© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2172 |
| Gene name | |
| Location | Contig_1501:964..3177 |
| Strand | + |
| Gene length (bp) | 2213 |
| Transcript length (bp) | 2046 |
| Coding sequence length (bp) | 2046 |
| Protein length (aa) | 682 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | Nuclear localization signal | 0.253 | 0.9293 | 0.0575 | 0.0103 | 0.0694 | 0.0059 | 0.038 | 0.016 | 0.0263 | 0.0112 |
| Orthofinder run ID | 4 |
| Orthogroup | 1978 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2172 MGNIISSPMHKAPHPAERDGPRPAKRRRLSSPDSFDIDRLIVSPPLFESGSTLRIEVLKILHKNSKKVKSYQGST FPRDVLTSKARCRVTIYDLSSGAPQILHCQSQLCNLVTFKNPVGPHRLARVDLSHPFYVPQESILINRPDDGRFD LSDSYQLLVELEAANEVSWPPLDSHDLGISVVPAYPPCGLTQHWILSSRFDGVVGRLKHCVSLSARFPADQPTFQ TDYVMDVDLRWAAGFKSLGHLDKDSKPCITAIDPDADHYGDADVEHPRDSEADGSHDRVNGESSHDPDDDFLNDQ TPSRSLRTREKAKVYNLKVLSDQAQGRDQKRRGRSIGATAVDGRIQYLLPSDQPVCLDFFRCVSCGAYHESMVQL QLHLQSIHPTYEYVLESTGQGPQFRVSTLREPIASPNKANQLGRQVKPFTLRTIATADQTWVTSRFVLESDEASR LSPSQSHAERLQSDSPILKGSRLGVSRRSRRPKASKALVPEISQPLFHPISRARLQPGQEVPETLPDETWLIQKH RESIGDFSDVTPAEKEYIWEWDGYILQKNLTSVAYFHREWLGFVKEKARWLASEERRMLEFGKHSSVLLARDVLD DKIIGDAFVFIDDARAELRRVGVDLSGGSSNRRAAEAALKQSPRTSQIRKSANGCTVCKLPVLGPTLLICSNALS TNLFEF* |
| Coding | >Hirsu2|2172 ATGGGCAACATCATATCTTCCCCGATGCACAAAGCCCCGCATCCCGCCGAACGCGATGGCCCCAGGCCTGCTAAG CGCCGCCGCCTCTCATCGCCCGACTCGTTCGACATTGACCGACTCATCGTGTCGCCTCCGTTGTTCGAGTCTGGT TCGACGCTGCGCATTGAGGTGCTCAAGATTCTCCATAAGAACTCCAAGAAGGTCAAGTCGTACCAAGGCTCCACA TTCCCTCGCGACGTCCTCACTAGCAAGGCCCGCTGCAGAGTCACTATTTACGACCTCAGCTCTGGCGCACCTCAG ATCCTGCACTGCCAGAGCCAGCTTTGTAATTTGGTCACTTTTAAAAACCCCGTGGGCCCTCATCGCCTGGCCCGC GTCGACCTGTCGCACCCCTTTTATGTTCCTCAAGAGAGCATTCTCATCAACAGGCCGGACGACGGCAGATTTGAT TTATCTGACTCGTACCAACTCCTCGTCGAACTGGAAGCCGCCAACGAAGTCTCCTGGCCTCCCCTCGACTCGCAC GACCTTGGAATCTCCGTCGTTCCGGCTTATCCGCCCTGTGGCTTGACGCAACATTGGATCTTGTCTAGTCGCTTC GACGGCGTCGTCGGCAGGCTGAAGCACTGCGTCAGCTTGTCGGCCAGGTTTCCTGCCGACCAGCCTACCTTCCAG