Protein ID | Hirsu2|2170 |
Gene name | |
Location | Contig_1500:1211..2854 |
Strand | + |
Gene length (bp) | 1643 |
Transcript length (bp) | 1473 |
Coding sequence length (bp) | 1473 |
Protein length (aa) | 491 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02636 | Methyltransf_28 | Putative S-adenosyl-L-methionine-dependent methyltransferase | 8.5E-40 | 177 | 447 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O14138|NDUF7_SCHPO | NADH dehydrogenase [ubiquinone] complex I, assembly factor 7 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC25A8.03c PE=3 SV=2 | 87 | 464 | 1.0E-27 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Mitochondrion | Mitochondrial transit peptide | 0.2186 | 0.2016 | 0.1516 | 0.0251 | 0.9027 | 0.0335 | 0.0475 | 0.0351 | 0.0477 | 0.0701 |
Orthofinder run ID | 4 |
Orthogroup | 1976 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2170 MDSPIVTQLFRQLFRHRPRGCQARRLRGDDGPRRGYATRASRDRGMRTNESRWQHRTDILAEDRLDEFAKYPSIS LEELKTRTQRPRRVKMLLRDFIDDSLYNPSYGYFSKQAVIFSPGTAFDFGSFRDELDFQRELARRYDEFEDGLDA AAGGPDAMRQLWHTPTELFGPYYGEAVARYLVSNYRLTTYPYDDLVIFEVGAGRGTLMLNILDHIRDTDPQVYAR TRYTIVEISPAMAAVQAARLRATAHADRVDIERRSIFDWDRRVPTPCFFLALEVFDNLAHDGIRYDVETEAPLQG HVLVDADGDFHEFYLHRLDPVAARFFRLRHAATAGAYPRPYPPSALLRRLAARLPLAANLSDPEYVPTRLMQFFD VLERHFPAHRLLAADFAALPDAVRGLNAPVVQTRYRRTMVPVSTPLVHQGFFDILFPTDFAVAEALYRAITGRLT RVLSHGDFMRRWADVDDTRTRSGESPLLTHYRNASVLLTV* |
Coding | >Hirsu2|2170 ATGGACTCGCCCATCGTGACGCAGCTCTTCCGGCAGCTGTTCCGCCATCGGCCGCGCGGGTGCCAGGCCCGGCGG CTGCGCGGCGACGACGGCCCTCGCCGGGGGTACGCGACGCGGGCCTCGCGCGACCGCGGCATGAGGACCAACGAG AGCCGCTGGCAGCACCGGACCGACATCCTGGCCGAGGACCGGCTGGACGAGTTCGCCAAGTACCCGAGCATCTCG CTGGAGGAGCTCAAGACGCGGACGCAGCGGCCGCGCAGGGTCAAGATGCTGCTGCGGGACTTTATCGACGACTCG CTGTACAACCCGTCGTACGGCTACTTCTCCAAGCAGGCCGTCATCTTCAGCCCCGGGACGGCGTTCGACTTCGGC AGCTTCCGCGACGAGCTCGACTTCCAGCGGGAGCTGGCGCGGCGGTACGACGAGTTCGAGGACGGGCTGGACGCG GCGGCGGGCGGGCCGGACGCGATGCGGCAGCTGTGGCACACGCCGACGGAGCTCTTCGGCCCCTACTACGGCGAG GCGGTGGCGCGGTACCTCGTGTCCAACTACCGGCTGACGACGTACCCGTACGACGACCTGGTCATCTTCGAGGTG GGCGCCGGGCGCGGGACGCTGATGCTCAACATCCTGGACCACATCCGCGACACGGACCCGCAGGTGTACGCGCGC ACGCGCTACACCATCGTCGAGATCTCGCCGGCCATGGCGGCGGTGCAGGCGGCGCGGCTGCGGGCGACGGCGCAC GCCGACCGCGTCGACATCGAGCGCCGCTCCATCTTCGACTGGGACCGGCGCGTGCCCACGCCGTGCTTCTTCCTC GCGCTCGAGGTCTTCGACAACCTGGCCCACGACGGCATCCGGTACGACGTCGAGACGGAGGCGCCGCTGCAGGGC CACGTCCTCGTCGACGCCGACGGCGACTTCCACGAGTTCTACCTGCACCGCCTCGACCCCGTCGCCGCCCGCTTC TTCCGCCTGCGCCACGCCGCCACCGCCGGCGCCTACCCCCGCCCCTACCCGCCCAGCGCCCTGCTGCGCCGCCTG GCCGCCCGCCTGCCGCTGGCCGCCAACCTGTCGGACCCGGAGTACGTGCCGACGCGCCTGATGCAGTTCTTCGAC GTCCTCGAGCGCCACTTCCCCGCCCACCGCCTGCTGGCCGCCGACTTCGCCGCCCTGCCCGACGCCGTCCGCGGC CTCAACGCGCCCGTCGTCCAGACGCGCTACCGCCGCACCATGGTGCCCGTCTCCACGCCCCTCGTCCACCAGGGC TTCTTCGACATCCTCTTCCCCACCGACTTCGCCGTCGCCGAGGCCCTCTACCGCGCCATCACCGGCCGCCTGACC CGCGTCCTCTCCCACGGCGACTTCATGCGCCGCTGGGCCGACGTCGACGACACGCGCACCCGCTCCGGCGAGAGC CCGCTGCTGACGCACTACCGCAACGCCAGCGTCCTGCTCACCGTCTGA |
Transcript | >Hirsu2|2170 ATGGACTCGCCCATCGTGACGCAGCTCTTCCGGCAGCTGTTCCGCCATCGGCCGCGCGGGTGCCAGGCCCGGCGG CTGCGCGGCGACGACGGCCCTCGCCGGGGGTACGCGACGCGGGCCTCGCGCGACCGCGGCATGAGGACCAACGAG AGCCGCTGGCAGCACCGGACCGACATCCTGGCCGAGGACCGGCTGGACGAGTTCGCCAAGTACCCGAGCATCTCG CTGGAGGAGCTCAAGACGCGGACGCAGCGGCCGCGCAGGGTCAAGATGCTGCTGCGGGACTTTATCGACGACTCG CTGTACAACCCGTCGTACGGCTACTTCTCCAAGCAGGCCGTCATCTTCAGCCCCGGGACGGCGTTCGACTTCGGC AGCTTCCGCGACGAGCTCGACTTCCAGCGGGAGCTGGCGCGGCGGTACGACGAGTTCGAGGACGGGCTGGACGCG GCGGCGGGCGGGCCGGACGCGATGCGGCAGCTGTGGCACACGCCGACGGAGCTCTTCGGCCCCTACTACGGCGAG GCGGTGGCGCGGTACCTCGTGTCCAACTACCGGCTGACGACGTACCCGTACGACGACCTGGTCATCTTCGAGGTG GGCGCCGGGCGCGGGACGCTGATGCTCAACATCCTGGACCACATCCGCGACACGGACCCGCAGGTGTACGCGCGC ACGCGCTACACCATCGTCGAGATCTCGCCGGCCATGGCGGCGGTGCAGGCGGCGCGGCTGCGGGCGACGGCGCAC GCCGACCGCGTCGACATCGAGCGCCGCTCCATCTTCGACTGGGACCGGCGCGTGCCCACGCCGTGCTTCTTCCTC GCGCTCGAGGTCTTCGACAACCTGGCCCACGACGGCATCCGGTACGACGTCGAGACGGAGGCGCCGCTGCAGGGC CACGTCCTCGTCGACGCCGACGGCGACTTCCACGAGTTCTACCTGCACCGCCTCGACCCCGTCGCCGCCCGCTTC TTCCGCCTGCGCCACGCCGCCACCGCCGGCGCCTACCCCCGCCCCTACCCGCCCAGCGCCCTGCTGCGCCGCCTG GCCGCCCGCCTGCCGCTGGCCGCCAACCTGTCGGACCCGGAGTACGTGCCGACGCGCCTGATGCAGTTCTTCGAC GTCCTCGAGCGCCACTTCCCCGCCCACCGCCTGCTGGCCGCCGACTTCGCCGCCCTGCCCGACGCCGTCCGCGGC CTCAACGCGCCCGTCGTCCAGACGCGCTACCGCCGCACCATGGTGCCCGTCTCCACGCCCCTCGTCCACCAGGGC TTCTTCGACATCCTCTTCCCCACCGACTTCGCCGTCGCCGAGGCCCTCTACCGCGCCATCACCGGCCGCCTGACC CGCGTCCTCTCCCACGGCGACTTCATGCGCCGCTGGGCCGACGTCGACGACACGCGCACCCGCTCCGGCGAGAGC CCGCTGCTGACGCACTACCGCAACGCCAGCGTCCTGCTCACCGTCTGA |
Gene | >Hirsu2|2170 ATGGACTCGCCCATCGTGACGCAGCTCTTCCGGCAGCTGTTCCGCCATCGGCCGCGCGGGTGCCAGGCCCGGCGG CTGCGCGGCGACGACGGCCCTCGCCGGGGGTACGCGACGCGGGCCTCGCGCGACCGCGGCATGAGGACCAACGAG AGCCGCTGGCAGCACCGGACCGACATCCTGGCCGAGGACCGGCTGGACGAGTTCGCCAAGTACCCGAGCATCTCG CTGGAGGAGCTCAAGACGCGGACGCAGCGGCCGCGCAGGGTCAAGATGCTGCTGCGGGACTTTATCGACGGTTCT GTTCCCGTTCCCCGAGAGCACCGGCAAAAATAAAAAAAAAAAAAAATAGGAATGCGGGCTGACGGAGGAGAGGGC GCGCAGACTCGCTGTACAACCCGTCGTACGGCTACTTCTCCAAGCAGGCCGTCATCTTCAGCCCCGGGACGGCGT TCGACTTCGGCAGCTTCCGCGACGAGCTCGACTTCCAGCGGGAGCTGGCGCGGCGGTACGACGAGTTCGAGGACG GGCTGGACGCGGCGGCGGGCGGGCCGGACGCGATGCGGCAGCTGTGGCACACGCCGACGGAGCTCTTCGGCCCCT ACTACGGCGAGGCGGTGGCGCGGTACCTCGTGTCCAACTACCGGCTGACGACGTACCCGTACGACGACCTGGTCA TCTTCGAGGTGGGCGCCGGGCGCGGGACGCTGATGCTCAACATCCTGGACCACATCCGCGACACGGACCCGCAGG TGTACGCGCGCACGCGCTACACCATCGTCGAGATCTCGCCGGCCATGGCGGCGGTGCAGGCGGCGCGGCTGCGGG CGACGGCGCACGCCGACCGCGTCGACATCGAGCGCCGCTCCATCTTCGACTGGGACCGGCGCGTGCCCACGCCGT GCTTCTTCCTCGCGCTCGAGGTCTTCGACAACCTGGCCCACGACGGCATCCGGTACGACGTCGAGACGGAGGCGC CGCTGCAGGGCCACGTCCTCGTCGACGCCGACGGCGACTTCCACGAGTTCTACCTGCACCGCCTCGACCCCGTCG CCGCCCGCTTCTTCCGCCTGCGCCACGCCGCCACCGCCGGCGCCTACCCCCGCCCCTACCCGCCCAGCGCCCTGC TGCGCCGCCTGGCCGCCCGCCTGCCGCTGGCCGCCAACCTGTCGGACCCGGAGTACGTGCCGACGCGCCTGATGC AGTTCTTCGACGTCCTCGAGCGCCACTTCCCCGCCCACCGCCTGCTGGCCGCCGACTTCGCCGCCCTGCCCGACG CCGTCCGCGGCCTCAACGCGCCCGTCGTCCAGACGCGCTACCGCCGCACCATGGTGCCCGTCTCCACGCCCCTCG TCCGCTTCCCCCCTCCTCTCTTCCCCCTCATTCCCCCTCGAACCGTTGCTGACGACCGAGGCCGAGCGGCGGAGA ACAAACAGGTCCACCAGGGCTTCTTCGACATCCTCTTCCCCACCGACTTCGCCGTCGCCGAGGCCCTCTACCGCG CCATCACCGGCCGCCTGACCCGCGTCCTCTCCCACGGCGACTTCATGCGCCGCTGGGCCGACGTCGACGACACGC GCACCCGCTCCGGCGAGAGCCCGCTGCTGACGCACTACCGCAACGCCAGCGTCCTGCTCACCGTCTGA |