© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2116 |
| Gene name | |
| Location | Contig_1493:4605..5049 |
| Strand | + |
| Gene length (bp) | 444 |
| Transcript length (bp) | 444 |
| Coding sequence length (bp) | 444 |
| Protein length (aa) | 148 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF09962 | DUF2196 | Uncharacterized conserved protein (DUF2196) | 1.3E-21 | 25 | 79 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P39588|YWBE_BACSU | Uncharacterized protein YwbE OS=Bacillus subtilis (strain 168) GN=ywbE PE=4 SV=1 | 27 | 83 | 2.0E-12 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | Nuclear localization signal | 0.6759 | 0.5901 | 0.099 | 0.0703 | 0.1671 | 0.0504 | 0.0713 | 0.0436 | 0.0662 | 0.0118 |
| Orthofinder run ID | 4 |
| Orthogroup | 7515 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|2116 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2116 MNRRRGSNRPPPPPPQAQAGGVPAAAAVTPGARVAIVLKADQASGRETAGTVAAVLTRGEHPRGVKVRLGDGRVG RVRRLLPTTTTTTTTTAARSVAVDCRLEPEEPPPRTLADFFVPAAVARCPVCEAFEGDEAAVTLHVEREHFS* |
| Coding | >Hirsu2|2116 ATGAACAGGCGGCGCGGCAGCAACCGTCCGCCTCCTCCTCCTCCACAGGCGCAGGCGGGCGGCGTCCCGGCGGCG GCAGCAGTAACGCCAGGCGCGCGCGTGGCCATCGTCCTCAAGGCGGACCAGGCGTCCGGGCGCGAGACGGCCGGC ACAGTGGCAGCGGTGCTGACGCGCGGCGAGCACCCGCGCGGCGTCAAGGTGCGGCTGGGCGACGGGCGCGTCGGG CGCGTGCGGCGCCTGCTACCGACGACGACGACGACGACGACGACGACCGCCGCGCGGAGCGTTGCCGTCGACTGC AGGCTGGAGCCGGAGGAGCCGCCGCCGAGGACGCTGGCTGACTTCTTCGTGCCCGCTGCCGTGGCCAGGTGTCCG GTCTGCGAGGCCTTTGAGGGCGACGAGGCGGCCGTTACGCTCCACGTCGAGCGCGAGCACTTCTCCTGA |
| Transcript | >Hirsu2|2116 ATGAACAGGCGGCGCGGCAGCAACCGTCCGCCTCCTCCTCCTCCACAGGCGCAGGCGGGCGGCGTCCCGGCGGCG GCAGCAGTAACGCCAGGCGCGCGCGTGGCCATCGTCCTCAAGGCGGACCAGGCGTCCGGGCGCGAGACGGCCGGC ACAGTGGCAGCGGTGCTGACGCGCGGCGAGCACCCGCGCGGCGTCAAGGTGCGGCTGGGCGACGGGCGCGTCGGG CGCGTGCGGCGCCTGCTACCGACGACGACGACGACGACGACGACGACCGCCGCGCGGAGCGTTGCCGTCGACTGC AGGCTGGAGCCGGAGGAGCCGCCGCCGAGGACGCTGGCTGACTTCTTCGTGCCCGCTGCCGTGGCCAGGTGTCCG GTCTGCGAGGCCTTTGAGGGCGACGAGGCGGCCGTTACGCTCCACGTCGAGCGCGAGCACTTCTCCTGA |
| Gene | >Hirsu2|2116 ATGAACAGGCGGCGCGGCAGCAACCGTCCGCCTCCTCCTCCTCCACAGGCGCAGGCGGGCGGCGTCCCGGCGGCG GCAGCAGTAACGCCAGGCGCGCGCGTGGCCATCGTCCTCAAGGCGGACCAGGCGTCCGGGCGCGAGACGGCCGGC ACAGTGGCAGCGGTGCTGACGCGCGGCGAGCACCCGCGCGGCGTCAAGGTGCGGCTGGGCGACGGGCGCGTCGGG CGCGTGCGGCGCCTGCTACCGACGACGACGACGACGACGACGACGACCGCCGCGCGGAGCGTTGCCGTCGACTGC AGGCTGGAGCCGGAGGAGCCGCCGCCGAGGACGCTGGCTGACTTCTTCGTGCCCGCTGCCGTGGCCAGGTGTCCG GTCTGCGAGGCCTTTGAGGGCGACGAGGCGGCCGTTACGCTCCACGTCGAGCGCGAGCACTTCTCCTGA |