Protein ID | Hirsu2|2138 |
Gene name | |
Location | Contig_15:21139..22534 |
Strand | - |
Gene length (bp) | 1395 |
Transcript length (bp) | 1395 |
Coding sequence length (bp) | 1395 |
Protein length (aa) | 465 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF16010 | CDH-cyt | Cytochrome domain of cellobiose dehydrogenase | 1.0E-08 | 36 | 202 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Lysosome/Vacuole | Signal peptide | 0.0912 | 0.0742 | 0.3539 | 0.3691 | 0.0806 | 0.0159 | 0.3228 | 0.7194 | 0.5088 | 0.0054 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 21 | 0.999777 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 254 | 276 | 22 |
2 | 289 | 311 | 22 |
3 | 321 | 340 | 19 |
4 | 360 | 382 | 22 |
5 | 387 | 409 | 22 |
Gene cluster ID | Type of secondary metabolism gene |
---|---|
Cluster 10 | (None) |
Orthofinder run ID | 4 |
Orthogroup | 6970 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps australis map64 (Brazil) | OphauB2|5790 |
Ophiocordyceps kimflemingae | Ophio5|5457 |
Ophiocordyceps subramaniannii | Hirsu2|2138 (this protein) |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2138 MALSQRSFAFLLLRVLAVTLAEPVQYCRFGHGHGQIDFCAAMVMHQNQSTSAHDLYLSMTVTRSSPLGWTAIGTG SVMAGSLMFIVYGDAESGQGPIVSIRTVPAGHAQPRPVDQDDTGPSDIRVVQSTWAAADGTHDDPTWQANIAVVC YACTRFPSAALSAAATSVPWIWAWNDKQRHSVYSVDAELDMHKHHAGNGGWGNFYVDMARSVSEGERPPSWPRVR PGIAMLGASDWPSGVASSASALDGNGNPLARLHGLFMATAFLFIFPLGVAAMRSGSAQSFKYHWALQLIGTAFAE AGAITGICMTGARVASTTRTHGPLGVSVAVLLLVQALAGWRHHVVFVRIRRRTWISHLHIWLGRVSLVASWVNLV SGLILAGAGRSRVAAMGCFIVLDALGLAIFLWLSKRSARTGSASATAASRDNVDKYFVLGTASDDEDGGEGGGGE SRELQSVVTCPRFT* |
Coding | >Hirsu2|2138 ATGGCTCTATCCCAACGTTCGTTCGCCTTCCTACTCTTGCGAGTCTTGGCCGTGACACTTGCCGAGCCGGTGCAG TACTGCCGCTTCGGTCACGGCCATGGCCAGATCGACTTCTGCGCGGCCATGGTCATGCACCAGAACCAGTCGACG TCGGCTCACGATCTGTACCTCAGCATGACGGTGACGCGGTCTTCGCCTCTGGGATGGACCGCCATCGGCACGGGG TCCGTCATGGCCGGCTCCCTCATGTTCATCGTTTACGGTGATGCCGAGTCGGGGCAGGGCCCCATCGTCAGCATC