Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2144
Gene name
LocationContig_15:40412..41230
Strand+
Gene length (bp)818
Transcript length (bp)753
Coding sequence length (bp)753
Protein length (aa) 251

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 58 0.45

Transmembrane Domains

Domain # Start End Length
1 70 92 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2144
MSFLYAKPKDASDHTSPRSSIDAGEANNSAEFQQETKAFLAPPERGEDVDQEEAIDPGHRSKIFRCVLQVIILLL
SLGLLFAGYDLYRAITASRASASLESSDQPRPCGDDPLTARSKGCLFDPIAMAWLPNECHDFELTKEFLEMEHWQ
FWAQPVDGQAFSLANVYQGLHSALFVRESYLRHRCVFAWRKIHRAIINTTAIDGYATDWDGIRKCEELFKGSEGD
DKVLHKVNVGYPTCTAQRPVAERQI*
Coding >Hirsu2|2144
ATGTCCTTCCTCTATGCAAAGCCGAAGGATGCCAGCGACCATACAAGCCCAAGGTCTAGCATCGATGCTGGCGAG
GCCAATAACTCGGCGGAGTTCCAGCAGGAAACCAAGGCTTTCCTGGCGCCTCCTGAGCGAGGCGAAGACGTTGAC
CAGGAGGAGGCCATAGACCCGGGCCATCGATCGAAGATCTTCCGCTGTGTGCTACAAGTCATCATTTTGCTTCTC
AGTCTGGGCCTTTTATTCGCAGGGTACGACTTGTATCGCGCCATCACGGCATCTCGAGCATCGGCTTCCCTTGAA
AGCAGCGACCAGCCTCGGCCTTGCGGAGACGATCCACTCACAGCTCGATCCAAGGGCTGCTTATTTGATCCTATT
GCGATGGCATGGCTGCCGAACGAATGCCACGACTTTGAACTGACCAAAGAGTTCCTCGAGATGGAGCACTGGCAA
TTCTGGGCACAGCCTGTCGACGGCCAGGCTTTTTCCCTGGCGAATGTCTACCAAGGCCTTCACTCGGCCCTCTTC
GTCCGCGAATCTTACCTGCGCCATCGTTGCGTCTTCGCCTGGAGAAAGATTCACCGTGCCATCATCAATACGACG
GCAATAGACGGATATGCGACTGACTGGGATGGAATCCGGAAATGCGAGGAGCTTTTCAAGGGCAGTGAGGGCGAT
GACAAGGTGTTGCACAAGGTCAATGTGGGCTATCCGACTTGCACCGCGCAGCGGCCAGTCGCTGAACGTCAGATT
TGA
Transcript >Hirsu2|2144
ATGTCCTTCCTCTATGCAAAGCCGAAGGATGCCAGCGACCATACAAGCCCAAGGTCTAGCATCGATGCTGGCGAG
GCCAATAACTCGGCGGAGTTCCAGCAGGAAACCAAGGCTTTCCTGGCGCCTCCTGAGCGAGGCGAAGACGTTGAC
CAGGAGGAGGCCATAGACCCGGGCCATCGATCGAAGATCTTCCGCTGTGTGCTACAAGTCATCATTTTGCTTCTC
AGTCTGGGCCTTTTATTCGCAGGGTACGACTTGTATCGCGCCATCACGGCATCTCGAGCATCGGCTTCCCTTGAA
AGCAGCGACCAGCCTCGGCCTTGCGGAGACGATCCACTCACAGCTCGATCCAAGGGCTGCTTATTTGATCCTATT
GCGATGGCATGGCTGCCGAACGAATGCCACGACTTTGAACTGACCAAAGAGTTCCTCGAGATGGAGCACTGGCAA
TTCTGGGCACAGCCTGTCGACGGCCAGGCTTTTTCCCTGGCGAATGTCTACCAAGGCCTTCACTCGGCCCTCTTC
GTCCGCGAATCTTACCTGCGCCATCGTTGCGTCTTCGCCTGGAGAAAGATTCACCGTGCCATCATCAATACGACG
GCAATAGACGGATATGCGACTGACTGGGATGGAATCCGGAAATGCGAGGAGCTTTTCAAGGGCAGTGAGGGCGAT
GACAAGGTGTTGCACAAGGTCAATGTGGGCTATCCGACTTGCACCGCGCAGCGGCCAGTCGCTGAACGTCAGATT
TGA
Gene >Hirsu2|2144
ATGTCCTTCCTCTATGGTGAGGTTGTTTCCAAGACCCAAGCAACGTCTGTCGCTAATTTTTGCTCTTTGCCGCCG
AGACAGCAAAGCCGAAGGATGCCAGCGACCATACAAGCCCAAGGTCTAGCATCGATGCTGGCGAGGCCAATAACT
CGGCGGAGTTCCAGCAGGAAACCAAGGCTTTCCTGGCGCCTCCTGAGCGAGGCGAAGACGTTGACCAGGAGGAGG
CCATAGACCCGGGCCATCGATCGAAGATCTTCCGCTGTGTGCTACAAGTCATCATTTTGCTTCTCAGTCTGGGCC
TTTTATTCGCAGGGTACGACTTGTATCGCGCCATCACGGCATCTCGAGCATCGGCTTCCCTTGAAAGCAGCGACC
AGCCTCGGCCTTGCGGAGACGATCCACTCACAGCTCGATCCAAGGGCTGCTTATTTGATCCTATTGCGATGGCAT
GGCTGCCGAACGAATGCCACGACTTTGAACTGACCAAAGAGTTCCTCGAGATGGAGCACTGGCAATTCTGGGCAC
AGCCTGTCGACGGCCAGGCTTTTTCCCTGGCGAATGTCTACCAAGGCCTTCACTCGGCCCTCTTCGTCCGCGAAT
CTTACCTGCGCCATCGTTGCGTCTTCGCCTGGAGAAAGATTCACCGTGCCATCATCAATACGACGGCAATAGACG
GATATGCGACTGACTGGGATGGAATCCGGAAATGCGAGGAGCTTTTCAAGGGCAGTGAGGGCGATGACAAGGTGT
TGCACAAGGTCAATGTGGGCTATCCGACTTGCACCGCGCAGCGGCCAGTCGCTGAACGTCAGATTTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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