© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2167 |
| Gene name | |
| Location | Contig_150:30902..32486 |
| Strand | - |
| Gene length (bp) | 1584 |
| Transcript length (bp) | 1584 |
| Coding sequence length (bp) | 1584 |
| Protein length (aa) | 528 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01565 | FAD_binding_4 | FAD binding domain | 2.9E-12 | 10 | 136 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q15392|DHC24_HUMAN | Delta(24)-sterol reductase OS=Homo sapiens GN=DHCR24 PE=1 SV=2 | 51 | 475 | 7.0E-44 |
| sp|Q60HC5|DHC24_MACFA | Delta(24)-sterol reductase OS=Macaca fascicularis GN=DHCR24 PE=2 SV=2 | 51 | 475 | 7.0E-44 |
| sp|Q8VCH6|DHC24_MOUSE | Delta(24)-sterol reductase OS=Mus musculus GN=Dhcr24 PE=1 SV=1 | 51 | 435 | 2.0E-42 |
| sp|Q5BQE6|DHC24_RAT | Delta(24)-sterol reductase OS=Rattus norvegicus GN=Dhcr24 PE=2 SV=2 | 51 | 435 | 2.0E-42 |
| sp|Q39085|DIM_ARATH | Delta(24)-sterol reductase OS=Arabidopsis thaliana GN=DIM PE=1 SV=2 | 46 | 495 | 8.0E-36 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q15392|DHC24_HUMAN | Delta(24)-sterol reductase OS=Homo sapiens GN=DHCR24 PE=1 SV=2 | 51 | 475 | 7.0E-44 |
| sp|Q60HC5|DHC24_MACFA | Delta(24)-sterol reductase OS=Macaca fascicularis GN=DHCR24 PE=2 SV=2 | 51 | 475 | 7.0E-44 |
| sp|Q8VCH6|DHC24_MOUSE | Delta(24)-sterol reductase OS=Mus musculus GN=Dhcr24 PE=1 SV=1 | 51 | 435 | 2.0E-42 |
| sp|Q5BQE6|DHC24_RAT | Delta(24)-sterol reductase OS=Rattus norvegicus GN=Dhcr24 PE=2 SV=2 | 51 | 435 | 2.0E-42 |
| sp|Q39085|DIM_ARATH | Delta(24)-sterol reductase OS=Arabidopsis thaliana GN=DIM PE=1 SV=2 | 46 | 495 | 8.0E-36 |
| sp|O17397|DIML_CAEEL | Diminuto-like protein OS=Caenorhabditis elegans GN=F52H2.6 PE=3 SV=1 | 37 | 435 | 4.0E-34 |
| sp|P93472|DIM_PEA | Delta(24)-sterol reductase OS=Pisum sativum GN=DIM PE=1 SV=1 | 46 | 498 | 9.0E-33 |
| sp|Q5JLP4|CKX4_ORYSJ | Cytokinin dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CKX4 PE=2 SV=1 | 75 | 223 | 3.0E-11 |
| sp|Q9LY71|CKX6_ARATH | Cytokinin dehydrogenase 6 OS=Arabidopsis thaliana GN=CKX6 PE=2 SV=2 | 75 | 232 | 2.0E-09 |
| sp|Q75K78|CKX9_ORYSJ | Cytokinin dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CKX9 PE=2 SV=1 | 4 | 212 | 2.0E-09 |
| sp|Q9FUJ1|CKX7_ARATH | Cytokinin dehydrogenase 7 OS=Arabidopsis thaliana GN=CKX7 PE=1 SV=1 | 73 | 224 | 4.0E-09 |
| sp|O22213|CKX1_ARATH | Cytokinin dehydrogenase 1 OS=Arabidopsis thaliana GN=CKX1 PE=1 SV=1 | 75 | 257 | 1.0E-08 |
| sp|Q5Z620|CKX10_ORYSJ | Cytokinin dehydrogenase 10 OS=Oryza sativa subsp. japonica GN=CKX10 PE=3 SV=1 | 11 | 175 | 2.0E-08 |
