Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|211
Gene name
LocationContig_1037:2377..3461
Strand+
Gene length (bp)1084
Transcript length (bp)714
Coding sequence length (bp)714
Protein length (aa) 238

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00515 TPR_1 Tetratricopeptide repeat 5.8E-09 37 67
PF07719 TPR_2 Tetratricopeptide repeat 7.9E-07 37 66
PF13181 TPR_8 Tetratricopeptide repeat 2.6E-06 37 67
PF13174 TPR_6 Tetratricopeptide repeat 3.2E-02 39 64
PF13424 TPR_12 Tetratricopeptide repeat 7.0E-08 35 97
PF13176 TPR_7 Tetratricopeptide repeat 1.3E-06 39 68

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O77775|NCF2_BOVIN Neutrophil cytosol factor 2 OS=Bos taurus GN=NCF2 PE=2 SV=1 1 222 2.0E-39
sp|P19878|NCF2_HUMAN Neutrophil cytosol factor 2 OS=Homo sapiens GN=NCF2 PE=1 SV=2 1 222 2.0E-37
sp|O70145|NCF2_MOUSE Neutrophil cytosol factor 2 OS=Mus musculus GN=Ncf2 PE=1 SV=1 1 222 6.0E-36
sp|Q86UR1|NOXA1_HUMAN NADPH oxidase activator 1 OS=Homo sapiens GN=NOXA1 PE=1 SV=1 2 223 1.0E-27
sp|A7E3N7|NOXA1_RAT NADPH oxidase activator 1 OS=Rattus norvegicus GN=Noxa1 PE=2 SV=1 2 223 3.0E-27
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Swissprot ID Swissprot Description Start End E-value
sp|O77775|NCF2_BOVIN Neutrophil cytosol factor 2 OS=Bos taurus GN=NCF2 PE=2 SV=1 1 222 2.0E-39
sp|P19878|NCF2_HUMAN Neutrophil cytosol factor 2 OS=Homo sapiens GN=NCF2 PE=1 SV=2 1 222 2.0E-37
sp|O70145|NCF2_MOUSE Neutrophil cytosol factor 2 OS=Mus musculus GN=Ncf2 PE=1 SV=1 1 222 6.0E-36
sp|Q86UR1|NOXA1_HUMAN NADPH oxidase activator 1 OS=Homo sapiens GN=NOXA1 PE=1 SV=1 2 223 1.0E-27
sp|A7E3N7|NOXA1_RAT NADPH oxidase activator 1 OS=Rattus norvegicus GN=Noxa1 PE=2 SV=1 2 223 3.0E-27
sp|Q8CJ00|NOXA1_MOUSE NADPH oxidase activator 1 OS=Mus musculus GN=Noxa1 PE=1 SV=1 2 210 1.0E-25
sp|Q867T7|NCFA_DICDI NADPH oxidase activator OS=Dictyostelium discoideum GN=ncfA PE=2 SV=1 3 129 1.0E-19
sp|A7E3N2|NCF2_RAT Neutrophil cytosol factor 2 OS=Rattus norvegicus GN=Ncf2 PE=2 SV=1 1 222 1.0E-13
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GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm Nuclear localization signal|Nuclear export signal 0.8537 0.4071 0.0594 0.2597 0.2264 0.0189 0.3266 0.1452 0.1754 0.0969

