© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2121 |
| Gene name | |
| Location | Contig_1495:1692..3251 |
| Strand | - |
| Gene length (bp) | 1559 |
| Transcript length (bp) | 1482 |
| Coding sequence length (bp) | 1482 |
| Protein length (aa) | 494 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | Nuclear localization signal | 0.2201 | 0.8241 | 0.5026 | 0.1199 | 0.0459 | 0.1061 | 0.017 | 0.0061 | 0.0448 | 0.0006 |
| Orthofinder run ID | 4 |
| Orthogroup | 8990 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|2121 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2121 LRTRRPTKKAADAAAGRDPGGGAAEPTAQPAKRRKAQAEVRSAAAAAAPRPKPAKRPRAGASAGSAGAAASRAAS RAESRAAEEAAPAAKKRKAAAASGPAKRQRKTGGASEDTKDTKDTKEDTKDTKGNAAQATKKQKAPASDPASSAP AKRWRQLETPADTGGVAAAPAAKKRKAASSVPAKRRRQTEAASEDTKDKAAPSGPAKRQRKTEAPFEDTKVKAAP ASRKRKAASASRTRSIGTSRAGTSSTSGVGNSVVGGARIISASSAVSTSSVGNSVVNGTSVVNGTGTDNSTSAVS TRSVGNSVVNSTSVINSTSAVSTSSVGNSAVDGTSVINGTSVVSTSRVGNSVVGARVVGASSVGNSVVNSQGIVS ASRVDTRIVGASSVDTKIFNGTSVVNGTIFVNSTSFVDSTSFVDGTSRVGPGSVDNSVHTSSFDTNSFDTNSFDT SSSRDGARGNFAEASRAPQTPGVWQRKPASPSRVAPPECQLRT* |
| Coding | >Hirsu2|2121 CTGAGGACGCGGAGGCCGACCAAGAAGGCCGCGGATGCAGCCGCCGGACGCGACCCTGGCGGCGGCGCAGCGGAA CCCACTGCACAGCCAGCGAAGCGTCGCAAGGCCCAGGCCGAGGTCCGCAGTGCAGCGGCGGCGGCGGCGCCGAGG CCGAAGCCGGCCAAGCGCCCGAGGGCCGGCGCGTCTGCGGGCTCGGCCGGCGCAGCAGCATCGCGAGCAGCATCG CGAGCAGAATCGCGAGCGGCAGAAGAGGCGGCGCCGGCAGCCAAGAAGCGGAAAGCGGCCGCCGCGTCAGGTCCG GCCAAGCGCCAGCGAAAGACCGGGGGGGCGTCTGAGGACACCAAGGACACCAAGGACACTAAGGAGGACACCAAG GACACCAAGGGCAATGCGGCGCAGGCGACCAAGAAGCAAAAGGCGCCCGCGTCAGATCCGGCCTCGTCAGCCCCA GCCAAGCGGTGGCGACAGCTCGAGACGCCTGCGGACACCGGAGGTGTAGCAGCAGCGCCGGCAGCCAAGAAGCGA AAGGCGGCCTCATCAGTCCCAGCCAAGCGCCGGCGACAGACCGAGGCGGCGTCTGAGGATACCAAGGACAAGGCG GCCCCGTCCGGTCCGGCCAAGCGCCAGCGAAAGACAGAGGCCCCGTTTGAGGACACCAAGGTCAAGGCGGCGCCG GCATCCAGGAAGCGAAAGGCGGCCTCTGCCAGTCGCACGCGCAGCATCGGCACCAGCCGTGCCGGCACCAGTAGC