Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2138
Gene name
LocationContig_15:21139..22534
Strand-
Gene length (bp)1395
Transcript length (bp)1395
Coding sequence length (bp)1395
Protein length (aa) 465

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16010 CDH-cyt Cytochrome domain of cellobiose dehydrogenase 1.0E-08 36 202

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Lysosome/Vacuole Signal peptide 0.0912 0.0742 0.3539 0.3691 0.0806 0.0159 0.3228 0.7194 0.5088 0.0054

SignalP

SignalP signal predicted Location Score
Yes 1 - 21 0.999777

Transmembrane Domains

Domain # Start End Length
1 254 276 22
2 289 311 22
3 321 340 19
4 360 382 22
5 387 409 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

Gene cluster ID Type of secondary metabolism gene
Cluster 10 (None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6970
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis map64 (Brazil) OphauB2|5790
Ophiocordyceps kimflemingae Ophio5|5457
Ophiocordyceps subramaniannii Hirsu2|2138 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2138
MALSQRSFAFLLLRVLAVTLAEPVQYCRFGHGHGQIDFCAAMVMHQNQSTSAHDLYLSMTVTRSSPLGWTAIGTG
SVMAGSLMFIVYGDAESGQGPIVSIRTVPAGHAQPRPVDQDDTGPSDIRVVQSTWAAADGTHDDPTWQANIAVVC
YACTRFPSAALSAAATSVPWIWAWNDKQRHSVYSVDAELDMHKHHAGNGGWGNFYVDMARSVSEGERPPSWPRVR
PGIAMLGASDWPSGVASSASALDGNGNPLARLHGLFMATAFLFIFPLGVAAMRSGSAQSFKYHWALQLIGTAFAE
AGAITGICMTGARVASTTRTHGPLGVSVAVLLLVQALAGWRHHVVFVRIRRRTWISHLHIWLGRVSLVASWVNLV
SGLILAGAGRSRVAAMGCFIVLDALGLAIFLWLSKRSARTGSASATAASRDNVDKYFVLGTASDDEDGGEGGGGE
SRELQSVVTCPRFT*
Coding >Hirsu2|2138
ATGGCTCTATCCCAACGTTCGTTCGCCTTCCTACTCTTGCGAGTCTTGGCCGTGACACTTGCCGAGCCGGTGCAG
TACTGCCGCTTCGGTCACGGCCATGGCCAGATCGACTTCTGCGCGGCCATGGTCATGCACCAGAACCAGTCGACG
TCGGCTCACGATCTGTACCTCAGCATGACGGTGACGCGGTCTTCGCCTCTGGGATGGACCGCCATCGGCACGGGG
TCCGTCATGGCCGGCTCCCTCATGTTCATCGTTTACGGTGATGCCGAGTCGGGGCAGGGCCCCATCGTCAGCATC
CGCACCGTCCCTGCCGGACACGCCCAGCCGAGGCCTGTCGACCAGGACGATACGGGCCCGTCGGATATCCGTGTC
