Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2107
Gene name
LocationContig_1491:8..644
Strand+
Gene length (bp)636
Transcript length (bp)531
Coding sequence length (bp)531
Protein length (aa) 177

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Lysosome/Vacuole|Golgi apparatus Signal peptide|Transmembrane domain 0.219 0.0929 0.3379 0.2248 0.1715 0.0053 0.2364 0.8259 0.6866 0.0155

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 5 27 22
2 92 114 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup402
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3686
Ophiocordyceps australis 1348a (Ghana) OphauG2|7988
Ophiocordyceps australis map64 (Brazil) OphauB2|7691
Ophiocordyceps camponoti-floridani Ophcf2|03074
Ophiocordyceps camponoti-floridani Ophcf2|04988
Ophiocordyceps camponoti-rufipedis Ophun1|4207
Ophiocordyceps kimflemingae Ophio5|2418
Ophiocordyceps kimflemingae Ophio5|4200
Ophiocordyceps subramaniannii Hirsu2|2107 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2107
LQAVLAAVLATLLLRGLVPSPVLDFLLDARWDALFEARDAARIALVQDTFACCGLDALDDRAYPFDAADTPCAAL
YRRHRPCKGPWMSAMQATSALDFAVVLTVGLMQILGLLLMRDRTGWWTALRTQGWKQAELGDDGSSQHLLPDPDN
DDDGYGAVPHLKPAPAAAPERHADNR*
Coding >Hirsu2|2107
CTGCAGGCCGTGCTGGCCGCCGTGCTGGCGACGCTGCTGCTGCGCGGCCTCGTGCCCTCGCCCGTCCTCGACTTC
CTGCTCGACGCCCGCTGGGACGCCCTGTTCGAGGCCCGCGACGCCGCCCGCATCGCCCTCGTCCAGGACACCTTC
GCCTGCTGCGGCCTCGACGCCCTCGACGACCGCGCCTACCCCTTCGACGCCGCCGACACGCCCTGCGCCGCCCTC
TACCGCCGCCACCGCCCCTGCAAGGGCCCCTGGATGAGCGCCATGCAGGCCACCTCGGCCCTCGACTTTGCCGTC
GTCCTTACCGTCGGCCTCATGCAGATCCTCGGCCTCCTCCTGATGAGGGACCGGACGGGCTGGTGGACCGCCCTG
CGGACCCAGGGCTGGAAGCAGGCCGAGCTCGGCGACGACGGCAGCAGCCAGCACCTGCTGCCGGACCCCGACAAC
GACGACGACGGCTACGGCGCCGTGCCACACCTCAAGCCCGCCCCGGCCGCAGCCCCGGAGCGACACGCCGACAAT
CGTTGA
Transcript >Hirsu2|2107
CTGCAGGCCGTGCTGGCCGCCGTGCTGGCGACGCTGCTGCTGCGCGGCCTCGTGCCCTCGCCCGTCCTCGACTTC
CTGCTCGACGCCCGCTGGGACGCCCTGTTCGAGGCCCGCGACGCCGCCCGCATCGCCCTCGTCCAGGACACCTTC
GCCTGCTGCGGCCTCGACGCCCTCGACGACCGCGCCTACCCCTTCGACGCCGCCGACACGCCCTGCGCCGCCCTC
TACCGCCGCCACCGCCCCTGCAAGGGCCCCTGGATGAGCGCCATGCAGGCCACCTCGGCCCTCGACTTTGCCGTC
GTCCTTACCGTCGGCCTCATGCAGATCCTCGGCCTCCTCCTGATGAGGGACCGGACGGGCTGGTGGACCGCCCTG
CGGACCCAGGGCTGGAAGCAGGCCGAGCTCGGCGACGACGGCAGCAGCCAGCACCTGCTGCCGGACCCCGACAAC
GACGACGACGGCTACGGCGCCGTGCCACACCTCAAGCCCGCCCCGGCCGCAGCCCCGGAGCGACACGCCGACAAT
CGTTGA
Gene >Hirsu2|2107
CTGCAGGCCGTGCTGGCCGCCGTGCTGGCGACGCTGCTGCTGCGCGGCCTCGTGCCCTCGCCCGTCCTCGACTTC
CTGCTCGACGCCCGCTGGGACGCCCTGTTCGAGGCCCGCGACGCCGCCCGCATCGCCCTCGTCCAGGACACCTTC
GCCTGCTGCGGCCTCGACGCCCTCGACGACCGCGCCTACCCCTTCGACGCCGCCGACACGCCCTGCGCCGCCCTC
TACCGCCGCCACCGCCCCTGCAAGGGCCCCTGGATGAGCGCCATGCAGGCCACCTCGGCCCTCGACTTTGCCGTC
GTCCTTACCGTCGGCCTCATGCAGGTCAGTTTTTTTTTTTTTTGTTTTTTTTTAAACCCATCCCGAGCCTCGCCG
CCCTCTTCACCCTCCGGAGAACCGGCCATCAAGTCTGACCGCGAGCCGGCCCAGATCCTCGGCCTCCTCCTGATG
AGGGACCGGACGGGCTGGTGGACCGCCCTGCGGACCCAGGGCTGGAAGCAGGCCGAGCTCGGCGACGACGGCAGC
AGCCAGCACCTGCTGCCGGACCCCGACAACGACGACGACGGCTACGGCGCCGTGCCACACCTCAAGCCCGCCCCG
GCCGCAGCCCCGGAGCGACACGCCGACAATCGTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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