Protein ID | Hirsu2|2156 |
Gene name | |
Location | Contig_15:75602..76218 |
Strand | - |
Gene length (bp) | 616 |
Transcript length (bp) | 459 |
Coding sequence length (bp) | 459 |
Protein length (aa) | 153 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02775 | TPP_enzyme_C | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 8.6E-12 | 18 | 142 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003824 | catalytic activity | Yes |
GO:0030976 | thiamine pyrophosphate binding | Yes |
GO:0036094 | small molecule binding | No |
GO:0043168 | anion binding | No |
GO:0019842 | vitamin binding | No |
GO:0097159 | organic cyclic compound binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0005488 | binding | No |
GO:0043167 | ion binding | No |
GO:1901681 | sulfur compound binding | No |
GO:0043169 | cation binding | No |
GO:0003674 | molecular_function | No |
GO:0050997 | quaternary ammonium group binding | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm|Nucleus | Nuclear localization signal | 0.5842 | 0.6196 | 0.1478 | 0.1543 | 0.3352 | 0.0662 | 0.0661 | 0.1977 | 0.237 | 0.0066 |
Orthofinder run ID | 4 |
Orthogroup | 7516 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps subramaniannii | Hirsu2|2156 (this protein) |
Ophiocordyceps subramaniannii | Hirsu2|3566 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2156 MALADLGGPGPEGGPGLVCQIVGDGSFMCAAPSSALWVASKYKIPVLTIVLNNGGWKAPRNSAQLVYPDGLSATA SDDEINISFRPTPNYAALAEAAAGSEAGWSPAPDRAAPDAWMQGVRVRTVRELREALARAATRLVDEKRGMLVEI LL* |
Coding | >Hirsu2|2156 ATGGCCCTGGCCGACCTCGGCGGCCCCGGCCCTGAGGGGGGCCCGGGCCTCGTGTGCCAGATCGTGGGCGACGGA AGCTTCATGTGCGCCGCCCCGTCGAGCGCCCTGTGGGTGGCGAGCAAGTATAAGATTCCCGTCTTGACCATTGTC TTGAACAACGGGGGCTGGAAAGCGCCGCGAAACTCGGCCCAGCTCGTCTACCCGGACGGCCTCAGCGCCACCGCC TCCGACGACGAAATAAACATCTCCTTCCGCCCCACGCCCAACTACGCTGCTCTGGCCGAGGCCGCCGCCGGCTCC GAGGCCGGCTGGTCGCCTGCGCCGGATCGCGCCGCGCCGGATGCGTGGATGCAGGGCGTGCGGGTCCGCACGGTG CGCGAGCTCAGGGAGGCGCTCGCGCGTGCCGCGACGAGGCTTGTCGACGAGAAGAGGGGGATGCTGGTCGAGATA CTGCTGTAG |
Transcript | >Hirsu2|2156 ATGGCCCTGGCCGACCTCGGCGGCCCCGGCCCTGAGGGGGGCCCGGGCCTCGTGTGCCAGATCGTGGGCGACGGA AGCTTCATGTGCGCCGCCCCGTCGAGCGCCCTGTGGGTGGCGAGCAAGTATAAGATTCCCGTCTTGACCATTGTC TTGAACAACGGGGGCTGGAAAGCGCCGCGAAACTCGGCCCAGCTCGTCTACCCGGACGGCCTCAGCGCCACCGCC TCCGACGACGAAATAAACATCTCCTTCCGCCCCACGCCCAACTACGCTGCTCTGGCCGAGGCCGCCGCCGGCTCC GAGGCCGGCTGGTCGCCTGCGCCGGATCGCGCCGCGCCGGATGCGTGGATGCAGGGCGTGCGGGTCCGCACGGTG CGCGAGCTCAGGGAGGCGCTCGCGCGTGCCGCGACGAGGCTTGTCGACGAGAAGAGGGGGATGCTGGTCGAGATA CTGCTGTAG |
Gene | >Hirsu2|2156 ATGGCCCTGGCCGACCTCGGCGGCCCCGGCCCTGAGGGGGGCCCGGGCCTCGTGTGCCAGATCGTGGGCGACGGA AGCTTCATGTGCGCCGCCCCGTCGAGCGCCCTGTGGGTGGCGAGCAAGTATAAGATTCCCGTCTTGACCATTGTC TTGAACAACGGGGGTGAGTTTCGCCCACCTCTCTACCTCCCTCCCTTCCTCCCTCTTTCTCATACCCTGACCTCT CCCACTCTCTCCCTGTCTCTTACCATCCCCTGATCTCTCCAACTCTCTACCCACCTGCGTGCGTCGAGCCTCGGC TTCGGCTGACCGGTTTGCAGGCTGGAAAGCGCCGCGAAACTCGGCCCAGCTCGTCTACCCGGACGGCCTCAGCGC CACCGCCTCCGACGACGAAATAAACATCTCCTTCCGCCCCACGCCCAACTACGCTGCTCTGGCCGAGGCCGCCGC CGGCTCCGAGGCCGGCTGGTCGCCTGCGCCGGATCGCGCCGCGCCGGATGCGTGGATGCAGGGCGTGCGGGTCCG CACGGTGCGCGAGCTCAGGGAGGCGCTCGCGCGTGCCGCGACGAGGCTTGTCGACGAGAAGAGGGGGATGCTGGT CGAGATACTGCTGTAG |