Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2173
Gene name
LocationContig_1501:3921..5787
Strand-
Gene length (bp)1866
Transcript length (bp)1797
Coding sequence length (bp)1797
Protein length (aa) 599

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04037 DUF382 Domain of unknown function (DUF382) 1.2E-59 155 281
PF04046 PSP PSP 1.5E-16 290 335

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9UUI3|SA145_SCHPO Pre-mRNA-splicing factor sap145 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sap145 PE=1 SV=1 5 383 3.0E-105
sp|Q13435|SF3B2_HUMAN Splicing factor 3B subunit 2 OS=Homo sapiens GN=SF3B2 PE=1 SV=2 59 574 2.0E-100
sp|Q02554|CUS1_YEAST Cold sensitive U2 snRNA suppressor 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CUS1 PE=1 SV=1 134 334 9.0E-49

GO

GO Term Description Terminal node
GO:0005634 nucleus Yes
GO:0043227 membrane-bounded organelle No
GO:0043226 organelle No
GO:0043231 intracellular membrane-bounded organelle No
GO:0043229 intracellular organelle No
GO:0005575 cellular_component No
GO:0110165 cellular anatomical entity No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.1675 0.9151 0.0583 0.0296 0.059 0.001 0.0692 0.0112 0.008 0.0108

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1979
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2447
Ophiocordyceps australis map64 (Brazil) OphauB2|2516
Ophiocordyceps camponoti-floridani Ophcf2|04296
Ophiocordyceps camponoti-rufipedis Ophun1|2113
Ophiocordyceps kimflemingae Ophio5|1391
Ophiocordyceps subramaniannii Hirsu2|2173 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2173
MAAPKMTKNQIRRAKRKELKKAQTEKHQREESTGAADYHQIAARSEDGEDDENVVRKLADTDLAITVETPSLDDE
LADDPAFATYKDIFTKFGAPLGEDDVAREANAGNQGSVFFDEDDDIPDEDENQLGKTKLSKKKRKQMKTLSVAEL
KAMVKHPEVIEWHDVSSADPRTLVQIKAQRNVVPVPTHWSLKREYLSSKRGIEKAPFRLPDFIAATGIAEMRDAV
LEKEAEQTLKQKQRARVQPKMGRLDIDYQKLYDAFFRFQTKPELTRYGEVYYEGKEAEVDYQHFRPGELGDATKE
ALGMPPGAPPPWLINQQRIGPPPSFPTLKIPGLNVPPPVGGTWGYHPGGWGKPPVDELNRPLYGGDVFGLNNQPV