CGCACCGTCCCTGCCGGACACGCCCAGCCGAGGCCTGTCGACCAGGACGATACGGGCCCGTCGGATATCCGTGTC GTGCAGTCGACCTGGGCTGCCGCCGACGGTACTCACGATGACCCGACGTGGCAGGCGAACATTGCCGTGGTATGC TACGCCTGCACGCGGTTCCCCAGCGCCGCCCTGTCTGCGGCCGCGACGTCGGTGCCGTGGATCTGGGCCTGGAAT GACAAGCAGCGGCACAGCGTCTATTCGGTCGACGCCGAGCTCGATATGCACAAGCACCACGCCGGCAACGGCGGC TGGGGCAACTTCTACGTCGACATGGCTCGCTCCGTCAGCGAAGGCGAGCGGCCTCCGTCATGGCCTCGTGTGCGC CCGGGCATCGCCATGCTCGGAGCCTCGGACTGGCCAAGCGGCGTCGCGAGCTCGGCGTCGGCGCTCGATGGAAAT GGAAACCCCCTTGCCCGGCTGCACGGCCTCTTCATGGCCACGGCCTTCCTCTTCATCTTCCCGCTGGGCGTTGCG GCCATGCGGTCCGGGTCGGCGCAGTCGTTCAAGTACCACTGGGCTCTGCAGCTCATAGGCACCGCATTCGCCGAG GCCGGAGCCATCACGGGCATCTGCATGACGGGCGCCCGTGTTGCTTCCACGACCCGGACCCATGGGCCCCTGGGC GTCTCCGTGGCAGTGCTGCTCCTGGTCCAGGCGTTAGCGGGATGGAGGCATCACGTGGTTTTCGTGCGAATCCGG CGCCGAACTTGGATTTCTCATCTCCACATCTGGCTGGGCCGCGTCAGCCTCGTCGCTAGCTGGGTCAACCTCGTT TCTGGCCTGATTCTGGCCGGCGCAGGCCGCAGCCGAGTGGCCGCCATGGGCTGCTTCATCGTCCTGGACGCGCTC GGTCTGGCCATCTTTCTATGGCTCTCGAAGCGCAGCGCAAGGACAGGCTCAGCATCGGCAACTGCGGCGAGCAGG GACAACGTCGATAAGTATTTCGTCTTGGGCACGGCAAGCGATGATGAAGACGGAGGTGAAGGAGGGGGAGGAGAG TCGAGAGAATTGCAGTCGGTTGTCACGTGTCCTCGCTTTACATAA |
Transcript | >Hirsu2|2138 ATGGCTCTATCCCAACGTTCGTTCGCCTTCCTACTCTTGCGAGTCTTGGCCGTGACACTTGCCGAGCCGGTGCAG TACTGCCGCTTCGGTCACGGCCATGGCCAGATCGACTTCTGCGCGGCCATGGTCATGCACCAGAACCAGTCGACG TCGGCTCACGATCTGTACCTCAGCATGACGGTGACGCGGTCTTCGCCTCTGGGATGGACCGCCATCGGCACGGGG TCCGTCATGGCCGGCTCCCTCATGTTCATCGTTTACGGTGATGCCGAGTCGGGGCAGGGCCCCATCGTCAGCATC CGCACCGTCCCTGCCGGACACGCCCAGCCGAGGCCTGTCGACCAGGACGATACGGGCCCGTCGGATATCCGTGTC GTGCAGTCGACCTGGGCTGCCGCCGACGGTACTCACGATGACCCGACGTGGCAGGCGAACATTGCCGTGGTATGC TACGCCTGCACGCGGTTCCCCAGCGCCGCCCTGTCTGCGGCCGCGACGTCGGTGCCGTGGATCTGGGCCTGGAAT GACAAGCAGCGGCACAGCGTCTATTCGGTCGACGCCGAGCTCGATATGCACAAGCACCACGCCGGCAACGGCGGC TGGGGCAACTTCTACGTCGACATGGCTCGCTCCGTCAGCGAAGGCGAGCGGCCTCCGTCATGGCCTCGTGTGCGC CCGGGCATCGCCATGCTCGGAGCCTCGGACTGGCCAAGCGGCGTCGCGAGCTCGGCGTCGGCGCTCGATGGAAAT GGAAACCCCCTTGCCCGGCTGCACGGCCTCTTCATGGCCACGGCCTTCCTCTTCATCTTCCCGCTGGGCGTTGCG GCCATGCGGTCCGGGTCGGCGCAGTCGTTCAAGTACCACTGGGCTCTGCAGCTCATAGGCACCGCATTCGCCGAG