Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2110
Gene name
LocationContig_1491:5517..6049
Strand+
Gene length (bp)532
Transcript length (bp)486
Coding sequence length (bp)486
Protein length (aa) 162

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08288 PIGA PIGA (GPI anchor biosynthesis) 5.5E-48 45 134
PF13439 Glyco_transf_4 Glycosyltransferase Family 4 3.5E-23 20 160
PF13579 Glyco_trans_4_4 Glycosyl transferase 4-like domain 6.2E-11 20 158
PF13477 Glyco_trans_4_2 Glycosyl transferase 4-like 1.2E-06 24 157

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P32363|GPI3_YEAST Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPT14 PE=1 SV=4 6 161 4.0E-76
sp|B5VSZ6|GPI3_YEAS6 Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain AWRI1631) GN=SPT14 PE=3 SV=2 6 161 4.0E-76
sp|B3LKQ3|GPI3_YEAS1 Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain RM11-1a) GN=SPT14 PE=3 SV=1 6 161 4.0E-76
sp|A6ZW78|GPI3_YEAS7 Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain YJM789) GN=SPT14 PE=3 SV=1 6 161 5.0E-76
sp|P87172|GPI3_SCHPO Phosphatidylinositol N-acetylglucosaminyltransferase gpi3 subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi3 PE=3 SV=1 10 161 1.0E-74
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P32363|GPI3_YEAST Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPT14 PE=1 SV=4 6 161 4.0E-76
sp|B5VSZ6|GPI3_YEAS6 Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain AWRI1631) GN=SPT14 PE=3 SV=2 6 161 4.0E-76
sp|B3LKQ3|GPI3_YEAS1 Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain RM11-1a) GN=SPT14 PE=3 SV=1 6 161 4.0E-76
sp|A6ZW78|GPI3_YEAS7 Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain YJM789) GN=SPT14 PE=3 SV=1 6 161 5.0E-76
sp|P87172|GPI3_SCHPO Phosphatidylinositol N-acetylglucosaminyltransferase gpi3 subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi3 PE=3 SV=1 10 161 1.0E-74
sp|P37287|PIGA_HUMAN Phosphatidylinositol N-acetylglucosaminyltransferase subunit A OS=Homo sapiens GN=PIGA PE=1 SV=1 4 160 3.0E-65
sp|Q64323|PIGA_MOUSE N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein OS=Mus musculus GN=Piga PE=2 SV=1 5 160 5.0E-65
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GO

GO Term Description Terminal node
GO:0006506 GPI anchor biosynthetic process Yes
GO:0006505 GPI anchor metabolic process No
GO:0043412 macromolecule modification No
GO:0008152 metabolic process No
GO:0009987 cellular process No
GO:1901137 carbohydrate derivative biosynthetic process No
GO:0019637 organophosphate metabolic process No
GO:0006664 glycolipid metabolic process No
GO:0006643 membrane lipid metabolic process No
GO:0006629 lipid metabolic process No
GO:1901135 carbohydrate derivative metabolic process No
GO:0071704 organic substance metabolic process No
GO:0006661 phosphatidylinositol biosynthetic process No
GO:0006793 phosphorus metabolic process No
GO:0019538 protein metabolic process No
GO:0006644 phospholipid metabolic process No
GO:0044249 cellular biosynthetic process No
GO:0009058 biosynthetic process No
GO:0046467 membrane lipid biosynthetic process No
GO:0008150 biological_process No
GO:0090407 organophosphate biosynthetic process No
GO:0046474 glycerophospholipid biosynthetic process No
GO:0046486 glycerolipid metabolic process No
GO:0008654 phospholipid biosynthetic process No
GO:1903509 liposaccharide metabolic process No
GO:0043170 macromolecule metabolic process No
GO:0036211 protein modification process No
GO:0044237 cellular metabolic process No
GO:1901576 organic substance biosynthetic process No
GO:0006796 phosphate-containing compound metabolic process No
GO:0046488 phosphatidylinositol metabolic process No
GO:1901564 organonitrogen compound metabolic process No
GO:0009247 glycolipid biosynthetic process No
GO:0006650 glycerophospholipid metabolic process No
GO:0044238 primary metabolic process No
GO:0008610 lipid biosynthetic process No
GO:0045017 glycerolipid biosynthetic process No
GO:0044255 cellular lipid metabolic process No
GO:0006497 protein lipidation No
GO:0006807 nitrogen compound metabolic process No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.3677 0.523 0.054 0.3028 0.3448 0.1168 0.3716 0.1742 0.1834 0.0021

