© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2110 |
| Gene name | |
| Location | Contig_1491:5517..6049 |
| Strand | + |
| Gene length (bp) | 532 |
| Transcript length (bp) | 486 |
| Coding sequence length (bp) | 486 |
| Protein length (aa) | 162 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08288 | PIGA | PIGA (GPI anchor biosynthesis) | 5.5E-48 | 45 | 134 |
| PF13439 | Glyco_transf_4 | Glycosyltransferase Family 4 | 3.5E-23 | 20 | 160 |
| PF13579 | Glyco_trans_4_4 | Glycosyl transferase 4-like domain | 6.2E-11 | 20 | 158 |
| PF13477 | Glyco_trans_4_2 | Glycosyl transferase 4-like | 1.2E-06 | 24 | 157 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P32363|GPI3_YEAST | Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPT14 PE=1 SV=4 | 6 | 161 | 4.0E-76 |
| sp|B5VSZ6|GPI3_YEAS6 | Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain AWRI1631) GN=SPT14 PE=3 SV=2 | 6 | 161 | 4.0E-76 |
| sp|B3LKQ3|GPI3_YEAS1 | Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain RM11-1a) GN=SPT14 PE=3 SV=1 | 6 | 161 | 4.0E-76 |
| sp|A6ZW78|GPI3_YEAS7 | Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain YJM789) GN=SPT14 PE=3 SV=1 | 6 | 161 | 5.0E-76 |
| sp|P87172|GPI3_SCHPO | Phosphatidylinositol N-acetylglucosaminyltransferase gpi3 subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi3 PE=3 SV=1 | 10 | 161 | 1.0E-74 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P32363|GPI3_YEAST | Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPT14 PE=1 SV=4 | 6 | 161 | 4.0E-76 |
| sp|B5VSZ6|GPI3_YEAS6 | Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain AWRI1631) GN=SPT14 PE=3 SV=2 | 6 | 161 | 4.0E-76 |
| sp|B3LKQ3|GPI3_YEAS1 | Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain RM11-1a) GN=SPT14 PE=3 SV=1 | 6 | 161 | 4.0E-76 |
| sp|A6ZW78|GPI3_YEAS7 | Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain YJM789) GN=SPT14 PE=3 SV=1 | 6 | 161 | 5.0E-76 |
| sp|P87172|GPI3_SCHPO | Phosphatidylinositol N-acetylglucosaminyltransferase gpi3 subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi3 PE=3 SV=1 | 10 | 161 | 1.0E-74 |
| sp|P37287|PIGA_HUMAN | Phosphatidylinositol N-acetylglucosaminyltransferase subunit A OS=Homo sapiens GN=PIGA PE=1 SV=1 | 4 | 160 | 3.0E-65 |
| sp|Q64323|PIGA_MOUSE | N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein OS=Mus musculus GN=Piga PE=2 SV=1 | 5 | 160 | 5.0E-65 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006506 | GPI anchor biosynthetic process | Yes |
| GO:0006505 | GPI anchor metabolic process | No |
| GO:0043412 | macromolecule modification | No |
| GO:0008152 | metabolic process | No |
| GO:0009987 | cellular process | No |
| GO:1901137 | carbohydrate derivative biosynthetic process | No |
| GO:0019637 | organophosphate metabolic process | No |
| GO:0006664 | glycolipid metabolic process | No |
| GO:0006643 | membrane lipid metabolic process | No |
| GO:0006629 | lipid metabolic process | No |
| GO:1901135 | carbohydrate derivative metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0006661 | phosphatidylinositol biosynthetic process | No |
| GO:0006793 | phosphorus metabolic process | No |
