Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2127
Gene name
LocationContig_1498:5299..6229
Strand-
Gene length (bp)930
Transcript length (bp)516
Coding sequence length (bp)516
Protein length (aa) 172

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.5373 0.438 0.179 0.1188 0.274 0.0698 0.0848 0.0737 0.0923 0.0134

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1962
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5513
Ophiocordyceps australis map64 (Brazil) OphauB2|2182
Ophiocordyceps camponoti-floridani Ophcf2|05532
Ophiocordyceps camponoti-rufipedis Ophun1|3777
Ophiocordyceps kimflemingae Ophio5|5389
Ophiocordyceps subramaniannii Hirsu2|2127 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2127
MRPFVVAVFDAIFDWRYILEWRSALSRDAKARISRRLLSAPDPESLRPDPAELARLLPSVVVQQQKILGQVPSDQ
TIEIIAWDIVEPYRSFAARMDAICFALRHSKQLVKSLLAAGDGWKLRIVNCPKREFRHTPRQQAKGNNRRVNAAK
ERQRQTMVQNQGIPPLAEHND*
Coding >Hirsu2|2127
ATGCGGCCGTTCGTCGTCGCCGTCTTCGACGCCATCTTCGACTGGCGCTACATCCTCGAATGGCGCAGCGCCCTC
TCGCGCGACGCCAAGGCCCGCATCTCGCGCCGCCTGCTCAGCGCGCCCGACCCGGAGAGCCTGCGGCCCGACCCG
GCCGAGCTGGCCCGGCTGCTGCCGTCCGTCGTCGTCCAGCAGCAGAAGATCCTGGGCCAGGTCCCGAGCGACCAG
ACGATCGAGATCATCGCGTGGGACATTGTGGAGCCCTACCGTTCCTTCGCCGCCCGCATGGATGCCATCTGCTTC
GCCCTCAGGCACTCGAAACAGCTCGTCAAGTCTCTCCTCGCCGCCGGCGACGGATGGAAGCTGAGGATCGTCAAC
TGCCCCAAGAGGGAGTTTCGACACACGCCTCGCCAACAGGCAAAGGGAAACAACCGACGCGTCAACGCGGCCAAG
GAGCGCCAGCGCCAGACCATGGTTCAGAACCAGGGCATCCCGCCTCTCGCCGAGCACAACGACTGA
Transcript >Hirsu2|2127
ATGCGGCCGTTCGTCGTCGCCGTCTTCGACGCCATCTTCGACTGGCGCTACATCCTCGAATGGCGCAGCGCCCTC
TCGCGCGACGCCAAGGCCCGCATCTCGCGCCGCCTGCTCAGCGCGCCCGACCCGGAGAGCCTGCGGCCCGACCCG
GCCGAGCTGGCCCGGCTGCTGCCGTCCGTCGTCGTCCAGCAGCAGAAGATCCTGGGCCAGGTCCCGAGCGACCAG
ACGATCGAGATCATCGCGTGGGACATTGTGGAGCCCTACCGTTCCTTCGCCGCCCGCATGGATGCCATCTGCTTC
GCCCTCAGGCACTCGAAACAGCTCGTCAAGTCTCTCCTCGCCGCCGGCGACGGATGGAAGCTGAGGATCGTCAAC
TGCCCCAAGAGGGAGTTTCGACACACGCCTCGCCAACAGGCAAAGGGAAACAACCGACGCGTCAACGCGGCCAAG
GAGCGCCAGCGCCAGACCATGGTTCAGAACCAGGGCATCCCGCCTCTCGCCGAGCACAACGACTGA
Gene >Hirsu2|2127
ATGCGGCCGTTCGTCGTCGCCGTCTTCGACGCCATCTTCGACTGGCGCTACATCCTCGAATGGCGCAGCGCCCTC
TCGCGCGACGCCAAGGCCCGCATCTCGCGCCGCCTGCTCAGCGCGCCCGACCCGGAGAGCCTGCGGCCCGACCCG
GCCGAGCTGGCCCGGCTGCTGCCGTCCGTCGTCGTCCAGCAGCAGAAGATCCTGGGCCAGGTCCCGAGCGACCAG
ACGATCGAGATCATCGCGTGGGACATTGTGGTACGTACGCTCGGGGACACGACCGACGAGGAGAAATAGGCGAAA
GAAAAGGCTGACGATGCCTGGCAAACCCAGCAGTGCGCCGTGAGCTCGCAGCAGGGCATCACGCAGCTCCCATGC
TGGTGCGAGGCCGACGGGGGTTAGGAGCCCTACCGTTCCTTCGCCGCCCGCATGGATGCCATCTGCTTCGCCCTC
AGGGTGAGTCACGCCCTGCCACTGGAAACACAAGTCGAGAAGCAGTGAGGAAAAGAAAGAAAGACAAGTGAAGAA
GCGGCGGAGGGGGGGGGAAGGGGTCCACGTATACGACGCTGATCCGTTCTCTCGCCTCCCCCGTCATCCAGCACT
CGAAACAGCTCGTCAAGTCTCTCCTCGCCGCCGGCGACGGATGGAAGCTGAGGATCGTCAACTGCCCCAAGAGGG
AGTTTCGAGTAAGCCTCGTCTCTTCCATCGCCAACAAATCACATCCCCCTTTTTATCCTGACACCTCCATCGCCC
ATCAACCCCTTTTCAGGGGTGGAATGGTCTACCCTTTTCAGGGATTCACTCTGCTCACAGCACACGCCTCGCCAA
CAGGCAAAGGGAAACAACCGACGCGTCAACGCGGCCAAGGAGCGCCAGCGCCAGACCATGGTTCAGAACCAGGGC
ATCCCGCCTCTCGCCGAGCACAACGACTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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