© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2146 |
| Gene name | |
| Location | Contig_15:43141..44226 |
| Strand | + |
| Gene length (bp) | 1085 |
| Transcript length (bp) | 756 |
| Coding sequence length (bp) | 756 |
| Protein length (aa) | 252 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF11807 | UstYa | Mycotoxin biosynthesis protein UstYa | 2.6E-22 | 48 | 168 |
| PF11807 | UstYa | Mycotoxin biosynthesis protein UstYa | 3.0E-11 | 176 | 218 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0043386 | mycotoxin biosynthetic process | Yes |
| GO:0008152 | metabolic process | No |
| GO:0009404 | toxin metabolic process | No |
| GO:0019748 | secondary metabolic process | No |
| GO:0009987 | cellular process | No |
| GO:0009403 | toxin biosynthetic process | No |
| GO:0044249 | cellular biosynthetic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0009058 | biosynthetic process | No |
| GO:0044550 | secondary metabolite biosynthetic process | No |
| GO:0008150 | biological_process | No |
| GO:0043385 | mycotoxin metabolic process | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Golgi apparatus | Signal peptide|Transmembrane domain | 0.1796 | 0.128 | 0.1662 | 0.3366 | 0.0419 | 0.0029 | 0.2656 | 0.5453 | 0.6222 | 0.0129 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 46 | 68 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 114 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2146 MPQFRDAPSDPERLLGRGKSSEDTMSSEELPPMTFRPKGRGRCPSITRQLTIHLCLAAIYLTIFFALWDYKGCGC RRRHKTGLHAYSPAWEALKWEPRILQNEIEIKNPFKGLPRPEMDEAWNKLLGPTAIRVSKEDLEKINRTSVALED GSGYMGGLDVYHQLHCLKKTWASTLYVMCNADLSILTFDWIPNFHRPWPNFRIVHECANWESIEDWAWAHNFDGD ESLLKHPNFHPELPGPFDYSESGNDV* |
| Coding | >Hirsu2|2146 ATGCCTCAGTTCCGCGATGCCCCGTCCGATCCCGAACGCCTCCTGGGTCGAGGCAAGAGTTCGGAAGACACAATG TCAAGCGAGGAGCTTCCGCCCATGACCTTTCGGCCTAAGGGCAGAGGGCGTTGCCCGTCCATAACAAGACAATTG ACAATACATCTCTGTCTTGCGGCTATCTACTTAACCATATTTTTTGCCCTCTGGGATTACAAAGGTTGCGGTTGC CGAAGGAGGCACAAGACCGGGCTACACGCTTACAGTCCTGCTTGGGAGGCGCTGAAATGGGAGCCTCGAATACTG CAGAATGAGATTGAAATCAAAAACCCCTTTAAGGGGCTTCCGAGGCCAGAGATGGACGAGGCATGGAACAAACTT CTTGGCCCGACCGCCATTCGAGTGAGTAAAGAGGACCTGGAGAAGATCAATCGTACCTCTGTTGCGCTAGAGGAT GGATCCGGGTACATGGGCGGTCTCGACGTCTATCATCAGCTACACTGCCTTAAAAAAACATGGGCCAGCACATTG TATGTCATGTGCAATGCCGACCTTTCGATCCTGACATTCGACTGGATTCCGAATTTCCATCGCCCATGGCCCAAC TTCCGCATCGTTCACGAGTGCGCCAACTGGGAGTCTATCGAAGACTGGGCTTGGGCGCATAACTTTGACGGGGAC GAATCCCTCCTCAAACATCCAAATTTTCACCCAGAGTTACCTGGCCCATTTGATTATTCTGAAAGTGGTAACGAC GTATAA |
