Protein ID | Hirsu2|2104 |
Gene name | |
Location | Contig_149:32194..34083 |
Strand | + |
Gene length (bp) | 1889 |
Transcript length (bp) | 1830 |
Coding sequence length (bp) | 1830 |
Protein length (aa) | 610 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00136 | DNA_pol_B | DNA polymerase family B | 1.4E-88 | 246 | 604 |
PF03104 | DNA_pol_B_exo1 | DNA polymerase family B, exonuclease domain | 1.9E-13 | 3 | 178 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P14284|DPOZ_YEAST | DNA polymerase zeta catalytic subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=REV3 PE=1 SV=1 | 1 | 604 | 0.0E+00 |
sp|Q9P6L6|DPOZ_SCHPO | DNA polymerase zeta catalytic subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rev3 PE=3 SV=1 | 1 | 604 | 0.0E+00 |
sp|Q61493|DPOLZ_MOUSE | DNA polymerase zeta catalytic subunit OS=Mus musculus GN=Rev3l PE=1 SV=3 | 1 | 604 | 0.0E+00 |
sp|O60673|DPOLZ_HUMAN | DNA polymerase zeta catalytic subunit OS=Homo sapiens GN=REV3L PE=1 SV=2 | 1 | 604 | 0.0E+00 |
sp|Q766Z3|REV3_ARATH | DNA polymerase zeta catalytic subunit OS=Arabidopsis thaliana GN=REV3 PE=2 SV=1 | 1 | 604 | 6.0E-172 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P14284|DPOZ_YEAST | DNA polymerase zeta catalytic subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=REV3 PE=1 SV=1 | 1 | 604 | 0.0E+00 |
sp|Q9P6L6|DPOZ_SCHPO | DNA polymerase zeta catalytic subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rev3 PE=3 SV=1 | 1 | 604 | 0.0E+00 |
sp|Q61493|DPOLZ_MOUSE | DNA polymerase zeta catalytic subunit OS=Mus musculus GN=Rev3l PE=1 SV=3 | 1 | 604 | 0.0E+00 |
sp|O60673|DPOLZ_HUMAN | DNA polymerase zeta catalytic subunit OS=Homo sapiens GN=REV3L PE=1 SV=2 | 1 | 604 | 0.0E+00 |
sp|Q766Z3|REV3_ARATH | DNA polymerase zeta catalytic subunit OS=Arabidopsis thaliana GN=REV3 PE=2 SV=1 | 1 | 604 | 6.0E-172 |
sp|P46588|DPOD_CANAX | DNA polymerase delta catalytic subunit OS=Candida albicans GN=POL3 PE=3 SV=2 | 68 | 603 | 2.0E-70 |
sp|P30316|DPOD_SCHPO | DNA polymerase delta catalytic subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pol3 PE=1 SV=2 | 1 | 603 | 9.0E-68 |
sp|P28339|DPOD1_BOVIN | DNA polymerase delta catalytic subunit OS=Bos taurus GN=POLD1 PE=1 SV=1 | 76 | 604 | 3.0E-65 |
sp|P28340|DPOD1_HUMAN | DNA polymerase delta catalytic subunit OS=Homo sapiens GN=POLD1 PE=1 SV=2 | 62 | 604 | 4.0E-65 |
sp|Q54N97|DPOD1_DICDI | DNA polymerase delta catalytic subunit OS=Dictyostelium discoideum GN=pold1 PE=3 SV=1 | 1 | 597 | 1.0E-64 |
sp|P54358|DPOD1_DROME | DNA polymerase delta catalytic subunit OS=Drosophila melanogaster GN=DNApol-delta PE=2 SV=2 | 68 | 604 | 9.0E-64 |
sp|Q9LRE6|DPOD1_ORYSJ | DNA polymerase delta catalytic subunit OS=Oryza sativa subsp. japonica GN=POLD1 PE=2 SV=1 | 69 | 597 | 9.0E-64 |
sp|P30315|DPOD1_PLAFK | DNA polymerase delta catalytic subunit OS=Plasmodium falciparum (isolate K1 / Thailand) GN=POLD1 PE=3 SV=1 | 85 | 597 | 1.0E-61 |
sp|O54747|DPOD1_RAT | DNA polymerase delta catalytic subunit OS=Rattus norvegicus GN=Pold1 PE=2 SV=1 | 76 | 604 | 3.0E-61 |
sp|P52431|DPOD1_MOUSE | DNA polymerase delta catalytic subunit OS=Mus musculus GN=Pold1 PE=1 SV=2 | 76 | 604 | 1.0E-60 |
