Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2143
Gene name
LocationContig_15:39164..39950
Strand-
Gene length (bp)786
Transcript length (bp)729
Coding sequence length (bp)729
Protein length (aa) 243

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 47 69 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2143
MDKSTAHFFRPLWQRVKNASKSRSKQVQKRSNGERSRFRIVQEAQRNGGMVAAILILSVLTIVVEIAAHAGPSVS
PDRPPWPQRASHQEQVPVHLTRNHCGSSTAEAQELGCRFDELSFAWQVPECFDQRTIDEFLAAGRWEYFTDDEGK
TKVPHDDLALTLGREAAVHVTWAFHITHCLYLRRQMVRVLERGGAMDNHLGAYKHTVHCGKTMLNSAGMADNLHT
QAPVIYPLCKPLRDWRA*
Coding >Hirsu2|2143
ATGGACAAGTCTACGGCACACTTCTTCCGGCCCCTCTGGCAGCGGGTGAAGAACGCGTCAAAGTCACGGTCAAAG
CAAGTTCAGAAGCGGAGCAATGGCGAGCGCAGCAGATTCCGCATCGTGCAAGAAGCGCAACGAAACGGCGGCATG
GTTGCGGCAATACTGATCCTCTCGGTCTTGACTATCGTCGTCGAGATCGCTGCTCACGCCGGCCCCTCTGTCTCT
CCCGATAGACCGCCGTGGCCGCAGAGGGCAAGCCACCAGGAACAGGTCCCAGTCCACCTGACGCGGAACCACTGC
GGCTCCTCGACAGCGGAGGCGCAAGAGCTGGGCTGCCGCTTTGACGAGCTCAGCTTCGCCTGGCAGGTCCCCGAG
TGCTTCGACCAGAGGACCATCGACGAGTTTCTGGCGGCCGGCCGGTGGGAGTACTTCACGGACGACGAGGGCAAG
ACAAAGGTGCCGCACGACGATCTAGCCCTCACCCTTGGCCGCGAGGCCGCCGTGCACGTCACTTGGGCGTTCCAC
ATCACCCATTGCCTCTATCTGCGGCGGCAGATGGTCAGGGTGCTCGAGCGTGGAGGGGCAATGGACAACCACCTC
GGGGCGTACAAGCACACAGTCCACTGCGGCAAGACGATGCTCAACTCAGCTGGCATGGCGGACAATCTGCACACG
CAGGCACCGGTTATCTACCCGTTGTGCAAACCGCTGCGGGATTGGAGGGCTTAA
Transcript >Hirsu2|2143
ATGGACAAGTCTACGGCACACTTCTTCCGGCCCCTCTGGCAGCGGGTGAAGAACGCGTCAAAGTCACGGTCAAAG
CAAGTTCAGAAGCGGAGCAATGGCGAGCGCAGCAGATTCCGCATCGTGCAAGAAGCGCAACGAAACGGCGGCATG
GTTGCGGCAATACTGATCCTCTCGGTCTTGACTATCGTCGTCGAGATCGCTGCTCACGCCGGCCCCTCTGTCTCT
CCCGATAGACCGCCGTGGCCGCAGAGGGCAAGCCACCAGGAACAGGTCCCAGTCCACCTGACGCGGAACCACTGC
GGCTCCTCGACAGCGGAGGCGCAAGAGCTGGGCTGCCGCTTTGACGAGCTCAGCTTCGCCTGGCAGGTCCCCGAG
TGCTTCGACCAGAGGACCATCGACGAGTTTCTGGCGGCCGGCCGGTGGGAGTACTTCACGGACGACGAGGGCAAG
ACAAAGGTGCCGCACGACGATCTAGCCCTCACCCTTGGCCGCGAGGCCGCCGTGCACGTCACTTGGGCGTTCCAC
ATCACCCATTGCCTCTATCTGCGGCGGCAGATGGTCAGGGTGCTCGAGCGTGGAGGGGCAATGGACAACCACCTC
GGGGCGTACAAGCACACAGTCCACTGCGGCAAGACGATGCTCAACTCAGCTGGCATGGCGGACAATCTGCACACG
CAGGCACCGGTTATCTACCCGTTGTGCAAACCGCTGCGGGATTGGAGGGCTTAA
Gene >Hirsu2|2143
ATGGACAAGTCTACGGGTAAGCAGCGTAACGCAGGGACCTATTGATGAGCTATGGCTGAACTGGCGAGCCAAGCA
CACTTCTTCCGGCCCCTCTGGCAGCGGGTGAAGAACGCGTCAAAGTCACGGTCAAAGCAAGTTCAGAAGCGGAGC
AATGGCGAGCGCAGCAGATTCCGCATCGTGCAAGAAGCGCAACGAAACGGCGGCATGGTTGCGGCAATACTGATC
CTCTCGGTCTTGACTATCGTCGTCGAGATCGCTGCTCACGCCGGCCCCTCTGTCTCTCCCGATAGACCGCCGTGG
CCGCAGAGGGCAAGCCACCAGGAACAGGTCCCAGTCCACCTGACGCGGAACCACTGCGGCTCCTCGACAGCGGAG
GCGCAAGAGCTGGGCTGCCGCTTTGACGAGCTCAGCTTCGCCTGGCAGGTCCCCGAGTGCTTCGACCAGAGGACC
ATCGACGAGTTTCTGGCGGCCGGCCGGTGGGAGTACTTCACGGACGACGAGGGCAAGACAAAGGTGCCGCACGAC
GATCTAGCCCTCACCCTTGGCCGCGAGGCCGCCGTGCACGTCACTTGGGCGTTCCACATCACCCATTGCCTCTAT
CTGCGGCGGCAGATGGTCAGGGTGCTCGAGCGTGGAGGGGCAATGGACAACCACCTCGGGGCGTACAAGCACACA
GTCCACTGCGGCAAGACGATGCTCAACTCAGCTGGCATGGCGGACAATCTGCACACGCAGGCACCGGTTATCTAC
CCGTTGTGCAAACCGCTGCGGGATTGGAGGGCTTAA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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