| sp|Q67YU0|CKX5_ARATH | Cytokinin dehydrogenase 5 OS=Arabidopsis thaliana GN=CKX5 PE=2 SV=1 | 29 | 285 | 3.0E-08 |
| sp|Q7SGY1|ALO_NEUCR | Putative D-arabinono-1,4-lactone oxidase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=alo-1 PE=3 SV=1 | 45 | 167 | 1.0E-07 |
| sp|Q6YW50|CKX7_ORYSJ | Cytokinin dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CKX7 PE=3 SV=1 | 41 | 202 | 2.0E-07 |
| sp|Q9LTS3|CKX3_ARATH | Cytokinin dehydrogenase 3 OS=Arabidopsis thaliana GN=CKX3 PE=1 SV=1 | 7 | 210 | 4.0E-07 |
| sp|Q8LNV6|CKX3_ORYSJ | Cytokinin dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CKX3 PE=2 SV=1 | 75 | 175 | 4.0E-07 |
| sp|Q9FUJ3|CKX2_ARATH | Cytokinin dehydrogenase 2 OS=Arabidopsis thaliana GN=CKX2 PE=1 SV=2 | 42 | 205 | 8.0E-07 |
| sp|A3AVP1|CKX8_ORYSJ | Cytokinin dehydrogenase 8 OS=Oryza sativa subsp. japonica GN=CKX8 PE=3 SV=1 | 75 | 175 | 9.0E-07 |
| sp|A2XVN3|CKX8_ORYSI | Cytokinin dehydrogenase 8 OS=Oryza sativa subsp. indica GN=CKX8 PE=3 SV=1 | 75 | 175 | 9.0E-07 |
| sp|Q6Z955|CKX11_ORYSJ | Cytokinin dehydrogenase 11 OS=Oryza sativa subsp. japonica GN=CKX11 PE=2 SV=1 | 69 | 207 | 2.0E-06 |
| sp|Q6YW51|CKX6_ORYSJ | Cytokinin dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CKX6 PE=3 SV=1 | 41 | 202 | 2.0E-06 |
| sp|P94535|GLCD_BACSU | Glycolate oxidase subunit GlcD OS=Bacillus subtilis (strain 168) GN=glcD PE=3 SV=1 | 39 | 201 | 4.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:0036094 | small molecule binding | No |
| GO:0043168 | anion binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0005488 | binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0043167 | ion binding | No |
| GO:0003674 | molecular_function | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Endoplasmic reticulum | 0.4348 | 0.1434 | 0.0561 | 0.2924 | 0.4265 | 0.159 | 0.4988 | 0.2305 | 0.3602 | 0.1171 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 143 | 165 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 1974 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2167 MERHKEAVGKIAAAVRGFFERKESYRIFHGSTNSTRPRPRPGARVVDISALSNAIAVDRAARTALVEPNVPMDRL VETTLREGLVPPVVMEFPGITAGGGYAGTAGESSSFRHGFFNDTVNYIEMVLGNGEVVRASRNDRADLFLGAAGA VGTLGITTLLELRLVEAKKWIKTTYHRTGSVAEAVAKVRAETRDPTIDYVDGILFSKDHGAVITGRMTDDKPDHC VPQTFSGAWDPWYYLHVQEQTATAAEATDYIPLNEYLFRYDRAGFWVGAQGWTYFKYVPFNRFFRWFLDDFMHTR MLYRALHASGESARFVVQDLALPYDKAEQFVDYTADSFDIWPLWLCPLKQTLPPTFHPYTGETEETTAGPDGSDK PLVVPKDVLNIGLWGWGPPDHDVFIAKNRALEDKLVQLGGRKWLYAHTYYSEEDFWRVYNDHGAIGQVKAGPGAN STRAWYEALRTKYHATTLPTVYEKVRIDVDAAREERAKWRMSLKSRWPIGGLYGIWKSIQSGDYAHHRNAAWKYK KD* |