sp|Q9LVN7|DPOD1_ARATH | DNA polymerase delta catalytic subunit OS=Arabidopsis thaliana GN=POLD1 PE=2 SV=2 | 69 | 553 | 1.0E-59 |
sp|P90829|DPOD1_CAEEL | DNA polymerase delta catalytic subunit OS=Caenorhabditis elegans GN=F10C2.4 PE=3 SV=1 | 68 | 604 | 1.0E-59 |
sp|P97283|DPOD1_MESAU | DNA polymerase delta catalytic subunit OS=Mesocricetus auratus GN=POLD1 PE=2 SV=1 | 76 | 604 | 3.0E-59 |
sp|O48901|DPOD1_SOYBN | DNA polymerase delta catalytic subunit OS=Glycine max GN=POLD1 PE=2 SV=1 | 69 | 597 | 3.0E-59 |
sp|P24907|DPOL_SHV21 | DNA polymerase catalytic subunit OS=Saimiriine herpesvirus 2 (strain 11) GN=9 PE=3 SV=1 | 21 | 575 | 8.0E-57 |
sp|Q3KSP1|DPOL_EBVG | DNA polymerase catalytic subunit OS=Epstein-Barr virus (strain GD1) GN=BALF5 PE=3 SV=1 | 69 | 579 | 7.0E-56 |
sp|Q1HVC1|DPOL_EBVA8 | DNA polymerase catalytic subunit OS=Epstein-Barr virus (strain AG876) GN=BALF5 PE=3 SV=1 | 69 | 579 | 8.0E-56 |
sp|P03198|DPOL_EBVB9 | DNA polymerase catalytic subunit OS=Epstein-Barr virus (strain B95-8) GN=BALF5 PE=1 SV=1 | 69 | 579 | 2.0E-55 |
sp|Q2HRD0|DPOL_HHV8P | DNA polymerase catalytic subunit OS=Human herpesvirus 8 type P (isolate GK18) GN=ORF9 PE=3 SV=1 | 69 | 585 | 6.0E-55 |
sp|P15436|DPOD_YEAST | DNA polymerase delta catalytic subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=POL3 PE=1 SV=4 | 66 | 603 | 5.0E-53 |
sp|P52367|DPOL_EHV2 | DNA polymerase catalytic subunit OS=Equine herpesvirus 2 (strain 86/87) GN=9 PE=3 SV=1 | 15 | 606 | 8.0E-53 |
sp|O36363|DPOL_ALHV1 | DNA polymerase catalytic subunit OS=Alcelaphine herpesvirus 1 (strain C500) GN=9 PE=3 SV=1 | 15 | 570 | 2.0E-50 |
sp|P28857|DPOL_HHV6U | DNA polymerase catalytic subunit OS=Human herpesvirus 6A (strain Uganda-1102) GN=U38 PE=3 SV=1 | 69 | 570 | 3.0E-46 |
sp|P52342|DPOL_HHV7J | DNA polymerase catalytic subunit OS=Human herpesvirus 7 (strain JI) GN=U38 PE=3 SV=1 | 70 | 577 | 5.0E-46 |
sp|Q9QJ32|DPOL_HHV6Z | DNA polymerase catalytic subunit OS=Human herpesvirus 6B (strain Z29) GN=U38 PE=3 SV=1 | 69 | 570 | 2.0E-45 |
sp|Q9DKT8|DPOL_ELHVK | DNA polymerase catalytic subunit OS=Elephantid herpesvirus 1 (isolate Asian elephant/Berlin/Kiba/1998) PE=3 SV=1 | 70 | 553 | 3.0E-45 |
sp|Q69025|DPOL_GPCMV | DNA polymerase OS=Guinea pig cytomegalovirus (strain 22122) GN=UL54 PE=3 SV=3 | 68 | 576 | 2.0E-44 |
sp|Q6UDK1|DPOL_PSHV1 | DNA polymerase catalytic subunit OS=Psittacid herpesvirus 1 (isolate Amazon parrot/-/97-0001/1997) GN=UL30 PE=3 SV=1 | 69 | 576 | 4.0E-44 |
sp|P09854|DPOL_HHV1S | DNA polymerase catalytic subunit OS=Human herpesvirus 1 (strain SC16) GN=UL30 PE=3 SV=1 | 70 | 570 | 1.0E-43 |
sp|P04292|DPOL_HHV1K | DNA polymerase catalytic subunit OS=Human herpesvirus 1 (strain KOS) GN=UL30 PE=1 SV=1 | 70 | 570 | 2.0E-43 |
sp|P07917|DPOL_HHV1A | DNA polymerase catalytic subunit OS=Human herpesvirus 1 (strain Angelotti) GN=UL30 PE=1 SV=1 | 70 | 570 | 2.0E-43 |
sp|P04293|DPOL_HHV11 | DNA polymerase catalytic subunit OS=Human herpesvirus 1 (strain 17) GN=UL30 PE=1 SV=2 | 70 | 570 | 3.0E-43 |
sp|P07918|DPOL_HHV21 | DNA polymerase catalytic subunit OS=Human herpesvirus 2 (strain 186) GN=UL30 PE=3 SV=1 | 70 | 570 | 6.0E-43 |
