Protein ID | Hirsu2|2122 |
Gene name | |
Location | Contig_1495:5151..6039 |
Strand | - |
Gene length (bp) | 888 |
Transcript length (bp) | 816 |
Coding sequence length (bp) | 816 |
Protein length (aa) | 272 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm|Nucleus | Nuclear localization signal | 0.5028 | 0.8452 | 0.0175 | 0.0137 | 0.3051 | 0.0011 | 0.0593 | 0.1927 | 0.0696 | 0.0009 |
Orthofinder run ID | 4 |
Orthogroup | 481 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2122 MSVPASKDNLARIRDNQRRSRARRREYLQELEQRLRVYELQGVEASTEVQMAARRVADENRQLRDLLNRHGVSDD HIAHYLQSGTLLPLDSAHAQPFRAGAPAAAVQSLQHLLVPRPLAGLDQTMSFPLPSPSSRETSTTSGSTTSSTVW ESPQPTMPSFGHHHQHQHHHQHHHQHQQQQQHMTVAHATVMASPVHSAYPPTTFAGSATAARPDSVFVGQPSPSM LSDPCQPMATTQAAPIGGRPAMHMHYPLPTYQDPTGQPYGPAGTGC* |
Coding | >Hirsu2|2122 ATGTCAGTCCCCGCATCCAAAGACAACTTGGCCCGCATCCGAGACAACCAGAGGCGATCGCGCGCCCGACGGAGA GAGTACCTTCAGGAGCTTGAGCAGCGGCTGCGCGTTTACGAGCTCCAGGGCGTCGAGGCCTCGACCGAGGTCCAG ATGGCCGCCAGGCGCGTCGCCGACGAGAACCGCCAGCTGCGCGACCTGCTCAACCGCCACGGCGTCAGCGACGAC CACATCGCCCACTACCTGCAGTCGGGCACCCTGCTGCCGCTCGATTCCGCCCACGCCCAGCCCTTCCGCGCCGGC GCCCCGGCCGCCGCCGTCCAGTCGCTGCAGCATCTCCTCGTCCCGCGCCCGCTCGCCGGCCTCGACCAGACCATG TCCTTCCCGCTGCCGAGCCCCTCGAGCCGGGAGACGTCGACGACGAGCGGATCGACGACGAGCTCGACCGTCTGG GAGTCCCCGCAGCCGACGATGCCCTCCTTCGGCCACCACCACCAACACCAACACCACCACCAACACCATCACCAA CACCAGCAGCAGCAGCAGCACATGACCGTCGCCCACGCCACCGTCATGGCCTCGCCCGTCCATTCCGCCTACCCG CCCACCACCTTTGCCGGCAGCGCCACAGCCGCCCGCCCAGACTCCGTCTTCGTTGGCCAGCCGTCGCCCTCGATG CTCAGCGACCCGTGCCAGCCCATGGCCACGACGCAGGCCGCGCCCATCGGCGGCCGACCGGCCATGCACATGCAC TACCCCCTGCCGACCTATCAAGACCCTACCGGCCAACCGTACGGCCCTGCGGGAACCGGCTGCTGA |
Transcript | >Hirsu2|2122 ATGTCAGTCCCCGCATCCAAAGACAACTTGGCCCGCATCCGAGACAACCAGAGGCGATCGCGCGCCCGACGGAGA GAGTACCTTCAGGAGCTTGAGCAGCGGCTGCGCGTTTACGAGCTCCAGGGCGTCGAGGCCTCGACCGAGGTCCAG ATGGCCGCCAGGCGCGTCGCCGACGAGAACCGCCAGCTGCGCGACCTGCTCAACCGCCACGGCGTCAGCGACGAC CACATCGCCCACTACCTGCAGTCGGGCACCCTGCTGCCGCTCGATTCCGCCCACGCCCAGCCCTTCCGCGCCGGC GCCCCGGCCGCCGCCGTCCAGTCGCTGCAGCATCTCCTCGTCCCGCGCCCGCTCGCCGGCCTCGACCAGACCATG TCCTTCCCGCTGCCGAGCCCCTCGAGCCGGGAGACGTCGACGACGAGCGGATCGACGACGAGCTCGACCGTCTGG GAGTCCCCGCAGCCGACGATGCCCTCCTTCGGCCACCACCACCAACACCAACACCACCACCAACACCATCACCAA CACCAGCAGCAGCAGCAGCACATGACCGTCGCCCACGCCACCGTCATGGCCTCGCCCGTCCATTCCGCCTACCCG CCCACCACCTTTGCCGGCAGCGCCACAGCCGCCCGCCCAGACTCCGTCTTCGTTGGCCAGCCGTCGCCCTCGATG CTCAGCGACCCGTGCCAGCCCATGGCCACGACGCAGGCCGCGCCCATCGGCGGCCGACCGGCCATGCACATGCAC TACCCCCTGCCGACCTATCAAGACCCTACCGGCCAACCGTACGGCCCTGCGGGAACCGGCTGCTGA |
Gene | >Hirsu2|2122 ATGTCAGTCCCCGCAGTGAGTGACCAGAGCCCGCCCGCCAGACAGAGGCCCCGTTCGCCTGACGTGAGAAACCTT GACGTGGCCCAGTCCAAAGACAACTTGGCCCGCATCCGAGACAACCAGAGGCGATCGCGCGCCCGACGGAGAGAG TACCTTCAGGAGCTTGAGCAGCGGCTGCGCGTTTACGAGCTCCAGGGCGTCGAGGCCTCGACCGAGGTCCAGATG GCCGCCAGGCGCGTCGCCGACGAGAACCGCCAGCTGCGCGACCTGCTCAACCGCCACGGCGTCAGCGACGACCAC ATCGCCCACTACCTGCAGTCGGGCACCCTGCTGCCGCTCGATTCCGCCCACGCCCAGCCCTTCCGCGCCGGCGCC CCGGCCGCCGCCGTCCAGTCGCTGCAGCATCTCCTCGTCCCGCGCCCGCTCGCCGGCCTCGACCAGACCATGTCC TTCCCGCTGCCGAGCCCCTCGAGCCGGGAGACGTCGACGACGAGCGGATCGACGACGAGCTCGACCGTCTGGGAG TCCCCGCAGCCGACGATGCCCTCCTTCGGCCACCACCACCAACACCAACACCACCACCAACACCATCACCAACAC CAGCAGCAGCAGCAGCACATGACCGTCGCCCACGCCACCGTCATGGCCTCGCCCGTCCATTCCGCCTACCCGCCC ACCACCTTTGCCGGCAGCGCCACAGCCGCCCGCCCAGACTCCGTCTTCGTTGGCCAGCCGTCGCCCTCGATGCTC AGCGACCCGTGCCAGCCCATGGCCACGACGCAGGCCGCGCCCATCGGCGGCCGACCGGCCATGCACATGCACTAC CCCCTGCCGACCTATCAAGACCCTACCGGCCAACCGTACGGCCCTGCGGGAACCGGCTGCTGA |