GTGCAGTCGACCTGGGCTGCCGCCGACGGTACTCACGATGACCCGACGTGGCAGGCGAACATTGCCGTGGTATGC
TACGCCTGCACGCGGTTCCCCAGCGCCGCCCTGTCTGCGGCCGCGACGTCGGTGCCGTGGATCTGGGCCTGGAAT
GACAAGCAGCGGCACAGCGTCTATTCGGTCGACGCCGAGCTCGATATGCACAAGCACCACGCCGGCAACGGCGGC
TGGGGCAACTTCTACGTCGACATGGCTCGCTCCGTCAGCGAAGGCGAGCGGCCTCCGTCATGGCCTCGTGTGCGC
CCGGGCATCGCCATGCTCGGAGCCTCGGACTGGCCAAGCGGCGTCGCGAGCTCGGCGTCGGCGCTCGATGGAAAT
GGAAACCCCCTTGCCCGGCTGCACGGCCTCTTCATGGCCACGGCCTTCCTCTTCATCTTCCCGCTGGGCGTTGCG
GCCATGCGGTCCGGGTCGGCGCAGTCGTTCAAGTACCACTGGGCTCTGCAGCTCATAGGCACCGCATTCGCCGAG
GCCGGAGCCATCACGGGCATCTGCATGACGGGCGCCCGTGTTGCTTCCACGACCCGGACCCATGGGCCCCTGGGC
GTCTCCGTGGCAGTGCTGCTCCTGGTCCAGGCGTTAGCGGGATGGAGGCATCACGTGGTTTTCGTGCGAATCCGG
CGCCGAACTTGGATTTCTCATCTCCACATCTGGCTGGGCCGCGTCAGCCTCGTCGCTAGCTGGGTCAACCTCGTT
TCTGGCCTGATTCTGGCCGGCGCAGGCCGCAGCCGAGTGGCCGCCATGGGCTGCTTCATCGTCCTGGACGCGCTC
GGTCTGGCCATCTTTCTATGGCTCTCGAAGCGCAGCGCAAGGACAGGCTCAGCATCGGCAACTGCGGCGAGCAGG
GACAACGTCGATAAGTATTTCGTCTTGGGCACGGCAAGCGATGATGAAGACGGAGGTGAAGGAGGGGGAGGAGAG
TCGAGAGAATTGCAGTCGGTTGTCACGTGTCCTCGCTTTACATAA
Transcript >Hirsu2|2138
ATGGCTCTATCCCAACGTTCGTTCGCCTTCCTACTCTTGCGAGTCTTGGCCGTGACACTTGCCGAGCCGGTGCAG
TACTGCCGCTTCGGTCACGGCCATGGCCAGATCGACTTCTGCGCGGCCATGGTCATGCACCAGAACCAGTCGACG
TCGGCTCACGATCTGTACCTCAGCATGACGGTGACGCGGTCTTCGCCTCTGGGATGGACCGCCATCGGCACGGGG
TCCGTCATGGCCGGCTCCCTCATGTTCATCGTTTACGGTGATGCCGAGTCGGGGCAGGGCCCCATCGTCAGCATC
CGCACCGTCCCTGCCGGACACGCCCAGCCGAGGCCTGTCGACCAGGACGATACGGGCCCGTCGGATATCCGTGTC
GTGCAGTCGACCTGGGCTGCCGCCGACGGTACTCACGATGACCCGACGTGGCAGGCGAACATTGCCGTGGTATGC
TACGCCTGCACGCGGTTCCCCAGCGCCGCCCTGTCTGCGGCCGCGACGTCGGTGCCGTGGATCTGGGCCTGGAAT
GACAAGCAGCGGCACAGCGTCTATTCGGTCGACGCCGAGCTCGATATGCACAAGCACCACGCCGGCAACGGCGGC
TGGGGCAACTTCTACGTCGACATGGCTCGCTCCGTCAGCGAAGGCGAGCGGCCTCCGTCATGGCCTCGTGTGCGC
CCGGGCATCGCCATGCTCGGAGCCTCGGACTGGCCAAGCGGCGTCGCGAGCTCGGCGTCGGCGCTCGATGGAAAT
GGAAACCCCCTTGCCCGGCTGCACGGCCTCTTCATGGCCACGGCCTTCCTCTTCATCTTCCCGCTGGGCGTTGCG
GCCATGCGGTCCGGGTCGGCGCAGTCGTTCAAGTACCACTGGGCTCTGCAGCTCATAGGCACCGCATTCGCCGAG
GCCGGAGCCATCACGGGCATCTGCATGACGGGCGCCCGTGTTGCTTCCACGACCCGGACCCATGGGCCCCTGGGC
