Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2111
Gene name
LocationContig_1492:721..1309
Strand-
Gene length (bp)588
Transcript length (bp)588
Coding sequence length (bp)588
Protein length (aa) 196

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus|Mitochondrion Mitochondrial transit peptide 0.655 0.6197 0.0726 0.1483 0.8474 0.0005 0.223 0.2984 0.1006 0.0264

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1957
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2825
Ophiocordyceps australis map64 (Brazil) OphauB2|3972
Ophiocordyceps camponoti-floridani Ophcf2|00272
Ophiocordyceps camponoti-rufipedis Ophun1|5403
Ophiocordyceps kimflemingae Ophio5|7995
Ophiocordyceps subramaniannii Hirsu2|2111 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2111
MSADTTPIPPARFAAALKALSPGTLHLKVLEIRNSIAHLQYSNDQLRPFAEAATPDPDCVDAIRENEAVIERMAE
RIALVRLEAEARGMSWREFRGADEEESGADEAHVAVADRQQQQQQQQQQQHAAWSDGTFQTGTIRNGQVRLDDDA
AAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGDGSGGMHL*
Coding >Hirsu2|2111
ATGTCCGCCGACACAACCCCCATCCCGCCCGCGCGCTTCGCCGCCGCGCTCAAGGCGCTGTCGCCGGGCACGCTG
CACCTCAAGGTGCTCGAGATCCGCAACTCCATCGCCCACCTGCAGTACTCCAACGACCAGCTGCGGCCGTTCGCC
GAGGCGGCCACGCCGGACCCGGACTGCGTCGACGCCATCCGCGAGAACGAGGCCGTCATCGAGCGCATGGCCGAG
CGCATCGCTCTGGTCCGCCTCGAGGCCGAGGCCCGCGGCATGAGCTGGCGCGAGTTCCGGGGCGCCGACGAGGAG
GAGAGCGGCGCCGACGAGGCCCATGTCGCCGTTGCCGACCGACAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAG
CACGCGGCCTGGTCGGACGGCACCTTTCAGACGGGCACGATCCGCAACGGCCAGGTCCGCCTTGACGACGACGCC
GCCGCCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGATGGCGGCGACGGCAGCGGCGGCATGCATCTTTGA
Transcript >Hirsu2|2111
ATGTCCGCCGACACAACCCCCATCCCGCCCGCGCGCTTCGCCGCCGCGCTCAAGGCGCTGTCGCCGGGCACGCTG
CACCTCAAGGTGCTCGAGATCCGCAACTCCATCGCCCACCTGCAGTACTCCAACGACCAGCTGCGGCCGTTCGCC
GAGGCGGCCACGCCGGACCCGGACTGCGTCGACGCCATCCGCGAGAACGAGGCCGTCATCGAGCGCATGGCCGAG
CGCATCGCTCTGGTCCGCCTCGAGGCCGAGGCCCGCGGCATGAGCTGGCGCGAGTTCCGGGGCGCCGACGAGGAG
GAGAGCGGCGCCGACGAGGCCCATGTCGCCGTTGCCGACCGACAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAG
CACGCGGCCTGGTCGGACGGCACCTTTCAGACGGGCACGATCCGCAACGGCCAGGTCCGCCTTGACGACGACGCC
GCCGCCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGATGGCGGCGACGGCAGCGGCGGCATGCATCTTTGA
Gene >Hirsu2|2111
ATGTCCGCCGACACAACCCCCATCCCGCCCGCGCGCTTCGCCGCCGCGCTCAAGGCGCTGTCGCCGGGCACGCTG
CACCTCAAGGTGCTCGAGATCCGCAACTCCATCGCCCACCTGCAGTACTCCAACGACCAGCTGCGGCCGTTCGCC
GAGGCGGCCACGCCGGACCCGGACTGCGTCGACGCCATCCGCGAGAACGAGGCCGTCATCGAGCGCATGGCCGAG
CGCATCGCTCTGGTCCGCCTCGAGGCCGAGGCCCGCGGCATGAGCTGGCGCGAGTTCCGGGGCGCCGACGAGGAG
GAGAGCGGCGCCGACGAGGCCCATGTCGCCGTTGCCGACCGACAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAG
CACGCGGCCTGGTCGGACGGCACCTTTCAGACGGGCACGATCCGCAACGGCCAGGTCCGCCTTGACGACGACGCC
GCCGCCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGATGGCGGCGACGGCAGCGGCGGCATGCATCTTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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