© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2161 |
| Gene name | |
| Location | Contig_150:12166..13129 |
| Strand | - |
| Gene length (bp) | 963 |
| Transcript length (bp) | 906 |
| Coding sequence length (bp) | 906 |
| Protein length (aa) | 302 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01822 | WSC | WSC domain | 1.9E-10 | 61 | 133 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P87179|WSC1_SCHPO | Cell wall integrity and stress response component 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=wsc1 PE=1 SV=3 | 207 | 300 | 5.0E-09 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 21 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 207 | 229 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2161 MRCSTIACAALLAAAQACGAADSPTHLVVDKRATLVQRQENDPPKQSPSTFPRPNAPTSHGCYKSAGNMTTHNVE NMSSGSCNEKCKSGKFSVSGLQGPNCFCGFAYPPDNAVVDDKKCGYPCPSYPLEACGGLGQPGFWSVFNTGVNVN PPTYDEASSTSSSASQPTSPPKSDDPDRPAPTAVQSPDSPPPSSPPPDNKGGAKTGGIVAGCVAAAVVALLIGAA IFFFVRRKRNAEIEEEHRRNAAVNAFINGSKPPGSSGSISMTDARLDPVLANRRMSDGSIADNEDYSRRILRVTN A* |
| Coding | >Hirsu2|2161 ATGCGGTGCTCGACAATCGCCTGCGCCGCCCTGCTGGCGGCGGCACAAGCCTGCGGCGCCGCCGACTCGCCTACT CACCTCGTCGTCGACAAGCGTGCCACTCTCGTCCAGCGCCAAGAAAACGACCCCCCGAAACAGAGCCCTTCGACG TTTCCTCGGCCGAACGCGCCCACGTCCCATGGCTGCTACAAGTCGGCTGGCAACATGACGACGCACAATGTCGAG AACATGTCGTCCGGCTCCTGCAACGAAAAGTGCAAGTCGGGCAAATTCTCCGTCTCGGGCCTCCAGGGCCCCAAC TGCTTCTGTGGCTTTGCCTATCCGCCAGACAACGCCGTCGTCGACGACAAGAAATGCGGCTACCCATGTCCCTCG TACCCCCTCGAAGCCTGCGGCGGACTCGGCCAGCCTGGCTTCTGGTCCGTCTTCAACACGGGCGTCAACGTCAAT CCGCCGACCTACGACGAAGCCTCTTCCACCTCGTCGAGCGCGTCCCAGCCCACGAGTCCGCCCAAGTCGGACGAT CCCGATCGTCCTGCGCCCACCGCCGTCCAGAGCCCGGACTCGCCCCCGCCGTCGAGTCCCCCGCCCGACAACAAG GGCGGCGCCAAGACGGGTGGCATTGTGGCGGGCTGCGTCGCCGCCGCCGTCGTCGCCCTCCTCATCGGCGCCGCC ATCTTCTTCTTCGTGCGACGGAAGCGCAACGCCGAGATCGAGGAGGAGCATCGCCGCAATGCCGCCGTCAATGCC TTCATCAATGGCTCCAAGCCGCCGGGCAGCAGTGGAAGCATCTCCATGACCGACGCCCGGCTCGACCCCGTCCTG GCCAACCGTCGCATGAGCGACGGCAGCATTGCCGACAACGAAGACTACTCGCGCAGGATCCTTCGGGTTACCAAT GCATGA |