GTCTCCGTGGCAGTGCTGCTCCTGGTCCAGGCGTTAGCGGGATGGAGGCATCACGTGGTTTTCGTGCGAATCCGG
CGCCGAACTTGGATTTCTCATCTCCACATCTGGCTGGGCCGCGTCAGCCTCGTCGCTAGCTGGGTCAACCTCGTT
TCTGGCCTGATTCTGGCCGGCGCAGGCCGCAGCCGAGTGGCCGCCATGGGCTGCTTCATCGTCCTGGACGCGCTC
GGTCTGGCCATCTTTCTATGGCTCTCGAAGCGCAGCGCAAGGACAGGCTCAGCATCGGCAACTGCGGCGAGCAGG
GACAACGTCGATAAGTATTTCGTCTTGGGCACGGCAAGCGATGATGAAGACGGAGGTGAAGGAGGGGGAGGAGAG
TCGAGAGAATTGCAGTCGGTTGTCACGTGTCCTCGCTTTACATAA
Gene >Hirsu2|2138
ATGGCTCTATCCCAACGTTCGTTCGCCTTCCTACTCTTGCGAGTCTTGGCCGTGACACTTGCCGAGCCGGTGCAG
TACTGCCGCTTCGGTCACGGCCATGGCCAGATCGACTTCTGCGCGGCCATGGTCATGCACCAGAACCAGTCGACG
TCGGCTCACGATCTGTACCTCAGCATGACGGTGACGCGGTCTTCGCCTCTGGGATGGACCGCCATCGGCACGGGG
TCCGTCATGGCCGGCTCCCTCATGTTCATCGTTTACGGTGATGCCGAGTCGGGGCAGGGCCCCATCGTCAGCATC
CGCACCGTCCCTGCCGGACACGCCCAGCCGAGGCCTGTCGACCAGGACGATACGGGCCCGTCGGATATCCGTGTC
GTGCAGTCGACCTGGGCTGCCGCCGACGGTACTCACGATGACCCGACGTGGCAGGCGAACATTGCCGTGGTATGC
TACGCCTGCACGCGGTTCCCCAGCGCCGCCCTGTCTGCGGCCGCGACGTCGGTGCCGTGGATCTGGGCCTGGAAT
GACAAGCAGCGGCACAGCGTCTATTCGGTCGACGCCGAGCTCGATATGCACAAGCACCACGCCGGCAACGGCGGC
TGGGGCAACTTCTACGTCGACATGGCTCGCTCCGTCAGCGAAGGCGAGCGGCCTCCGTCATGGCCTCGTGTGCGC
CCGGGCATCGCCATGCTCGGAGCCTCGGACTGGCCAAGCGGCGTCGCGAGCTCGGCGTCGGCGCTCGATGGAAAT
GGAAACCCCCTTGCCCGGCTGCACGGCCTCTTCATGGCCACGGCCTTCCTCTTCATCTTCCCGCTGGGCGTTGCG
GCCATGCGGTCCGGGTCGGCGCAGTCGTTCAAGTACCACTGGGCTCTGCAGCTCATAGGCACCGCATTCGCCGAG
GCCGGAGCCATCACGGGCATCTGCATGACGGGCGCCCGTGTTGCTTCCACGACCCGGACCCATGGGCCCCTGGGC
GTCTCCGTGGCAGTGCTGCTCCTGGTCCAGGCGTTAGCGGGATGGAGGCATCACGTGGTTTTCGTGCGAATCCGG
CGCCGAACTTGGATTTCTCATCTCCACATCTGGCTGGGCCGCGTCAGCCTCGTCGCTAGCTGGGTCAACCTCGTT
TCTGGCCTGATTCTGGCCGGCGCAGGCCGCAGCCGAGTGGCCGCCATGGGCTGCTTCATCGTCCTGGACGCGCTC
GGTCTGGCCATCTTTCTATGGCTCTCGAAGCGCAGCGCAAGGACAGGCTCAGCATCGGCAACTGCGGCGAGCAGG
GACAACGTCGATAAGTATTTCGTCTTGGGCACGGCAAGCGATGATGAAGACGGAGGTGAAGGAGGGGGAGGAGAG
TCGAGAGAATTGCAGTCGGTTGTCACGTGTCCTCGCTTTACATAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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