ACAGACTATGTCATGGATGTTGATCTTCGATGGGCCGCCGGTTTTAAATCACTTGGTCACTTGGACAAGGATTCG AAGCCTTGCATCACTGCTATTGACCCCGACGCTGATCACTACGGAGATGCGGATGTCGAGCATCCACGGGACAGT GAAGCTGACGGCAGCCACGACCGCGTCAATGGAGAATCTTCTCATGATCCAGATGACGACTTTCTCAACGATCAG ACGCCCTCCCGGTCCCTGAGGACTCGTGAGAAAGCCAAGGTCTACAATTTGAAAGTTTTGAGCGACCAGGCCCAA GGTAGAGACCAAAAACGGCGTGGCAGAAGCATCGGCGCTACGGCCGTGGATGGACGGATCCAGTACCTCCTGCCG TCCGATCAACCTGTCTGCCTCGATTTTTTCCGCTGCGTCAGCTGCGGTGCCTATCACGAGTCCATGGTGCAGCTC CAGCTTCATCTTCAATCGATCCATCCTACGTATGAGTACGTGCTCGAGTCGACAGGTCAAGGGCCGCAGTTTCGT GTCTCTACTCTGCGCGAGCCGATTGCATCTCCGAACAAAGCCAACCAGCTTGGACGCCAGGTTAAGCCCTTCACT CTCCGCACCATCGCTACCGCCGACCAGACGTGGGTCACGTCGCGGTTCGTGCTGGAAAGTGACGAGGCCTCCCGG TTGTCGCCATCCCAATCTCACGCGGAGCGATTGCAATCAGATTCCCCGATCTTGAAAGGTTCGAGACTTGGCGTA TCGCGACGTTCGCGGCGACCGAAGGCAAGCAAGGCCCTGGTGCCGGAGATATCTCAGCCTCTGTTCCATCCCATT AGCAGAGCGCGACTGCAGCCTGGACAGGAGGTGCCGGAAACACTGCCAGATGAGACCTGGTTAATTCAGAAGCAC CGGGAGAGCATCGGCGATTTCTCCGATGTCACACCGGCCGAGAAAGAGTATATTTGGGAATGGGACGGCTACATT CTCCAGAAGAATCTCACCTCCGTTGCTTACTTTCACCGGGAATGGCTCGGGTTCGTCAAAGAAAAGGCTCGGTGG CTGGCCTCTGAGGAACGCCGCATGCTCGAATTCGGCAAACATTCAAGCGTGCTGCTTGCTCGCGATGTTTTAGAC GACAAGATCATAGGAGATGCTTTTGTCTTCATCGATGATGCCAGGGCCGAGCTGAGGAGGGTTGGTGTTGACCTA TCGGGCGGGTCTAGCAACAGGCGGGCGGCAGAAGCCGCATTGAAACAATCTCCGAGAACCTCGCAGATACGCAAG AGCGCCAACGGTTGTACTGTCTGCAAGCTCCCCGTTCTTGGACCGACACTGCTGATATGCTCCAATGCGTTGTCA ACGAACCTTTTCGAGTTTTGA |
| Transcript | >Hirsu2|2172 ATGGGCAACATCATATCTTCCCCGATGCACAAAGCCCCGCATCCCGCCGAACGCGATGGCCCCAGGCCTGCTAAG CGCCGCCGCCTCTCATCGCCCGACTCGTTCGACATTGACCGACTCATCGTGTCGCCTCCGTTGTTCGAGTCTGGT TCGACGCTGCGCATTGAGGTGCTCAAGATTCTCCATAAGAACTCCAAGAAGGTCAAGTCGTACCAAGGCTCCACA TTCCCTCGCGACGTCCTCACTAGCAAGGCCCGCTGCAGAGTCACTATTTACGACCTCAGCTCTGGCGCACCTCAG ATCCTGCACTGCCAGAGCCAGCTTTGTAATTTGGTCACTTTTAAAAACCCCGTGGGCCCTCATCGCCTGGCCCGC GTCGACCTGTCGCACCCCTTTTATGTTCCTCAAGAGAGCATTCTCATCAACAGGCCGGACGACGGCAGATTTGAT