| Coding | >Hirsu2|2167 ATGGAGCGCCACAAGGAGGCCGTCGGCAAAATCGCCGCGGCCGTTCGCGGCTTCTTTGAGCGCAAGGAGTCATAC CGCATCTTCCACGGTAGCACCAACAGCACCCGTCCGCGGCCGCGGCCCGGCGCGCGCGTCGTCGACATCAGCGCC CTTTCTAACGCCATCGCCGTCGACCGCGCCGCCCGCACCGCCCTCGTCGAGCCCAACGTTCCTATGGACCGCCTA GTCGAGACGACACTGCGCGAGGGCCTCGTGCCGCCCGTCGTTATGGAGTTCCCCGGCATTACAGCCGGCGGCGGC TATGCGGGCACGGCTGGCGAGAGCTCGTCGTTCCGCCACGGCTTCTTTAACGATACGGTCAACTACATTGAGATG GTCCTAGGCAACGGCGAGGTCGTCCGCGCCTCGCGTAATGACCGCGCCGACCTATTTCTCGGCGCCGCCGGCGCC GTCGGGACACTTGGCATCACGACGCTGCTCGAGCTGCGCCTAGTCGAGGCCAAGAAGTGGATAAAGACGACGTAC CACCGCACCGGCAGCGTGGCCGAGGCCGTGGCCAAGGTGCGCGCCGAGACGCGGGATCCGACCATCGACTACGTC GATGGCATTCTCTTCTCCAAGGACCACGGTGCCGTCATCACCGGCCGCATGACCGACGACAAGCCCGACCATTGC GTGCCCCAGACCTTCAGCGGAGCTTGGGATCCCTGGTACTATCTGCATGTCCAGGAGCAGACGGCGACGGCGGCC GAGGCGACAGACTACATCCCGCTTAACGAGTACCTCTTTCGGTACGACCGCGCCGGCTTCTGGGTTGGTGCCCAG GGCTGGACCTACTTCAAGTACGTTCCCTTTAACCGCTTCTTTCGCTGGTTCCTCGACGACTTCATGCACACGCGC ATGCTCTACCGTGCGCTGCACGCCAGCGGCGAGTCTGCCCGCTTCGTCGTCCAGGACCTGGCCTTGCCGTACGAC AAGGCCGAGCAGTTCGTCGACTACACAGCCGACAGTTTCGACATCTGGCCCCTCTGGCTGTGCCCCCTCAAACAG ACGCTGCCCCCGACCTTTCACCCGTACACGGGCGAGACGGAGGAGACGACAGCCGGCCCCGACGGCTCGGACAAG CCGTTGGTCGTGCCCAAGGATGTTCTCAACATCGGCCTCTGGGGATGGGGCCCACCGGACCACGACGTCTTCATC GCCAAGAACCGCGCGCTCGAGGACAAGCTCGTCCAGCTGGGCGGTCGAAAGTGGCTGTACGCCCATACGTACTAC TCCGAGGAAGACTTCTGGCGCGTCTACAACGACCACGGCGCCATCGGCCAGGTCAAAGCCGGGCCCGGCGCCAAT AGCACCCGTGCTTGGTACGAGGCGCTGCGGACCAAGTACCACGCCACGACGCTGCCGACCGTCTACGAAAAGGTG CGCATCGACGTCGACGCCGCCCGCGAGGAGCGCGCCAAGTGGCGCATGTCCCTCAAGAGCAGATGGCCCATCGGC GGGCTCTACGGCATCTGGAAGAGCATACAGAGCGGCGACTACGCCCACCACCGCAACGCCGCGTGGAAGTACAAG AAGGATTAG |
| Transcript | >Hirsu2|2167 ATGGAGCGCCACAAGGAGGCCGTCGGCAAAATCGCCGCGGCCGTTCGCGGCTTCTTTGAGCGCAAGGAGTCATAC CGCATCTTCCACGGTAGCACCAACAGCACCCGTCCGCGGCCGCGGCCCGGCGCGCGCGTCGTCGACATCAGCGCC CTTTCTAACGCCATCGCCGTCGACCGCGCCGCCCGCACCGCCCTCGTCGAGCCCAACGTTCCTATGGACCGCCTA GTCGAGACGACACTGCGCGAGGGCCTCGTGCCGCCCGTCGTTATGGAGTTCCCCGGCATTACAGCCGGCGGCGGC TATGCGGGCACGGCTGGCGAGAGCTCGTCGTTCCGCCACGGCTTCTTTAACGATACGGTCAACTACATTGAGATG GTCCTAGGCAACGGCGAGGTCGTCCGCGCCTCGCGTAATGACCGCGCCGACCTATTTCTCGGCGCCGCCGGCGCC GTCGGGACACTTGGCATCACGACGCTGCTCGAGCTGCGCCTAGTCGAGGCCAAGAAGTGGATAAAGACGACGTAC CACCGCACCGGCAGCGTGGCCGAGGCCGTGGCCAAGGTGCGCGCCGAGACGCGGGATCCGACCATCGACTACGTC GATGGCATTCTCTTCTCCAAGGACCACGGTGCCGTCATCACCGGCCGCATGACCGACGACAAGCCCGACCATTGC GTGCCCCAGACCTTCAGCGGAGCTTGGGATCCCTGGTACTATCTGCATGTCCAGGAGCAGACGGCGACGGCGGCC