| GO:0019538 | protein metabolic process | No |
| GO:0006644 | phospholipid metabolic process | No |
| GO:0044249 | cellular biosynthetic process | No |
| GO:0009058 | biosynthetic process | No |
| GO:0046467 | membrane lipid biosynthetic process | No |
| GO:0008150 | biological_process | No |
| GO:0090407 | organophosphate biosynthetic process | No |
| GO:0046474 | glycerophospholipid biosynthetic process | No |
| GO:0046486 | glycerolipid metabolic process | No |
| GO:0008654 | phospholipid biosynthetic process | No |
| GO:1903509 | liposaccharide metabolic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0036211 | protein modification process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0006796 | phosphate-containing compound metabolic process | No |
| GO:0046488 | phosphatidylinositol metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0009247 | glycolipid biosynthetic process | No |
| GO:0006650 | glycerophospholipid metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0008610 | lipid biosynthetic process | No |
| GO:0045017 | glycerolipid biosynthetic process | No |
| GO:0044255 | cellular lipid metabolic process | No |
| GO:0006497 | protein lipidation | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 25 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2110 MARRTYNIAMVSDFFFPQPGGVESHIYQLSSKLIDRGHKVIIITHAHDDRKGVRYLTNGLKVYHVPFFVIYRHTT FPTVFSFFPILRNICIRERIEIVHGHGSLSSLCHEGILHARTMGLRTVFTDHSLFGFADAASILTNKLLKFTLSD VDHSICVSHTC* |
| Coding | >Hirsu2|2110 ATGGCGCGGCGGACGTACAACATCGCCATGGTCAGCGACTTCTTCTTCCCGCAGCCCGGGGGCGTCGAGTCGCAC ATCTACCAGCTGTCGAGCAAGCTGATCGACCGCGGGCACAAGGTCATCATCATCACGCACGCGCACGACGACCGC AAGGGCGTGCGGTACCTGACCAACGGGCTCAAGGTCTACCACGTCCCCTTCTTCGTCATCTACCGGCACACGACC TTCCCCACCGTCTTCTCCTTCTTCCCCATCCTGCGCAACATCTGCATCCGCGAGCGGATCGAGATCGTCCACGGC CACGGCAGCCTGAGCAGCCTGTGCCACGAGGGCATCCTGCACGCCCGCACCATGGGCCTGCGCACCGTCTTCACC GACCACTCGCTCTTCGGCTTCGCCGACGCCGCCAGCATCCTGACCAACAAGCTGCTCAAGTTCACCCTGAGCGAC GTCGACCACAGCATCTGCGTCAGCCACACGTGCTGA |
| Transcript | >Hirsu2|2110 ATGGCGCGGCGGACGTACAACATCGCCATGGTCAGCGACTTCTTCTTCCCGCAGCCCGGGGGCGTCGAGTCGCAC ATCTACCAGCTGTCGAGCAAGCTGATCGACCGCGGGCACAAGGTCATCATCATCACGCACGCGCACGACGACCGC AAGGGCGTGCGGTACCTGACCAACGGGCTCAAGGTCTACCACGTCCCCTTCTTCGTCATCTACCGGCACACGACC TTCCCCACCGTCTTCTCCTTCTTCCCCATCCTGCGCAACATCTGCATCCGCGAGCGGATCGAGATCGTCCACGGC CACGGCAGCCTGAGCAGCCTGTGCCACGAGGGCATCCTGCACGCCCGCACCATGGGCCTGCGCACCGTCTTCACC GACCACTCGCTCTTCGGCTTCGCCGACGCCGCCAGCATCCTGACCAACAAGCTGCTCAAGTTCACCCTGAGCGAC GTCGACCACAGCATCTGCGTCAGCCACACGTGCTGA |
| Gene | >Hirsu2|2110 ATGGCGCGGCGGACGTACAACATCGCCATGGTCAGCGACTTCTTCTTCCCGCAGCCCGGGGGCGTCGAGTCGCAC ATCTACCAGCTGTCGAGCAAGCTGATCGACCGCGGGCACAAGGTCATCATCATCACGCACGCGCACGACGACCGC AAGGGCGTGCGGTACCTGACCAACGGGCTCAAGGTCTACCACGTCCCCTTCTTCGTCATCTACCGGCACACGACC TTCCCCACCGTCTTCTCCTTCTTCCCCATCCTGCGCAACATCTGCATCCGCGAGCGGATCGAGATCGTCCACGGC CACGGCAGCCTGAGCAGCCTGTGCCACGAGGGCATCCTGCACGCCCGCACCATGGGCCTGCGCACCGTCTTCACC GACCACTCGCTCTTCGGCTTCGCCGACGCCGCCAGCATCCTGACCAACAAGCTGCTCAAGTTCACCCTGAGCGAC GTCGACCACAGCATCTGCGTCAGCCACACGTGGTCAGTCGACGACTCCTCTCCTCCCTCCCCGCCCCGGCTTGGC CAGCTGA |