ACGAGCGGCGTCGGCAACAGCGTCGTCGGCGGCGCCAGAATCATCAGCGCCAGCAGCGCCGTCAGCACCAGCAGC GTCGGCAACAGCGTCGTCAACGGTACCAGCGTCGTCAACGGGACCGGCACCGACAACAGCACCAGCGCCGTCAGC ACCAGAAGCGTCGGCAACAGCGTCGTCAACAGCACCAGCGTCATCAACAGCACCAGCGCCGTCAGCACCAGCAGC GTCGGCAACAGCGCCGTCGACGGCACCAGCGTCATCAACGGCACAAGCGTTGTCAGCACCAGCCGTGTCGGCAAC AGCGTCGTCGGTGCCAGAGTTGTCGGCGCCAGCAGTGTCGGCAACAGTGTCGTCAACAGTCAAGGAATCGTCAGC GCCAGTAGAGTGGACACCAGAATCGTTGGCGCCAGCAGCGTCGATACCAAAATCTTCAACGGCACCAGCGTCGTC AACGGCACCATCTTCGTCAACAGCACCAGCTTCGTCGACAGCACCAGCTTCGTCGACGGCACCAGCCGTGTCGGC CCCGGCAGCGTCGATAACAGCGTCCACACCAGCAGCTTCGACACCAACAGCTTCGACACCAACAGCTTCGACACC AGCAGCAGCCGGGACGGCGCACGGGGCAATTTCGCCGAGGCCAGCCGAGCCCCTCAGACTCCAGGCGTCTGGCAG CGAAAACCTGCGAGTCCTTCCAGAGTTGCGCCCCCGGAATGTCAGCTCCGCACCTAG |
| Transcript | >Hirsu2|2121 CTGAGGACGCGGAGGCCGACCAAGAAGGCCGCGGATGCAGCCGCCGGACGCGACCCTGGCGGCGGCGCAGCGGAA CCCACTGCACAGCCAGCGAAGCGTCGCAAGGCCCAGGCCGAGGTCCGCAGTGCAGCGGCGGCGGCGGCGCCGAGG CCGAAGCCGGCCAAGCGCCCGAGGGCCGGCGCGTCTGCGGGCTCGGCCGGCGCAGCAGCATCGCGAGCAGCATCG CGAGCAGAATCGCGAGCGGCAGAAGAGGCGGCGCCGGCAGCCAAGAAGCGGAAAGCGGCCGCCGCGTCAGGTCCG GCCAAGCGCCAGCGAAAGACCGGGGGGGCGTCTGAGGACACCAAGGACACCAAGGACACTAAGGAGGACACCAAG GACACCAAGGGCAATGCGGCGCAGGCGACCAAGAAGCAAAAGGCGCCCGCGTCAGATCCGGCCTCGTCAGCCCCA GCCAAGCGGTGGCGACAGCTCGAGACGCCTGCGGACACCGGAGGTGTAGCAGCAGCGCCGGCAGCCAAGAAGCGA AAGGCGGCCTCATCAGTCCCAGCCAAGCGCCGGCGACAGACCGAGGCGGCGTCTGAGGATACCAAGGACAAGGCG GCCCCGTCCGGTCCGGCCAAGCGCCAGCGAAAGACAGAGGCCCCGTTTGAGGACACCAAGGTCAAGGCGGCGCCG GCATCCAGGAAGCGAAAGGCGGCCTCTGCCAGTCGCACGCGCAGCATCGGCACCAGCCGTGCCGGCACCAGTAGC ACGAGCGGCGTCGGCAACAGCGTCGTCGGCGGCGCCAGAATCATCAGCGCCAGCAGCGCCGTCAGCACCAGCAGC GTCGGCAACAGCGTCGTCAACGGTACCAGCGTCGTCAACGGGACCGGCACCGACAACAGCACCAGCGCCGTCAGC ACCAGAAGCGTCGGCAACAGCGTCGTCAACAGCACCAGCGTCATCAACAGCACCAGCGCCGTCAGCACCAGCAGC GTCGGCAACAGCGCCGTCGACGGCACCAGCGTCATCAACGGCACAAGCGTTGTCAGCACCAGCCGTGTCGGCAAC AGCGTCGTCGGTGCCAGAGTTGTCGGCGCCAGCAGTGTCGGCAACAGTGTCGTCAACAGTCAAGGAATCGTCAGC GCCAGTAGAGTGGACACCAGAATCGTTGGCGCCAGCAGCGTCGATACCAAAATCTTCAACGGCACCAGCGTCGTC