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup8986
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|2110 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2110
MARRTYNIAMVSDFFFPQPGGVESHIYQLSSKLIDRGHKVIIITHAHDDRKGVRYLTNGLKVYHVPFFVIYRHTT
FPTVFSFFPILRNICIRERIEIVHGHGSLSSLCHEGILHARTMGLRTVFTDHSLFGFADAASILTNKLLKFTLSD
VDHSICVSHTC*
Coding >Hirsu2|2110
ATGGCGCGGCGGACGTACAACATCGCCATGGTCAGCGACTTCTTCTTCCCGCAGCCCGGGGGCGTCGAGTCGCAC
ATCTACCAGCTGTCGAGCAAGCTGATCGACCGCGGGCACAAGGTCATCATCATCACGCACGCGCACGACGACCGC
AAGGGCGTGCGGTACCTGACCAACGGGCTCAAGGTCTACCACGTCCCCTTCTTCGTCATCTACCGGCACACGACC
TTCCCCACCGTCTTCTCCTTCTTCCCCATCCTGCGCAACATCTGCATCCGCGAGCGGATCGAGATCGTCCACGGC
CACGGCAGCCTGAGCAGCCTGTGCCACGAGGGCATCCTGCACGCCCGCACCATGGGCCTGCGCACCGTCTTCACC
GACCACTCGCTCTTCGGCTTCGCCGACGCCGCCAGCATCCTGACCAACAAGCTGCTCAAGTTCACCCTGAGCGAC
GTCGACCACAGCATCTGCGTCAGCCACACGTGCTGA
Transcript >Hirsu2|2110
ATGGCGCGGCGGACGTACAACATCGCCATGGTCAGCGACTTCTTCTTCCCGCAGCCCGGGGGCGTCGAGTCGCAC
ATCTACCAGCTGTCGAGCAAGCTGATCGACCGCGGGCACAAGGTCATCATCATCACGCACGCGCACGACGACCGC
AAGGGCGTGCGGTACCTGACCAACGGGCTCAAGGTCTACCACGTCCCCTTCTTCGTCATCTACCGGCACACGACC
TTCCCCACCGTCTTCTCCTTCTTCCCCATCCTGCGCAACATCTGCATCCGCGAGCGGATCGAGATCGTCCACGGC
CACGGCAGCCTGAGCAGCCTGTGCCACGAGGGCATCCTGCACGCCCGCACCATGGGCCTGCGCACCGTCTTCACC
GACCACTCGCTCTTCGGCTTCGCCGACGCCGCCAGCATCCTGACCAACAAGCTGCTCAAGTTCACCCTGAGCGAC
GTCGACCACAGCATCTGCGTCAGCCACACGTGCTGA
Gene >Hirsu2|2110
ATGGCGCGGCGGACGTACAACATCGCCATGGTCAGCGACTTCTTCTTCCCGCAGCCCGGGGGCGTCGAGTCGCAC
ATCTACCAGCTGTCGAGCAAGCTGATCGACCGCGGGCACAAGGTCATCATCATCACGCACGCGCACGACGACCGC
AAGGGCGTGCGGTACCTGACCAACGGGCTCAAGGTCTACCACGTCCCCTTCTTCGTCATCTACCGGCACACGACC
TTCCCCACCGTCTTCTCCTTCTTCCCCATCCTGCGCAACATCTGCATCCGCGAGCGGATCGAGATCGTCCACGGC
CACGGCAGCCTGAGCAGCCTGTGCCACGAGGGCATCCTGCACGCCCGCACCATGGGCCTGCGCACCGTCTTCACC
GACCACTCGCTCTTCGGCTTCGCCGACGCCGCCAGCATCCTGACCAACAAGCTGCTCAAGTTCACCCTGAGCGAC
GTCGACCACAGCATCTGCGTCAGCCACACGTGGTCAGTCGACGACTCCTCTCCTCCCTCCCCGCCCCGGCTTGGC
CAGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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