GAGGCGACAGACTACATCCCGCTTAACGAGTACCTCTTTCGGTACGACCGCGCCGGCTTCTGGGTTGGTGCCCAG GGCTGGACCTACTTCAAGTACGTTCCCTTTAACCGCTTCTTTCGCTGGTTCCTCGACGACTTCATGCACACGCGC ATGCTCTACCGTGCGCTGCACGCCAGCGGCGAGTCTGCCCGCTTCGTCGTCCAGGACCTGGCCTTGCCGTACGAC AAGGCCGAGCAGTTCGTCGACTACACAGCCGACAGTTTCGACATCTGGCCCCTCTGGCTGTGCCCCCTCAAACAG ACGCTGCCCCCGACCTTTCACCCGTACACGGGCGAGACGGAGGAGACGACAGCCGGCCCCGACGGCTCGGACAAG CCGTTGGTCGTGCCCAAGGATGTTCTCAACATCGGCCTCTGGGGATGGGGCCCACCGGACCACGACGTCTTCATC GCCAAGAACCGCGCGCTCGAGGACAAGCTCGTCCAGCTGGGCGGTCGAAAGTGGCTGTACGCCCATACGTACTAC TCCGAGGAAGACTTCTGGCGCGTCTACAACGACCACGGCGCCATCGGCCAGGTCAAAGCCGGGCCCGGCGCCAAT AGCACCCGTGCTTGGTACGAGGCGCTGCGGACCAAGTACCACGCCACGACGCTGCCGACCGTCTACGAAAAGGTG CGCATCGACGTCGACGCCGCCCGCGAGGAGCGCGCCAAGTGGCGCATGTCCCTCAAGAGCAGATGGCCCATCGGC GGGCTCTACGGCATCTGGAAGAGCATACAGAGCGGCGACTACGCCCACCACCGCAACGCCGCGTGGAAGTACAAG AAGGATTAG |
| Gene | >Hirsu2|2167 ATGGAGCGCCACAAGGAGGCCGTCGGCAAAATCGCCGCGGCCGTTCGCGGCTTCTTTGAGCGCAAGGAGTCATAC CGCATCTTCCACGGTAGCACCAACAGCACCCGTCCGCGGCCGCGGCCCGGCGCGCGCGTCGTCGACATCAGCGCC CTTTCTAACGCCATCGCCGTCGACCGCGCCGCCCGCACCGCCCTCGTCGAGCCCAACGTTCCTATGGACCGCCTA GTCGAGACGACACTGCGCGAGGGCCTCGTGCCGCCCGTCGTTATGGAGTTCCCCGGCATTACAGCCGGCGGCGGC TATGCGGGCACGGCTGGCGAGAGCTCGTCGTTCCGCCACGGCTTCTTTAACGATACGGTCAACTACATTGAGATG GTCCTAGGCAACGGCGAGGTCGTCCGCGCCTCGCGTAATGACCGCGCCGACCTATTTCTCGGCGCCGCCGGCGCC GTCGGGACACTTGGCATCACGACGCTGCTCGAGCTGCGCCTAGTCGAGGCCAAGAAGTGGATAAAGACGACGTAC CACCGCACCGGCAGCGTGGCCGAGGCCGTGGCCAAGGTGCGCGCCGAGACGCGGGATCCGACCATCGACTACGTC GATGGCATTCTCTTCTCCAAGGACCACGGTGCCGTCATCACCGGCCGCATGACCGACGACAAGCCCGACCATTGC GTGCCCCAGACCTTCAGCGGAGCTTGGGATCCCTGGTACTATCTGCATGTCCAGGAGCAGACGGCGACGGCGGCC GAGGCGACAGACTACATCCCGCTTAACGAGTACCTCTTTCGGTACGACCGCGCCGGCTTCTGGGTTGGTGCCCAG GGCTGGACCTACTTCAAGTACGTTCCCTTTAACCGCTTCTTTCGCTGGTTCCTCGACGACTTCATGCACACGCGC ATGCTCTACCGTGCGCTGCACGCCAGCGGCGAGTCTGCCCGCTTCGTCGTCCAGGACCTGGCCTTGCCGTACGAC AAGGCCGAGCAGTTCGTCGACTACACAGCCGACAGTTTCGACATCTGGCCCCTCTGGCTGTGCCCCCTCAAACAG ACGCTGCCCCCGACCTTTCACCCGTACACGGGCGAGACGGAGGAGACGACAGCCGGCCCCGACGGCTCGGACAAG CCGTTGGTCGTGCCCAAGGATGTTCTCAACATCGGCCTCTGGGGATGGGGCCCACCGGACCACGACGTCTTCATC GCCAAGAACCGCGCGCTCGAGGACAAGCTCGTCCAGCTGGGCGGTCGAAAGTGGCTGTACGCCCATACGTACTAC TCCGAGGAAGACTTCTGGCGCGTCTACAACGACCACGGCGCCATCGGCCAGGTCAAAGCCGGGCCCGGCGCCAAT AGCACCCGTGCTTGGTACGAGGCGCTGCGGACCAAGTACCACGCCACGACGCTGCCGACCGTCTACGAAAAGGTG CGCATCGACGTCGACGCCGCCCGCGAGGAGCGCGCCAAGTGGCGCATGTCCCTCAAGAGCAGATGGCCCATCGGC GGGCTCTACGGCATCTGGAAGAGCATACAGAGCGGCGACTACGCCCACCACCGCAACGCCGCGTGGAAGTACAAG AAGGATTAG |