AACGGCACCATCTTCGTCAACAGCACCAGCTTCGTCGACAGCACCAGCTTCGTCGACGGCACCAGCCGTGTCGGC CCCGGCAGCGTCGATAACAGCGTCCACACCAGCAGCTTCGACACCAACAGCTTCGACACCAACAGCTTCGACACC AGCAGCAGCCGGGACGGCGCACGGGGCAATTTCGCCGAGGCCAGCCGAGCCCCTCAGACTCCAGGCGTCTGGCAG CGAAAACCTGCGAGTCCTTCCAGAGTTGCGCCCCCGGAATGTCAGCTCCGCACCTAG |
| Gene | >Hirsu2|2121 CTGAGGACGCGGAGGCCGACCAAGAAGGCCGCGGATGCAGCCGCCGGACGCGACCCTGGCGGCGGCGCAGCGGAA CCCACTGCACAGCCAGCGAAGCGTCGCAAGGCCCAGGCCGAGGTCCGCAGTGCAGCGGCGGCGGCGGCGCCGAGG CCGAAGCCGGCCAAGCGCCCGAGGGCCGGCGCGTCTGCGGGCTCGGCCGGCGCAGCAGCATCGCGAGCAGCATCG CGAGCAGAATCGCGAGCGGCAGAAGAGGCGGCGCCGGCAGCCAAGAAGCGGAAAGCGGCCGCCGCGTCAGGTCCG GCCAAGCGCCAGCGAAAGACCGGGGGGGCGTCTGAGGACACCAAGGACACCAAGGACACTAAGGAGGACACCAAG GACACCAAGGGCAATGCGGCGCAGGCGACCAAGAAGCAAAAGGCGCCCGCGTCAGATCCGGCCTCGTCAGCCCCA GCCAAGCGGTGGCGACAGCTCGAGACGCCTGCGGACACCGGAGGTGTAGCAGCAGCGCCGGCAGCCAAGAAGCGA AAGGCGGCCTCATCAGTCCCAGCCAAGCGCCGGCGACAGACCGAGGCGGCGTCTGAGGATACCAAGGACAAGGCG GCCCCGTCCGGTCCGGCCAAGCGCCAGCGAAAGACAGAGGCCCCGTTTGAGGACACCAAGGTCAAGGCGGCGCCG GCATCCAGGAAGCGAAAGGCGGCCTCGTCCGTCCCGGCCTCGTCAGCTCCAGCCAAGCGCCGACGACGGGCCGAG GCGTCTGACGACGCCGACGCCGTAGCAGTGCCAGTCGCACGCGCAGCATCGGCACCAGCCGTGCCGGCACCAGTA GCACGAGCGGCGTCGGCAACAGCGTCGTCGGCGGCGCCAGAATCATCAGCGCCAGCAGCGCCGTCAGCACCAGCA GCGTCGGCAACAGCGTCGTCAACGGTACCAGCGTCGTCAACGGGACCGGCACCGACAACAGCACCAGCGCCGTCA GCACCAGAAGCGTCGGCAACAGCGTCGTCAACAGCACCAGCGTCATCAACAGCACCAGCGCCGTCAGCACCAGCA GCGTCGGCAACAGCGCCGTCGACGGCACCAGCGTCATCAACGGCACAAGCGTTGTCAGCACCAGCCGTGTCGGCA ACAGCGTCGTCGGTGCCAGAGTTGTCGGCGCCAGCAGTGTCGGCAACAGTGTCGTCAACAGTCAAGGAATCGTCA GCGCCAGTAGAGTGGACACCAGAATCGTTGGCGCCAGCAGCGTCGATACCAAAATCTTCAACGGCACCAGCGTCG TCAACGGCACCATCTTCGTCAACAGCACCAGCTTCGTCGACAGCACCAGCTTCGTCGACGGCACCAGCCGTGTCG GCCCCGGCAGCGTCGATAACAGCGTCCACACCAGCAGCTTCGACACCAACAGCTTCGACACCAACAGCTTCGACA CCAGCAGCAGCCGGGACGGCGCACGGGGCAATTTCGCCGAGGCCAGCCGAGCCCCTCAGACTCCAGGCGTCTGGC AGCGAAAACCTGCGAGTCCTTCCAGAGTTGCGCCCCCGGAATGTCAGCTCCGCACCTAG |