TTATCTGACTCGTACCAACTCCTCGTCGAACTGGAAGCCGCCAACGAAGTCTCCTGGCCTCCCCTCGACTCGCAC GACCTTGGAATCTCCGTCGTTCCGGCTTATCCGCCCTGTGGCTTGACGCAACATTGGATCTTGTCTAGTCGCTTC GACGGCGTCGTCGGCAGGCTGAAGCACTGCGTCAGCTTGTCGGCCAGGTTTCCTGCCGACCAGCCTACCTTCCAG ACAGACTATGTCATGGATGTTGATCTTCGATGGGCCGCCGGTTTTAAATCACTTGGTCACTTGGACAAGGATTCG AAGCCTTGCATCACTGCTATTGACCCCGACGCTGATCACTACGGAGATGCGGATGTCGAGCATCCACGGGACAGT GAAGCTGACGGCAGCCACGACCGCGTCAATGGAGAATCTTCTCATGATCCAGATGACGACTTTCTCAACGATCAG ACGCCCTCCCGGTCCCTGAGGACTCGTGAGAAAGCCAAGGTCTACAATTTGAAAGTTTTGAGCGACCAGGCCCAA GGTAGAGACCAAAAACGGCGTGGCAGAAGCATCGGCGCTACGGCCGTGGATGGACGGATCCAGTACCTCCTGCCG TCCGATCAACCTGTCTGCCTCGATTTTTTCCGCTGCGTCAGCTGCGGTGCCTATCACGAGTCCATGGTGCAGCTC CAGCTTCATCTTCAATCGATCCATCCTACGTATGAGTACGTGCTCGAGTCGACAGGTCAAGGGCCGCAGTTTCGT GTCTCTACTCTGCGCGAGCCGATTGCATCTCCGAACAAAGCCAACCAGCTTGGACGCCAGGTTAAGCCCTTCACT CTCCGCACCATCGCTACCGCCGACCAGACGTGGGTCACGTCGCGGTTCGTGCTGGAAAGTGACGAGGCCTCCCGG TTGTCGCCATCCCAATCTCACGCGGAGCGATTGCAATCAGATTCCCCGATCTTGAAAGGTTCGAGACTTGGCGTA TCGCGACGTTCGCGGCGACCGAAGGCAAGCAAGGCCCTGGTGCCGGAGATATCTCAGCCTCTGTTCCATCCCATT AGCAGAGCGCGACTGCAGCCTGGACAGGAGGTGCCGGAAACACTGCCAGATGAGACCTGGTTAATTCAGAAGCAC CGGGAGAGCATCGGCGATTTCTCCGATGTCACACCGGCCGAGAAAGAGTATATTTGGGAATGGGACGGCTACATT CTCCAGAAGAATCTCACCTCCGTTGCTTACTTTCACCGGGAATGGCTCGGGTTCGTCAAAGAAAAGGCTCGGTGG CTGGCCTCTGAGGAACGCCGCATGCTCGAATTCGGCAAACATTCAAGCGTGCTGCTTGCTCGCGATGTTTTAGAC GACAAGATCATAGGAGATGCTTTTGTCTTCATCGATGATGCCAGGGCCGAGCTGAGGAGGGTTGGTGTTGACCTA TCGGGCGGGTCTAGCAACAGGCGGGCGGCAGAAGCCGCATTGAAACAATCTCCGAGAACCTCGCAGATACGCAAG AGCGCCAACGGTTGTACTGTCTGCAAGCTCCCCGTTCTTGGACCGACACTGCTGATATGCTCCAATGCGTTGTCA ACGAACCTTTTCGAGTTTTGA |
| Gene | >Hirsu2|2172 ATGGGCAACATCATATCTTCCCCGATGCACAAAGCCCCGCATCCCGCCGAACGCGATGGCCCCAGGCCTGCTAAG CGCCGCCGCCTCTCATCGCCCGACTCGTTCGACATTGACCGACTCATCGTGTCGCCTCCGTTGTTCGAGTCTGGT TCGACGCTGCGCATTGAGGTGCTCAAGATTCTCCATAAGAACTCCAAGAAGGTCAAGTCGTACCAAGGCTCCACA TTCCCTCGCGACGTCCTCACTAGCAAGGCCCGCTGCAGAGTCACTATTTACGACCTCAGCTCTGGCGCACCTCAG