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4972
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4506
Ophiocordyceps australis map64 (Brazil) OphauB2|3358
Ophiocordyceps camponoti-floridani Ophcf2|01753
Ophiocordyceps camponoti-rufipedis Ophun1|2220
Ophiocordyceps kimflemingae Ophio5|4954
Ophiocordyceps subramaniannii Hirsu2|211 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|211
MSLKQEIETWVAALGRYDNNEFDDALGEFDKICDTSKILFNMGVIHATLGEHEKAVECYQRAIRLDQYLAVAYFQ
QGVSNFLLGDFEEALANFNDTLLYLRGNTMIDYAQLGLLFKLYSCEVLFNRGLCYIYLQQREAGMQDLSYAVKEK
VVEDHNVIDEAIAEEAEGYTVFSIPVGVVYRPNEAKVRNLKTKDYLGKARLVAASDKSNAFTGFAGSEIKNAGKT
EVKDDRPLGGNK*
Coding >Hirsu2|211
ATGTCTCTGAAGCAGGAGATCGAGACTTGGGTCGCGGCTCTGGGTCGCTACGACAACAATGAGTTCGACGACGCG
CTCGGCGAGTTCGACAAGATTTGTGATACCAGCAAGATTCTATTTAATATGGGCGTCATCCACGCCACTCTCGGC
GAGCACGAGAAGGCAGTGGAATGTTACCAGCGAGCTATTCGTCTCGATCAATACCTCGCCGTTGCATACTTCCAG
CAAGGCGTCTCAAATTTTCTCCTCGGCGACTTTGAAGAGGCCCTAGCCAACTTCAACGACACCCTCCTCTATCTG
CGTGGCAACACCATGATCGACTACGCCCAGCTTGGACTGCTCTTCAAGCTTTACTCGTGCGAGGTTCTTTTTAAT
CGCGGGTTGTGTTACATCTATCTGCAACAACGGGAAGCTGGCATGCAGGATTTATCCTACGCCGTCAAGGAGAAG
GTGGTGGAAGATCACAACGTCATCGACGAAGCCATTGCCGAAGAGGCTGAGGGCTATACTGTCTTCTCGATTCCT
GTCGGTGTCGTTTACAGGCCGAACGAGGCCAAAGTGCGCAATCTGAAGACGAAGGATTACCTGGGCAAGGCAAGA
TTGGTTGCCGCTTCGGACAAGTCGAATGCTTTCACTGGATTCGCCGGATCTGAAATCAAGAATGCTGGGAAGACG
GAAGTCAAGGACGACCGGCCTCTCGGCGGCAACAAATGA
Transcript >Hirsu2|211
ATGTCTCTGAAGCAGGAGATCGAGACTTGGGTCGCGGCTCTGGGTCGCTACGACAACAATGAGTTCGACGACGCG
CTCGGCGAGTTCGACAAGATTTGTGATACCAGCAAGATTCTATTTAATATGGGCGTCATCCACGCCACTCTCGGC
GAGCACGAGAAGGCAGTGGAATGTTACCAGCGAGCTATTCGTCTCGATCAATACCTCGCCGTTGCATACTTCCAG
CAAGGCGTCTCAAATTTTCTCCTCGGCGACTTTGAAGAGGCCCTAGCCAACTTCAACGACACCCTCCTCTATCTG
CGTGGCAACACCATGATCGACTACGCCCAGCTTGGACTGCTCTTCAAGCTTTACTCGTGCGAGGTTCTTTTTAAT
CGCGGGTTGTGTTACATCTATCTGCAACAACGGGAAGCTGGCATGCAGGATTTATCCTACGCCGTCAAGGAGAAG
GTGGTGGAAGATCACAACGTCATCGACGAAGCCATTGCCGAAGAGGCTGAGGGCTATACTGTCTTCTCGATTCCT
GTCGGTGTCGTTTACAGGCCGAACGAGGCCAAAGTGCGCAATCTGAAGACGAAGGATTACCTGGGCAAGGCAAGA
TTGGTTGCCGCTTCGGACAAGTCGAATGCTTTCACTGGATTCGCCGGATCTGAAATCAAGAATGCTGGGAAGACG
GAAGTCAAGGACGACCGGCCTCTCGGCGGCAACAAATGA
Gene >Hirsu2|211
ATGTCTCTGAAGCAGGTAAGTGCCATCCTGTCGCATCACTTTGCGCAGCAATTGACCGGTCTGAACTTGCAGGAG
ATCGAGACTTGGGTCGCGGCTCTGGGTCGCTACGACAACAATGAGTTCGACGACGCGCTCGGCGAGTTCGACAAG
ATTTGTGATACCAGCAAGATTCTATTTAATATGGGCGTCATCCACGCCACTCTCGGCGAGCACGAGAAGGCAGTG
AGTGCAGCACTGACCAGAATCCATGTCGGACCGGGCGCGATGGAGGATGGCCGAGACTTAGGTCGCTAATCCCTC
ACAGGTGGAATGTTACCAGCGAGCTATTCGTCTCGATCAATACCTCGCCGTTGCATACTTCCAGCAAGGCGTCTC
AAATTTTCTCCTCGGCGACTTTGAAGAGGCCCTAGCCAACTTCAACGACACCCTCCTCTATCTGCGTGGCAACAC
CATGATCGACTACGCCCAGCTTGGACTGCTCTTCAAGCTTTACTCGTGCGAGGTTCTTTTTAATCGCGGGTTGTG
TTACATCTATCTGCAACAACGGGAAGCTGGCATGCAGGATTTATCCTACGCCGTCAAGGAGAAGGTGGTGGAAGA
TCACAACGTCATCGACGAAGCCATTGCCGAAGAGGCTGAGGTAAGTAGCCACTCGTCGCCGAATGCGCCACTGAG
CCGACTTACAATAGTACCATAGGGCTATACTGTCTTCTCGATTCCTGTCGGTGTCGTTTACAGGCCGAACGAGGC
CAAAGTGCGCAATCTGAAGACGAAGGATTACCTGGGCAAGGCAAGATTGGTTGCCGCTTCGGACAAGTCGAATGC
TTTCACTGGATTCGCCGGATCTGAAATCAAGAATGTAAGCTCCGCCACACGCCCGCACTACTCCCGCTCTGCGGC
TGAACTGGCCTCGACTAAAATTTTTGCAGGCTGGGAAGACGGAAGTCAAGGACGACCGGCCGTCCGACAACATTT
CCTTCGCCGCGACAAATCTTGTCAAGCCCGGAATACAGTCTCGGCGGCAACAGTCTGAGCCTCCCACGACCCGCA
ATGTCTTCCCCCCGACGCCCCCTCCTGAGAATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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