AQPQPGPPELPAAEPVERNLWGELQPHEEEESEEEGEEEEDGSEEGSQEAVAEMGGTETPGGYASTLAHNQGVQT
SISGEMDLRKERPGYGTETPSGRSAFMVLREQKTQGGGSGLFGVGHQYDLSSTHHPTMPVLGAEDEGRKRKRPGD
VDVALDVDSLNQNDGISKDAVRQKFEEGRQKEGIGSNWKHDQELADMIAAESRKRQKTEQDRMDRRKEGRGKR*
Coding >Hirsu2|2173
ATGGCGGCCCCTAAAATGACCAAAAACCAGATACGGCGGGCCAAGAGGAAGGAGCTGAAAAAAGCCCAGACAGAG
AAGCATCAGCGGGAGGAATCTACTGGGGCTGCCGACTATCACCAGATAGCAGCGAGGTCCGAGGACGGAGAAGAC
GATGAAAACGTTGTCAGGAAGCTTGCAGACACCGACCTAGCCATTACCGTGGAAACCCCGTCCCTCGATGACGAA
CTCGCAGACGATCCCGCCTTTGCAACCTACAAAGACATTTTCACCAAGTTTGGCGCTCCTCTCGGAGAAGACGAC
GTTGCCAGAGAGGCAAATGCGGGCAATCAAGGGAGCGTCTTTTTCGATGAAGACGACGACATACCTGACGAGGAC
GAGAATCAGCTGGGCAAGACCAAGCTCTCCAAAAAGAAGCGCAAACAGATGAAGACACTGTCTGTCGCAGAGCTC
AAGGCCATGGTCAAGCACCCCGAGGTTATCGAGTGGCACGATGTCTCTTCGGCCGATCCCCGGACCCTCGTGCAG
ATCAAGGCCCAGCGTAACGTCGTCCCTGTTCCCACGCATTGGTCGCTGAAAAGAGAGTATCTGTCGTCCAAACGC
GGCATCGAGAAGGCCCCGTTCCGACTGCCCGACTTCATAGCCGCCACCGGCATTGCCGAAATGCGGGATGCTGTC
CTGGAAAAAGAAGCTGAGCAGACGCTCAAGCAGAAGCAGCGAGCCCGAGTCCAGCCGAAGATGGGAAGGCTTGAT
ATTGACTATCAGAAGCTCTACGATGCCTTCTTTCGGTTTCAGACCAAGCCAGAGCTGACCCGCTACGGTGAAGTA
TACTATGAGGGCAAAGAAGCCGAAGTTGACTACCAGCACTTCCGACCGGGAGAGTTGGGAGATGCGACCAAAGAG
GCGCTTGGCATGCCTCCTGGCGCTCCTCCGCCCTGGTTGATCAATCAGCAGCGTATCGGCCCTCCCCCTTCCTTC
CCGACCCTAAAAATTCCGGGTCTGAACGTCCCGCCCCCCGTCGGCGGCACATGGGGATATCACCCTGGCGGCTGG
GGGAAGCCTCCTGTCGACGAATTAAATCGTCCACTATATGGTGGCGATGTGTTCGGCTTGAACAACCAGCCGGTC
GCCCAACCCCAGCCTGGCCCGCCTGAGCTACCGGCGGCAGAACCCGTGGAGCGCAATCTCTGGGGCGAACTGCAG
CCACATGAGGAAGAAGAGTCGGAGGAAGAGGGAGAAGAGGAAGAGGATGGTAGCGAGGAAGGCTCCCAAGAAGCG
GTAGCCGAAATGGGGGGTACGGAAACGCCTGGAGGTTACGCCAGCACTCTGGCACACAACCAGGGTGTCCAAACA
TCCATATCCGGGGAGATGGATCTCCGAAAAGAGCGCCCTGGCTATGGCACAGAAACACCGTCTGGTCGTTCCGCC
TTCATGGTCCTCAGGGAGCAAAAGACTCAGGGTGGCGGAAGCGGTCTCTTCGGCGTCGGCCACCAATATGACTTG
AGCTCGACTCATCACCCGACGATGCCTGTCCTCGGCGCCGAGGACGAGGGCCGCAAGCGCAAAAGGCCAGGTGAC
GTGGATGTGGCCTTAGATGTCGATTCTCTGAACCAGAACGACGGCATCAGCAAGGACGCTGTTCGCCAGAAGTTC