ATCCTGCACTGCCAGAGCCAGCTTTGTAATTTGGTCACTTTTAAAAACCCCGTGGGCCCTCATCGCCTGGCCCGC GTCGACCTGTCGCACCCCTTTTATGTTCCTCAAGAGAGCATTCTCATCAACAGGCCGGACGACGGCAGATTTGAT TTATCTGACTCGTACCAACTCCTCGTCGAACTGGAAGCCGCCAACGAAGTCTCCTGGCCTCCCCTCGACTCGCAC GACCTTGGAATCTCCGTCGTTCCGGCTTATCCGCCCTGTGGCTTGACGCAACATTGGATCTTGTCTAGTCGCTTC GACGGCGTCGTCGGCAGGCTGAAGCACTGCGTCAGCTTGTCGGCCAGGTTTCCTGCCGACCAGCCTACCTTCCAG ACAGACTATGTCATGGATGTTGATCTTCGATGGGCCGCCGGTTTTAAATCACTTGGTCACTTGGACAAGGATTCG AAGCCTTGCATCACTGCTATTGACCCCGACGCTGATCACTACGGAGATGCGGATGTCGAGCATCCACGGGACAGT GAAGCTGACGGCAGCCACGACCGCGTCAATGGAGAATCTTCTCATGATCCAGATGACGACTTTCTCAACGATCAG ACGCCCTCCCGGTCCCTGAGGACTCGTGAGAAAGCCAAGGTCTACAATTTGAAAGTTTTGAGCGACCAGGCCCAA GGTAGAGACCAAAAACGGCGTGGCAGAAGCATCGGCGCTACGGCCGTGGATGGACGGATCCAGTACCTCCTGCCG TCCGATCAACCTGTCTGCCTCGATTTTTTCCGCTGCGTCAGCTGCGGTGCCTATCACGAGTCCATGGTGCAGCTC CAGCTTCATCTTCAATCGATCCATCCTACGTATGAGTACGTGCTCGAGTCGACAGGTCAAGGGCCGCAGTTTCGT GTCTCTACTCTGCGCGAGCCGATTGCATCTCCGAACAAAGCCAACCAGCTTGGACGCCAGGTTAAGCCCTTCACT CTCCGCACCATCGCTACCGCCGACCAGACGTGGGTCACGTCGCGGTTCGTGCTGGAAAGTGACGAGGCCTCCCGG TTGTCGCCATCCCAATCTCACGCGGAGCGATTGCAATCAGATTCCCCGATCTTGAAAGGTTCGAGACTTGGCGTA TCGCGACGTTCGCGGCGACCGAAGGCAAGCAAGGCCCTGGTGCCGGAGATATCTCAGCCTCTGTTCCATCCCATT AGCAGAGCGCGACTGCAGCCTGGACAGGAGGTGCCGGAAACACTGCCAGATGAGACCTGGTTAATTCAGAAGCAC CGGGAGAGCATCGGCGATTTCTCCGATGTCACACCGGCCGAGAAAGAGTATATTTGGGAATGGGACGGCTACATT CTCCAGAAGAATCTCACCTCCGTTGCTTACTTTCACCGGGAATGGCTCGGGTTCGTCAAAGAAAAGGCTCGGTGG CTGGCCTCTGAGGAACGCCGCATGCTCGAATTCGGCAAACATTCAAGCGTGCTGCTTGCTCGCGATGTTTTAGAC GACAAGATCATAGGAGATGCTTTTGTCTTCATCGATGATGCCAGGGCCGAGCTGAGGAGGGTTGGTGTTGACCTA TCGGGCGGGTCTAGCAACAGGCGGGCGGCAGAAGCCGCATTGAAACAATCTCCGAGAACCTCGCAGATACGCAAG AGCGCCAACGGTTGTACTGTCTGCAAGCTCCCCGTTCTTGGACCGACACTGCTGATATGCTCCAATGCGGTACGT GCTATCAATTTCTCGGTCGATGAAGGCCGGCGGCTAACCGCTCCGCACAAGTTGTGTTCGCGACGTCTGTACCAT TCTCCGTGTATCAAGAAAGAAGCCCTTATGCCAGTCATTCGGTCGAAGTGGCTCTGCAATGTCTGTTGTGGGGCT AACAGCGTGCATTAGCAACGAACCTTTTCGAGTTTTGA |