1897 0.0958 0.8549 0.1349 0.4794 0.2794 0.5136 0.2133

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6056
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis map64 (Brazil) OphauB2|5343
Ophiocordyceps camponoti-floridani Ophcf2|01435
Ophiocordyceps kimflemingae Ophio5|6875
Ophiocordyceps subramaniannii Hirsu2|2175 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2175
MGIWDTVSDMVEAAMPWSVVEAEAPSDEPKEESASETKDKDDEASTEGEEASEEKEEEEEEEEDEEEEEEEEEIV
DPKETLEEECKNSPQCAPAKHHFDECVERVQQQESEGEAKEDCVEEFFHLAHCASACAAPKLWSKLK*
Coding >Hirsu2|2175
ATGGGTATCTGGGACACCGTTTCCGACATGGTCGAGGCCGCGATGCCGTGGAGCGTCGTCGAGGCCGAAGCTCCC
TCCGACGAGCCCAAGGAGGAGTCGGCTTCCGAGACGAAGGACAAGGACGACGAAGCCTCGACGGAGGGCGAAGAG
GCCAGCGAGGAGAAGGAGGAAGAGGAAGAGGAGGAGGAGGATGAGGAGGAGGAGGAGGAGGAGGAAGAGATTGTC
GATCCCAAAGAGACGCTCGAGGAAGAGTGCAAGAACTCTCCGCAGTGCGCCCCCGCCAAGCACCACTTTGACGAG
TGCGTGGAGCGTGTGCAGCAGCAGGAGAGCGAGGGCGAGGCCAAGGAGGACTGCGTCGAAGAGTTCTTCCACCTC
GCCCACTGCGCCAGCGCATGCGCCGCCCCGAAACTCTGGTCCAAGCTCAAGTAG
Transcript >Hirsu2|2175
ATGGGTATCTGGGACACCGTTTCCGACATGGTCGAGGCCGCGATGCCGTGGAGCGTCGTCGAGGCCGAAGCTCCC
TCCGACGAGCCCAAGGAGGAGTCGGCTTCCGAGACGAAGGACAAGGACGACGAAGCCTCGACGGAGGGCGAAGAG
GCCAGCGAGGAGAAGGAGGAAGAGGAAGAGGAGGAGGAGGATGAGGAGGAGGAGGAGGAGGAGGAAGAGATTGTC
GATCCCAAAGAGACGCTCGAGGAAGAGTGCAAGAACTCTCCGCAGTGCGCCCCCGCCAAGCACCACTTTGACGAG
TGCGTGGAGCGTGTGCAGCAGCAGGAGAGCGAGGGCGAGGCCAAGGAGGACTGCGTCGAAGAGTTCTTCCACCTC
GCCCACTGCGCCAGCGCATGCGCCGCCCCGAAACTCTGGTCCAAGCTCAAGTAG
Gene >Hirsu2|2175
ATGGGTATCTGGGACACCGTTTCCGACATGGTCGAGGCCGCGATGCCGTGGAGCGTCGTCGAGGCCGAAGCTCCC
TCCGACGAGCCCAAGGTGCGGAGCATCCGAGCCGTTGGCACCCTTCCGAGCGCTTGAGCGGGCACCTCGGGCCAA
CCCCCCCATTCCCCTATTCTACCTCACGGATGATTTTCTGACAGGGTCTGATGCAGGAGGAGTCGGCTTCCGAGA
CGAAGGACAAGGACGACGAAGCCTCGACGGAGGGCGAAGAGGCCAGCGAGGAGAAGGAGGAAGAGGAAGAGGAGG
AGGAGGATGAGGAGGAGGAGGAGGAGGAGGAAGAGATTGTCGATCCCAAAGAGACGCTCGAGGAAGGTTGGTCAC
GCCCTTGACTCTATTCCCGCAACGAGCGCGGAGACGGTGCCCACCCGTGGGTGTCCACGTCGCTCGCCGTCGGGC
ACGAATGGCTGACGGCTTGACGGAACGGCAGAGTGCAAGAACTCTCCGCAGTGCGCCCCCGCCAAGCACCACTTT
GACGAGTGCGTGGAGCGTGTGCAGCAGCAGGAGAGCGAGGGCGAGGCCAAGGAGGACTGCGTCGAAGAGTGTATG
CGAACCCCCCCCTCTCTCCTCTCCCCTTGGCCTGTTACTTGCTCTTGGACAAGGGTGTTCGTCGAGTTTGCGTCT
CGCTGACGACCCGTGAGCAGTCTTCCACCTCGCCCACTGCGCCAGCGCATGCGCCGCCCCGAAACTCTGGTCCAA
GCTCAAGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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