GAGGAAGGTAGGCAGAAAGAGGGAATCGGGTCGAATTGGAAGCACGACCAGGAGCTAGCCGACATGATTGCTGCC
GAAAGCCGCAAACGCCAGAAGACGGAGCAGGATCGGATGGATCGTCGCAAGGAAGGACGGGGCAAACGCTGA
Transcript >Hirsu2|2173
ATGGCGGCCCCTAAAATGACCAAAAACCAGATACGGCGGGCCAAGAGGAAGGAGCTGAAAAAAGCCCAGACAGAG
AAGCATCAGCGGGAGGAATCTACTGGGGCTGCCGACTATCACCAGATAGCAGCGAGGTCCGAGGACGGAGAAGAC
GATGAAAACGTTGTCAGGAAGCTTGCAGACACCGACCTAGCCATTACCGTGGAAACCCCGTCCCTCGATGACGAA
CTCGCAGACGATCCCGCCTTTGCAACCTACAAAGACATTTTCACCAAGTTTGGCGCTCCTCTCGGAGAAGACGAC
GTTGCCAGAGAGGCAAATGCGGGCAATCAAGGGAGCGTCTTTTTCGATGAAGACGACGACATACCTGACGAGGAC
GAGAATCAGCTGGGCAAGACCAAGCTCTCCAAAAAGAAGCGCAAACAGATGAAGACACTGTCTGTCGCAGAGCTC
AAGGCCATGGTCAAGCACCCCGAGGTTATCGAGTGGCACGATGTCTCTTCGGCCGATCCCCGGACCCTCGTGCAG
ATCAAGGCCCAGCGTAACGTCGTCCCTGTTCCCACGCATTGGTCGCTGAAAAGAGAGTATCTGTCGTCCAAACGC
GGCATCGAGAAGGCCCCGTTCCGACTGCCCGACTTCATAGCCGCCACCGGCATTGCCGAAATGCGGGATGCTGTC
CTGGAAAAAGAAGCTGAGCAGACGCTCAAGCAGAAGCAGCGAGCCCGAGTCCAGCCGAAGATGGGAAGGCTTGAT
ATTGACTATCAGAAGCTCTACGATGCCTTCTTTCGGTTTCAGACCAAGCCAGAGCTGACCCGCTACGGTGAAGTA
TACTATGAGGGCAAAGAAGCCGAAGTTGACTACCAGCACTTCCGACCGGGAGAGTTGGGAGATGCGACCAAAGAG
GCGCTTGGCATGCCTCCTGGCGCTCCTCCGCCCTGGTTGATCAATCAGCAGCGTATCGGCCCTCCCCCTTCCTTC
CCGACCCTAAAAATTCCGGGTCTGAACGTCCCGCCCCCCGTCGGCGGCACATGGGGATATCACCCTGGCGGCTGG
GGGAAGCCTCCTGTCGACGAATTAAATCGTCCACTATATGGTGGCGATGTGTTCGGCTTGAACAACCAGCCGGTC
GCCCAACCCCAGCCTGGCCCGCCTGAGCTACCGGCGGCAGAACCCGTGGAGCGCAATCTCTGGGGCGAACTGCAG
CCACATGAGGAAGAAGAGTCGGAGGAAGAGGGAGAAGAGGAAGAGGATGGTAGCGAGGAAGGCTCCCAAGAAGCG
GTAGCCGAAATGGGGGGTACGGAAACGCCTGGAGGTTACGCCAGCACTCTGGCACACAACCAGGGTGTCCAAACA
TCCATATCCGGGGAGATGGATCTCCGAAAAGAGCGCCCTGGCTATGGCACAGAAACACCGTCTGGTCGTTCCGCC
TTCATGGTCCTCAGGGAGCAAAAGACTCAGGGTGGCGGAAGCGGTCTCTTCGGCGTCGGCCACCAATATGACTTG
AGCTCGACTCATCACCCGACGATGCCTGTCCTCGGCGCCGAGGACGAGGGCCGCAAGCGCAAAAGGCCAGGTGAC
GTGGATGTGGCCTTAGATGTCGATTCTCTGAACCAGAACGACGGCATCAGCAAGGACGCTGTTCGCCAGAAGTTC
GAGGAAGGTAGGCAGAAAGAGGGAATCGGGTCGAATTGGAAGCACGACCAGGAGCTAGCCGACATGATTGCTGCC
GAAAGCCGCAAACGCCAGAAGACGGAGCAGGATCGGATGGATCGTCGCAAGGAAGGACGGGGCAAACGCTGA
