Protein ID | Hirsu2|2137 |
Gene name | |
Location | Contig_15:16755..18517 |
Strand | - |
Gene length (bp) | 1762 |
Transcript length (bp) | 1608 |
Coding sequence length (bp) | 1608 |
Protein length (aa) | 536 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1232 | 0.0593 | 0.9519 | 0.096 | 0.082 | 0.0086 | 0.1303 | 0.2088 | 0.1046 | 0.0055 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 17 | 0.999424 |
Gene cluster ID | Type of secondary metabolism gene |
---|---|
Cluster 10 | (None) |
Orthofinder run ID | 4 |
Orthogroup | 98 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2137 MHRTVALALLSASSALAQSRSQPAPPAQQNGPSRNLEPPPPPQGAPSQDLGTSPAASSCESAGQADGQAGGSTCS EKALEFNIPDLRPESVCGHEATNRLYASYLYDGALSEIDPTNGTEIQKIKTPQEHKVSDNPDYHASGCDVLPDGR VCVSINDGEVFNSQGDESKAKVDDFIYCYDPKKGGKEVVDRINLTELDKDCPHSHQDITHTDKFAFAACTYPGSI VSFTHGLKDGKVVYSAKGRDGSTKEADGSSPVKEKDGSTKEADGSSPVKEKDRSTNEVDGTKPTENAGGLRSRAE AGSPNAGTLTKPGITAVKVGPDGRLIATDQSSRHGSFLISFETKQDGSLGEPQPIRIKDKNGQEVKTIGDNMDGL LIPPLFKGEIILTADGQNGTDVFECCSKDAWKECTHQKNIPNPELNNKGFTTGHFQFNDHIYTVIEFFVDDPKAG PKKEKFPTQDITCKIEKPTCDNEGAVRVKTGPVRNKPPVLESVGAKLALESVGAKLVLESVGAKLVLESVGAKLA LESVRIEHKK* |
Coding | >Hirsu2|2137 ATGCATCGCACTGTCGCGCTCGCGCTTCTGTCGGCCTCGTCCGCGCTGGCCCAATCCAGGTCTCAGCCTGCGCCG CCTGCACAGCAGAATGGGCCATCGCGGAACCTTGAGCCGCCGCCGCCGCCGCAGGGTGCGCCATCGCAGGACCTT GGAACGTCGCCGGCGGCTTCAAGCTGCGAAAGCGCCGGCCAGGCGGACGGACAGGCGGGCGGATCGACATGTAGC GAGAAGGCCCTGGAGTTCAACATCCCAGATCTACGCCCAGAATCTGTCTGTGGGCACGAAGCCACCAATAGGCTA TACGCCAGCTATCTTTACGACGGCGCACTCTCTGAGATTGACCCTACCAATGGCACGGAAATCCAGAAAATCAAA ACACCTCAAGAACATAAGGTGTCCGACAACCCGGACTACCACGCCAGCGGCTGTGACGTACTTCCTGACGGCAGG GTTTGTGTGTCGATCAACGACGGAGAAGTCTTCAACTCACAGGGCGATGAGTCCAAGGCAAAAGTCGATGACTTC ATTTACTGCTACGACCCAAAAAAGGGAGGAAAAGAGGTTGTGGACCGTATCAATCTGACCGAACTCGACAAAGAT TGCCCCCACAGTCACCAGGATATTACGCATACCGACAAATTCGCCTTCGCGGCCTGCACATACCCTGGAAGCATC GTCAGCTTCACTCACGGCCTCAAGGACGGCAAAGTAGTGTATTCGGCCAAGGGGAGAGATGGTTCCACAAAGGAG GCAGACGGTTCCAGCCCGGTCAAGGAGAAAGATGGTTCCACGAAGGAGGCAGACGGTTCCAGCCCGGTCAAGGAA AAAGATCGTTCCACAAATGAGGTAGACGGTACCAAGCCGACAGAGAACGCAGGCGGTCTCAGGTCGAGAGCGGAG