GCCGGAGCCATCACGGGCATCTGCATGACGGGCGCCCGTGTTGCTTCCACGACCCGGACCCATGGGCCCCTGGGC GTCTCCGTGGCAGTGCTGCTCCTGGTCCAGGCGTTAGCGGGATGGAGGCATCACGTGGTTTTCGTGCGAATCCGG CGCCGAACTTGGATTTCTCATCTCCACATCTGGCTGGGCCGCGTCAGCCTCGTCGCTAGCTGGGTCAACCTCGTT TCTGGCCTGATTCTGGCCGGCGCAGGCCGCAGCCGAGTGGCCGCCATGGGCTGCTTCATCGTCCTGGACGCGCTC GGTCTGGCCATCTTTCTATGGCTCTCGAAGCGCAGCGCAAGGACAGGCTCAGCATCGGCAACTGCGGCGAGCAGG GACAACGTCGATAAGTATTTCGTCTTGGGCACGGCAAGCGATGATGAAGACGGAGGTGAAGGAGGGGGAGGAGAG TCGAGAGAATTGCAGTCGGTTGTCACGTGTCCTCGCTTTACATAA |
Gene | >Hirsu2|2138 ATGGCTCTATCCCAACGTTCGTTCGCCTTCCTACTCTTGCGAGTCTTGGCCGTGACACTTGCCGAGCCGGTGCAG TACTGCCGCTTCGGTCACGGCCATGGCCAGATCGACTTCTGCGCGGCCATGGTCATGCACCAGAACCAGTCGACG TCGGCTCACGATCTGTACCTCAGCATGACGGTGACGCGGTCTTCGCCTCTGGGATGGACCGCCATCGGCACGGGG TCCGTCATGGCCGGCTCCCTCATGTTCATCGTTTACGGTGATGCCGAGTCGGGGCAGGGCCCCATCGTCAGCATC CGCACCGTCCCTGCCGGACACGCCCAGCCGAGGCCTGTCGACCAGGACGATACGGGCCCGTCGGATATCCGTGTC GTGCAGTCGACCTGGGCTGCCGCCGACGGTACTCACGATGACCCGACGTGGCAGGCGAACATTGCCGTGGTATGC TACGCCTGCACGCGGTTCCCCAGCGCCGCCCTGTCTGCGGCCGCGACGTCGGTGCCGTGGATCTGGGCCTGGAAT GACAAGCAGCGGCACAGCGTCTATTCGGTCGACGCCGAGCTCGATATGCACAAGCACCACGCCGGCAACGGCGGC TGGGGCAACTTCTACGTCGACATGGCTCGCTCCGTCAGCGAAGGCGAGCGGCCTCCGTCATGGCCTCGTGTGCGC CCGGGCATCGCCATGCTCGGAGCCTCGGACTGGCCAAGCGGCGTCGCGAGCTCGGCGTCGGCGCTCGATGGAAAT GGAAACCCCCTTGCCCGGCTGCACGGCCTCTTCATGGCCACGGCCTTCCTCTTCATCTTCCCGCTGGGCGTTGCG GCCATGCGGTCCGGGTCGGCGCAGTCGTTCAAGTACCACTGGGCTCTGCAGCTCATAGGCACCGCATTCGCCGAG GCCGGAGCCATCACGGGCATCTGCATGACGGGCGCCCGTGTTGCTTCCACGACCCGGACCCATGGGCCCCTGGGC GTCTCCGTGGCAGTGCTGCTCCTGGTCCAGGCGTTAGCGGGATGGAGGCATCACGTGGTTTTCGTGCGAATCCGG CGCCGAACTTGGATTTCTCATCTCCACATCTGGCTGGGCCGCGTCAGCCTCGTCGCTAGCTGGGTCAACCTCGTT TCTGGCCTGATTCTGGCCGGCGCAGGCCGCAGCCGAGTGGCCGCCATGGGCTGCTTCATCGTCCTGGACGCGCTC GGTCTGGCCATCTTTCTATGGCTCTCGAAGCGCAGCGCAAGGACAGGCTCAGCATCGGCAACTGCGGCGAGCAGG GACAACGTCGATAAGTATTTCGTCTTGGGCACGGCAAGCGATGATGAAGACGGAGGTGAAGGAGGGGGAGGAGAG TCGAGAGAATTGCAGTCGGTTGTCACGTGTCCTCGCTTTACATAA |