Gene >Hirsu2|2173
ATGGCGGCCCCTAAAATGACCAAAAACCAGATACGGCGGGCCAAGAGGAAGGAGCTGAAAAAAGCCCAGACAGAG
GTACGCTATGCGAAACCACTCGGAGCCACCTGTCTCTCGTTAAACCTGTTTGAATAACTCAATACCCAGAAGCAT
CAGCGGGAGGAATCTACTGGGGCTGCCGACTATCACCAGATAGCAGCGAGGTCCGAGGACGGAGAAGACGATGAA
AACGTTGTCAGGAAGCTTGCAGACACCGACCTAGCCATTACCGTGGAAACCCCGTCCCTCGATGACGAACTCGCA
GACGATCCCGCCTTTGCAACCTACAAAGACATTTTCACCAAGTTTGGCGCTCCTCTCGGAGAAGACGACGTTGCC
AGAGAGGCAAATGCGGGCAATCAAGGGAGCGTCTTTTTCGATGAAGACGACGACATACCTGACGAGGACGAGAAT
CAGCTGGGCAAGACCAAGCTCTCCAAAAAGAAGCGCAAACAGATGAAGACACTGTCTGTCGCAGAGCTCAAGGCC
ATGGTCAAGCACCCCGAGGTTATCGAGTGGCACGATGTCTCTTCGGCCGATCCCCGGACCCTCGTGCAGATCAAG
GCCCAGCGTAACGTCGTCCCTGTTCCCACGCATTGGTCGCTGAAAAGAGAGTATCTGTCGTCCAAACGCGGCATC
GAGAAGGCCCCGTTCCGACTGCCCGACTTCATAGCCGCCACCGGCATTGCCGAAATGCGGGATGCTGTCCTGGAA
AAAGAAGCTGAGCAGACGCTCAAGCAGAAGCAGCGAGCCCGAGTCCAGCCGAAGATGGGAAGGCTTGATATTGAC
TATCAGAAGCTCTACGATGCCTTCTTTCGGTTTCAGACCAAGCCAGAGCTGACCCGCTACGGTGAAGTATACTAT
GAGGGCAAAGAAGCCGAAGTTGACTACCAGCACTTCCGACCGGGAGAGTTGGGAGATGCGACCAAAGAGGCGCTT
GGCATGCCTCCTGGCGCTCCTCCGCCCTGGTTGATCAATCAGCAGCGTATCGGCCCTCCCCCTTCCTTCCCGACC
CTAAAAATTCCGGGTCTGAACGTCCCGCCCCCCGTCGGCGGCACATGGGGATATCACCCTGGCGGCTGGGGGAAG
CCTCCTGTCGACGAATTAAATCGTCCACTATATGGTGGCGATGTGTTCGGCTTGAACAACCAGCCGGTCGCCCAA
CCCCAGCCTGGCCCGCCTGAGCTACCGGCGGCAGAACCCGTGGAGCGCAATCTCTGGGGCGAACTGCAGCCACAT
GAGGAAGAAGAGTCGGAGGAAGAGGGAGAAGAGGAAGAGGATGGTAGCGAGGAAGGCTCCCAAGAAGCGGTAGCC
GAAATGGGGGGTACGGAAACGCCTGGAGGTTACGCCAGCACTCTGGCACACAACCAGGGTGTCCAAACATCCATA
TCCGGGGAGATGGATCTCCGAAAAGAGCGCCCTGGCTATGGCACAGAAACACCGTCTGGTCGTTCCGCCTTCATG
GTCCTCAGGGAGCAAAAGACTCAGGGTGGCGGAAGCGGTCTCTTCGGCGTCGGCCACCAATATGACTTGAGCTCG
ACTCATCACCCGACGATGCCTGTCCTCGGCGCCGAGGACGAGGGCCGCAAGCGCAAAAGGCCAGGTGACGTGGAT
GTGGCCTTAGATGTCGATTCTCTGAACCAGAACGACGGCATCAGCAAGGACGCTGTTCGCCAGAAGTTCGAGGAA
GGTAGGCAGAAAGAGGGAATCGGGTCGAATTGGAAGCACGACCAGGAGCTAGCCGACATGATTGCTGCCGAAAGC
CGCAAACGCCAGAAGACGGAGCAGGATCGGATGGATCGTCGCAAGGAAGGACGGGGCAAACGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail