Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|217
Gene name
LocationContig_1039:1432..1924
Strand-
Gene length (bp)492
Transcript length (bp)492
Coding sequence length (bp)492
Protein length (aa) 164

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.3165 0.954 0.0344 0.0537 0.1044 0.0167 0.0335 0.0114 0.0168 0.0034

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1975
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5611
Ophiocordyceps australis map64 (Brazil) OphauB2|3256
Ophiocordyceps camponoti-floridani Ophcf2|06662
Ophiocordyceps camponoti-rufipedis Ophun1|6034
Ophiocordyceps kimflemingae Ophio5|6204
Ophiocordyceps subramaniannii Hirsu2|217 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|217
MPPQSPRRQSLRLREKAAKKVEYDSPLTQEITTNKYTKSHIELLAEDASPSSPCSALQTDKAPGAARAATDGASC
RATGPPRSEVVVPPAGPDGARKRRRTEKRRRWVWTIGQDDEDEGEVGTVAGFEGGAPRTHRARAADAEALPPPGE
ASTRSFVPSPSSR*
Coding >Hirsu2|217
ATGCCTCCCCAATCGCCCAGAAGGCAGTCTCTGCGGCTGCGGGAGAAGGCGGCGAAGAAGGTTGAATACGACAGC
CCGCTCACCCAGGAAATCACCACCAACAAGTACACGAAATCCCACATCGAGCTCCTCGCCGAAGACGCGTCGCCT
AGCTCGCCATGCTCCGCCTTGCAGACCGACAAAGCCCCGGGCGCCGCCCGCGCGGCCACCGACGGCGCGTCATGC
CGAGCGACGGGACCGCCGAGGTCCGAAGTCGTCGTCCCGCCAGCAGGGCCCGACGGTGCGCGCAAGCGAAGGAGG
ACGGAGAAGCGGCGGCGATGGGTCTGGACGATCGGCCAGGACGACGAGGACGAGGGCGAGGTCGGTACCGTGGCC
GGATTTGAGGGGGGGGCGCCCAGGACACACCGGGCACGCGCGGCCGACGCCGAAGCCTTGCCGCCGCCCGGCGAG
GCGAGCACGCGTTCCTTCGTCCCAAGCCCGTCTTCTCGGTAG
Transcript >Hirsu2|217
ATGCCTCCCCAATCGCCCAGAAGGCAGTCTCTGCGGCTGCGGGAGAAGGCGGCGAAGAAGGTTGAATACGACAGC
CCGCTCACCCAGGAAATCACCACCAACAAGTACACGAAATCCCACATCGAGCTCCTCGCCGAAGACGCGTCGCCT
AGCTCGCCATGCTCCGCCTTGCAGACCGACAAAGCCCCGGGCGCCGCCCGCGCGGCCACCGACGGCGCGTCATGC
CGAGCGACGGGACCGCCGAGGTCCGAAGTCGTCGTCCCGCCAGCAGGGCCCGACGGTGCGCGCAAGCGAAGGAGG
ACGGAGAAGCGGCGGCGATGGGTCTGGACGATCGGCCAGGACGACGAGGACGAGGGCGAGGTCGGTACCGTGGCC
GGATTTGAGGGGGGGGCGCCCAGGACACACCGGGCACGCGCGGCCGACGCCGAAGCCTTGCCGCCGCCCGGCGAG
GCGAGCACGCGTTCCTTCGTCCCAAGCCCGTCTTCTCGGTAG
Gene >Hirsu2|217
ATGCCTCCCCAATCGCCCAGAAGGCAGTCTCTGCGGCTGCGGGAGAAGGCGGCGAAGAAGGTTGAATACGACAGC
CCGCTCACCCAGGAAATCACCACCAACAAGTACACGAAATCCCACATCGAGCTCCTCGCCGAAGACGCGTCGCCT
AGCTCGCCATGCTCCGCCTTGCAGACCGACAAAGCCCCGGGCGCCGCCCGCGCGGCCACCGACGGCGCGTCATGC
CGAGCGACGGGACCGCCGAGGTCCGAAGTCGTCGTCCCGCCAGCAGGGCCCGACGGTGCGCGCAAGCGAAGGAGG
ACGGAGAAGCGGCGGCGATGGGTCTGGACGATCGGCCAGGACGACGAGGACGAGGGCGAGGTCGGTACCGTGGCC
GGATTTGAGGGGGGGGCGCCCAGGACACACCGGGCACGCGCGGCCGACGCCGAAGCCTTGCCGCCGCCCGGCGAG
GCGAGCACGCGTTCCTTCGTCCCAAGCCCGTCTTCTCGGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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