GCGGGCAGCCCCAACGCGGGAACGTTGACGAAGCCGGGCATCACGGCGGTAAAAGTCGGTCCAGATGGTCGGCTC ATCGCCACAGACCAGTCCAGTCGTCACGGCAGCTTCTTGATTAGCTTTGAAACCAAGCAAGACGGCTCCCTGGGC GAGCCTCAGCCCATCCGCATCAAGGACAAGAACGGTCAAGAAGTCAAGACGATCGGCGATAACATGGACGGCCTG CTCATCCCTCCCTTGTTCAAGGGCGAAATCATTCTCACCGCGGACGGCCAAAATGGGACTGACGTGTTTGAGTGC TGCAGCAAGGACGCGTGGAAGGAGTGCACACACCAGAAAAACATACCAAATCCCGAGCTTAACAACAAGGGATTC ACGACAGGCCATTTTCAGTTCAACGACCATATCTACACTGTCATCGAGTTTTTCGTCGATGACCCCAAGGCCGGA CCCAAGAAGGAAAAGTTCCCCACGCAGGACATTACGTGCAAAATCGAAAAGCCGACGTGCGATAACGAGGGCGCT GTACGAGTGAAGACGGGGCCGGTCAGAAACAAACCCCCGGTGCTGGAGTCGGTGGGAGCCAAGCTGGCTCTGGAG TCGGTGGGAGCCAAGCTGGTTCTGGAGTCGGTGGGAGCCAAGCTGGTTCTGGAGTCGGTGGGAGCCAAGCTGGCT CTGGAGTCGGTGAGGATCGAACACAAAAAATGA |
Transcript | >Hirsu2|2137 ATGCATCGCACTGTCGCGCTCGCGCTTCTGTCGGCCTCGTCCGCGCTGGCCCAATCCAGGTCTCAGCCTGCGCCG CCTGCACAGCAGAATGGGCCATCGCGGAACCTTGAGCCGCCGCCGCCGCCGCAGGGTGCGCCATCGCAGGACCTT GGAACGTCGCCGGCGGCTTCAAGCTGCGAAAGCGCCGGCCAGGCGGACGGACAGGCGGGCGGATCGACATGTAGC GAGAAGGCCCTGGAGTTCAACATCCCAGATCTACGCCCAGAATCTGTCTGTGGGCACGAAGCCACCAATAGGCTA TACGCCAGCTATCTTTACGACGGCGCACTCTCTGAGATTGACCCTACCAATGGCACGGAAATCCAGAAAATCAAA ACACCTCAAGAACATAAGGTGTCCGACAACCCGGACTACCACGCCAGCGGCTGTGACGTACTTCCTGACGGCAGG GTTTGTGTGTCGATCAACGACGGAGAAGTCTTCAACTCACAGGGCGATGAGTCCAAGGCAAAAGTCGATGACTTC ATTTACTGCTACGACCCAAAAAAGGGAGGAAAAGAGGTTGTGGACCGTATCAATCTGACCGAACTCGACAAAGAT TGCCCCCACAGTCACCAGGATATTACGCATACCGACAAATTCGCCTTCGCGGCCTGCACATACCCTGGAAGCATC GTCAGCTTCACTCACGGCCTCAAGGACGGCAAAGTAGTGTATTCGGCCAAGGGGAGAGATGGTTCCACAAAGGAG GCAGACGGTTCCAGCCCGGTCAAGGAGAAAGATGGTTCCACGAAGGAGGCAGACGGTTCCAGCCCGGTCAAGGAA AAAGATCGTTCCACAAATGAGGTAGACGGTACCAAGCCGACAGAGAACGCAGGCGGTCTCAGGTCGAGAGCGGAG GCGGGCAGCCCCAACGCGGGAACGTTGACGAAGCCGGGCATCACGGCGGTAAAAGTCGGTCCAGATGGTCGGCTC ATCGCCACAGACCAGTCCAGTCGTCACGGCAGCTTCTTGATTAGCTTTGAAACCAAGCAAGACGGCTCCCTGGGC GAGCCTCAGCCCATCCGCATCAAGGACAAGAACGGTCAAGAAGTCAAGACGATCGGCGATAACATGGACGGCCTG CTCATCCCTCCCTTGTTCAAGGGCGAAATCATTCTCACCGCGGACGGCCAAAATGGGACTGACGTGTTTGAGTGC TGCAGCAAGGACGCGTGGAAGGAGTGCACACACCAGAAAAACATACCAAATCCCGAGCTTAACAACAAGGGATTC ACGACAGGCCATTTTCAGTTCAACGACCATATCTACACTGTCATCGAGTTTTTCGTCGATGACCCCAAGGCCGGA CCCAAGAAGGAAAAGTTCCCCACGCAGGACATTACGTGCAAAATCGAAAAGCCGACGTGCGATAACGAGGGCGCT GTACGAGTGAAGACGGGGCCGGTCAGAAACAAACCCCCGGTGCTGGAGTCGGTGGGAGCCAAGCTGGCTCTGGAG TCGGTGGGAGCCAAGCTGGTTCTGGAGTCGGTGGGAGCCAAGCTGGTTCTGGAGTCGGTGGGAGCCAAGCTGGCT CTGGAGTCGGTGAGGATCGAACACAAAAAATGA |