| Transcript | >Hirsu2|2146 ATGCCTCAGTTCCGCGATGCCCCGTCCGATCCCGAACGCCTCCTGGGTCGAGGCAAGAGTTCGGAAGACACAATG TCAAGCGAGGAGCTTCCGCCCATGACCTTTCGGCCTAAGGGCAGAGGGCGTTGCCCGTCCATAACAAGACAATTG ACAATACATCTCTGTCTTGCGGCTATCTACTTAACCATATTTTTTGCCCTCTGGGATTACAAAGGTTGCGGTTGC CGAAGGAGGCACAAGACCGGGCTACACGCTTACAGTCCTGCTTGGGAGGCGCTGAAATGGGAGCCTCGAATACTG CAGAATGAGATTGAAATCAAAAACCCCTTTAAGGGGCTTCCGAGGCCAGAGATGGACGAGGCATGGAACAAACTT CTTGGCCCGACCGCCATTCGAGTGAGTAAAGAGGACCTGGAGAAGATCAATCGTACCTCTGTTGCGCTAGAGGAT GGATCCGGGTACATGGGCGGTCTCGACGTCTATCATCAGCTACACTGCCTTAAAAAAACATGGGCCAGCACATTG TATGTCATGTGCAATGCCGACCTTTCGATCCTGACATTCGACTGGATTCCGAATTTCCATCGCCCATGGCCCAAC TTCCGCATCGTTCACGAGTGCGCCAACTGGGAGTCTATCGAAGACTGGGCTTGGGCGCATAACTTTGACGGGGAC GAATCCCTCCTCAAACATCCAAATTTTCACCCAGAGTTACCTGGCCCATTTGATTATTCTGAAAGTGGTAACGAC GTATAA |
| Gene | >Hirsu2|2146 ATGCCTCAGTTCCGCGATGCCCCGTCCGATCCCGAACGCCTCCTGGGTCGAGGCAAGAGTTCGGAAGACACAATG TCAAGCGAGGAGCTTCCGCCCATGACCTTTCGGCCTAAGGGCAGAGGGCGTTGCCCGTCCATAACAAGACAATTG ACAATACATCTCTGTCTTGCGGCTATCTACTTAACCATATTTTTTGCCCTCTGGGATTACAAAGGTTGCGGTTGC CGAAGGAGGCACAAGACCGGGCTACACGCTTACAGTGAGTAAAAGACTATCAATCGTGTTTACGGTGCCAACTGC TGACACTTCTGCCAGGTCCTGCTTGGGAGGCGCTGAAATGGGAGCCTCGAATACTGCAGAATGAGATTGAAATCA AAAACCCCTTTAAGGGGCTTCCGAGGCCAGAGATGGACGAGGCATGGAACAAACTTCTTGGCCCGACCGCCATTC GAGTGAGTAAAGAGGACCTGGAGAAGATCAATCGTACCTCTGTTGCGCTAGAGGATGGATCCGGGTACATGGGCG GTCTCGACGTCTATCATCAGCTACACTGCCTTGTAAGCTGACCGCTGGGACCATTTGCTGCTCTTGCACCGCAGA ACTGACATTCTTGCCAGAGATACGTCAGGAGGTATCTCCACAAAGATTACTATAACATGACCAAAGAAAAAAACA TGGGCCAGCACATTGGTAAGTCGCTCGTCGGCCCTGGGAGTTCACGAAGGGGCCTATTCTACGTTCGTGTCCATG CTGCTCACGCGCCGTAAAAGATCACTGTCTGGATAGCCTTCGACAGTATGTCATGTGCAATGCCGACCTTTCGAT CCTGACATTCGACTGGATTCCGAATTTCCATCGCCCATGGCCCAACTTCCGCATCGTTCACGAGTGCGCCAACTG GGAGTCTATCGAAGACTGGGCTTGGGCGCATAACTTTGACGGGGACGAATCCCTCCTCAAACATCCAAATTTTCA CCCAGAGTTACGTGAGTGAAACCCGGACGTATTCTACTTCATGTGCTGTAATGGCTGACCTGAAGTTAGCTGGCC CATTTGATTATTCTGAAAGTGGTAACGACGTATAA |