| Transcript | >Hirsu2|2161 ATGCGGTGCTCGACAATCGCCTGCGCCGCCCTGCTGGCGGCGGCACAAGCCTGCGGCGCCGCCGACTCGCCTACT CACCTCGTCGTCGACAAGCGTGCCACTCTCGTCCAGCGCCAAGAAAACGACCCCCCGAAACAGAGCCCTTCGACG TTTCCTCGGCCGAACGCGCCCACGTCCCATGGCTGCTACAAGTCGGCTGGCAACATGACGACGCACAATGTCGAG AACATGTCGTCCGGCTCCTGCAACGAAAAGTGCAAGTCGGGCAAATTCTCCGTCTCGGGCCTCCAGGGCCCCAAC TGCTTCTGTGGCTTTGCCTATCCGCCAGACAACGCCGTCGTCGACGACAAGAAATGCGGCTACCCATGTCCCTCG TACCCCCTCGAAGCCTGCGGCGGACTCGGCCAGCCTGGCTTCTGGTCCGTCTTCAACACGGGCGTCAACGTCAAT CCGCCGACCTACGACGAAGCCTCTTCCACCTCGTCGAGCGCGTCCCAGCCCACGAGTCCGCCCAAGTCGGACGAT CCCGATCGTCCTGCGCCCACCGCCGTCCAGAGCCCGGACTCGCCCCCGCCGTCGAGTCCCCCGCCCGACAACAAG GGCGGCGCCAAGACGGGTGGCATTGTGGCGGGCTGCGTCGCCGCCGCCGTCGTCGCCCTCCTCATCGGCGCCGCC ATCTTCTTCTTCGTGCGACGGAAGCGCAACGCCGAGATCGAGGAGGAGCATCGCCGCAATGCCGCCGTCAATGCC TTCATCAATGGCTCCAAGCCGCCGGGCAGCAGTGGAAGCATCTCCATGACCGACGCCCGGCTCGACCCCGTCCTG GCCAACCGTCGCATGAGCGACGGCAGCATTGCCGACAACGAAGACTACTCGCGCAGGATCCTTCGGGTTACCAAT GCATGA |
| Gene | >Hirsu2|2161 ATGCGGTGCTCGACAATCGCCTGCGCCGCCCTGCTGGCGGCGGCACAAGCCTGCGGCGCCGCCGACTCGCCTACT CACCTCGTCGTCGACAAGCGTGCCACTCTCGTCCAGCGCCAAGAAAACGACCCCCCGAAACAGAGCCCTTCGACG TTTCCTCGGCCGAACGCGCCCACGTCCCATGGCTGCTACAAGTCGGCTGGCAACATGACGACGCACAATGTCGAG AACATGTCGTCCGGCTCCTGCAACGAAAAGTGCAAGTCGGGCAAATTCTCCGTCTCGGGCCTCCAGGGCCCCAAC TGCTTCTGTGGCTTTGCCTATCCGCCAGACAACGCCGTCGTCGACGACAAGAAATGCGGCTACCCATGTCCCTCG TACCCCCTCGAAGCCTGCGGCGGACTCGGCCAGCCTGGCTTCTGGTCCGTCTTCAACACGGGCGTCAACGTCAAT CCGCCGACCTACGACGAAGCCTCTTCCACCTCGTCGAGCGCGTCCCAGCCCACGAGTCCGCCCAAGTCGGACGAT CCCGATCGTCCTGCGCCCACCGCCGTCCAGAGCCCGGACTCGCCCCCGCCGTCGAGTCCCCCGCCCGACAACAAG GGCGGCGCCAAGACGGGTGGCATTGTGGCGGGCTGCGTCGCCGCCGCCGTCGTCGCCCTCCTCATCGGCGCCGCC ATCTTCTTCTTCGTGCGACGGAAGCGCAACGCCGAGATCGAGGAGGAGCATCGCCGCAATGCCGCCGTCAATGCC TTCATCAATGGCTCCAAGCCGCCGGGCAGCAGTGGAAGCATCTCCATGACCGACGCCCGGCTCGACCCCGTCCTG GCCAACCGTCGCATGAGCGACGGCAGCATTGCCGACAACGAAGACTACTCGCGCAGGATCCTTCGGGTATGATGC CGCGCCCACCTTCCTGTCTGCCTTTTATCTGACCAAAGCTTCGCACAGGTTACCAATGCATGA |