Gene | >Hirsu2|2137 ATGCATCGCACTGTCGCGCTCGCGCTTCTGTCGGCCTCGTCCGCGCTGGCCCAATCCAGGTCTCAGCCTGCGCCG CCTGCACAGCAGAATGGGCCATCGCGGAACCTTGAGCCGCCGCCGCCGCCGCAGGGTGCGCCATCGCAGGACCTT GGAACGTCGCCGGCGGCTTCAAGCTGCGAAAGCGCCGGCCAGGCGGACGGACAGGCGGGCGGATCGACATGTAGC GAGAAGGCCCTGGAGTTCAACATCCCAGATCTACGCCCAGAATCTGTCTGTGGGCACGAAGCCACCAATAGGCTA TACGCCAGGTAAGGCCAGACACATTGATCTTGCCTTCGAAACGTTTCTCGACCTTGGCTCCTGCTAACTCGCCGT CGCAGCTATCTTTACGACGGCGCACTCTCTGAGATTGACCCTACCAATGGCACGGAAATCCAGAAAATCAAAACA CCTCAAGAACATAAGGTGTCCGACAACCCGGACTACCACGCCAGCGGCTGTGACGTACTTCCTGACGGCAGGGTT TGTGTGTCGATCAACGACGGAGAAGTCTTCAACTCACAGGGCGATGAGTCCAAGGCAAAAGTCGATGACTTCATT TACTGCTACGACCCAAAAAAGGGAGGAAAAGAGGTTGTGGACCGTATCAATCTGACCGAACTCGACAAAGATTGC CCCCACAGTCACCAGGATATTACGCATACCGACAAATTCGCCTTCGCGGCCTGCACATACCCTGGAAGCATCGTC AGCTTCACTCACGGCCTCAAGGACGGCAAAGTAGTGTATTCGGCCAAGGGGAGAGATGGTTCCACAAAGGAGGCA GACGGTTCCAGCCCGGTCAAGGAGAAAGATGGTTCCACGAAGGAGGCAGACGGTTCCAGCCCGGTCAAGGAAAAA GATCGTTCCACAAATGAGGTAGACGGTACCAAGCCGACAGAGAACGCAGGCGGTCTCAGGTCGAGAGCGGAGGCG GGCAGCCCCAACGCGGGAACGTTGACGAAGCCGGGCATCACGGCGGTAAAAGTCGGTCCAGATGGTCGGCTCATC GCCACAGACCAGTCCAGTCGTCACGGCAGCTTCTTGATTAGCTTTGAAACCAAGCAAGACGGCTCCCTGGGCGAG CCTCAGCCCATCCGCATCAAGGACAAGAACGGTCAAGAAGTCAAGACGATCGGCGATAACATGGACGGCCTGCTC ATCCCTCCCTTGTTCAAGGGCGAAATCATTCTCACCGCGGACGGCCAAAATGGGACTGACGTGTTTGAGTGCTGC AGCAAGGACGCGTGGAAGGAGTGCACACACCAGAAAAACATACCAAATCCCGAGCTTAACAACAAGGGATTCACG ACAGGCCATTTTCAGTTCAACGACCATATCTACACTGTCATCGAGTTTTTCGTCGATGACCCCAAGGCCGGACCC AAGAAGGAAAAGTTCCCCACGCAGGACATTACGTGCAAAATCGAAAAGCCGACGTGCGATAACGAGGGCGGTAAG AGCGACAATTCGAGCAGTACCGGTGCGGATGCGGGTGCTCTGGGTGCGGGTGCTCTGGGTGCGGACGAGGGTGCC AGCTGTACGAGTGAAGACGGGGCCGGTCAGAAACAAACCCCCGGTGCTGGAGTCGGTGGGAGCCAAGCTGGCTCT GGAGTCGGTGGGAGCCAAGCTGGTTCTGGAGTCGGTGGGAGCCAAGCTGGTTCTGGAGTCGGTGGGAGCCAAGCT GGCTCTGGAGTCGGTGAGGATCGAACACAAAAAATGA |