sp|P89453|DPOL_HHV2H | DNA polymerase catalytic subunit OS=Human herpesvirus 2 (strain HG52) GN=UL30 PE=3 SV=1 | 70 | 570 | 6.0E-43 |
sp|P09252|DPOL_VZVD | DNA polymerase catalytic subunit OS=Varicella-zoster virus (strain Dumas) GN=ORF28 PE=3 SV=1 | 70 | 577 | 9.0E-43 |
sp|Q4JQU7|DPOL_VZVO | DNA polymerase catalytic subunit OS=Varicella-zoster virus (strain Oka vaccine) GN=ORF28 PE=3 SV=1 | 70 | 577 | 2.0E-42 |
sp|O71121|DPOL_RHCM6 | DNA polymerase catalytic subunit OS=Rhesus cytomegalovirus (strain 68-1) GN=UL54 PE=3 SV=1 | 69 | 577 | 4.0E-41 |
sp|Q9E6N9|DPOL_GAHVM | DNA polymerase catalytic subunit OS=Gallid herpesvirus 2 (strain Chicken/Md5/ATCC VR-987) GN=MDV043 PE=3 SV=1 | 70 | 570 | 2.0E-40 |
sp|Q6S6P1|DPOL_EHV1V | DNA polymerase catalytic subunit OS=Equine herpesvirus 1 (strain V592) GN=30 PE=3 SV=1 | 21 | 553 | 2.0E-39 |
sp|P28858|DPOL_EHV1B | DNA polymerase catalytic subunit OS=Equine herpesvirus 1 (strain Ab4p) GN=30 PE=3 SV=1 | 21 | 553 | 3.0E-39 |
sp|P56689|DPOL_THEGO | DNA polymerase OS=Thermococcus gorgonarius GN=pol PE=1 SV=1 | 74 | 594 | 6.0E-34 |
sp|Q56366|DPOL_THES9 | DNA polymerase OS=Thermococcus sp. (strain 9oN-7) GN=pol PE=1 SV=1 | 74 | 591 | 1.0E-33 |
sp|Q6SW77|DPOL_HCMVM | DNA polymerase catalytic subunit OS=Human cytomegalovirus (strain Merlin) GN=UL54 PE=3 SV=1 | 292 | 576 | 8.0E-32 |
sp|P08546|DPOL_HCMVA | DNA polymerase catalytic subunit OS=Human cytomegalovirus (strain AD169) GN=UL54 PE=1 SV=2 | 292 | 576 | 9.0E-32 |
sp|P27172|DPOL_MUHVS | DNA polymerase catalytic subunit OS=Murid herpesvirus 1 (strain Smith) GN=UL54 PE=3 SV=1 | 274 | 609 | 2.0E-31 |
sp|Q85428|DPOL_RCMVM | DNA polymerase catalytic subunit OS=Rat cytomegalovirus (strain Maastricht) GN=UL54 PE=3 SV=2 | 276 | 609 | 6.0E-31 |
sp|P30320|DPOL_PBCVN | DNA polymerase OS=Paramecium bursaria Chlorella virus NY2A GN=DPO PE=3 SV=1 | 69 | 574 | 1.0E-30 |
sp|P30321|DPOL_PBCV1 | DNA polymerase OS=Paramecium bursaria Chlorella virus 1 GN=DPO PE=3 SV=2 | 69 | 574 | 5.0E-30 |
sp|O93746|DPOL2_AERPE | DNA polymerase 2 OS=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=polB PE=3 SV=3 | 72 | 601 | 1.0E-29 |
sp|P61876|DPOL_PYRWO | DNA polymerase OS=Pyrococcus woesei GN=pol PE=1 SV=1 | 74 | 589 | 2.0E-29 |
sp|P61875|DPOL_PYRFU | DNA polymerase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pol PE=1 SV=1 | 74 | 589 | 2.0E-29 |
sp|O70736|DPOL_RSIV | DNA polymerase OS=Red sea bream iridovirus PE=3 SV=1 | 68 | 603 | 4.0E-28 |
sp|Q7SIG7|DPOL_DESST | DNA polymerase OS=Desulfurococcus sp. (strain Tok) GN=pol PE=1 SV=1 | 46 | 594 | 6.0E-28 |
sp|O29753|DPOL_ARCFU | DNA polymerase OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=pol PE=3 SV=1 | 47 | 603 | 2.0E-26 |
sp|Q196U0|DPOL_IIV3 | DNA polymerase 120R OS=Invertebrate iridescent virus 3 GN=IIV3-120R PE=3 SV=1 | 64 | 570 | 2.0E-25 |
sp|Q9HH06|DPOL_PYRGL | DNA polymerase OS=Pyrococcus glycovorans GN=pol PE=3 SV=1 | 49 | 591 | 3.0E-25 |
sp|P0CL77|DPOL_PYRAB | DNA polymerase 1 OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=polI PE=1 SV=1 | 46 | 591 | 8.0E-25 |
sp|Q9FHA3|DPOLA_ARATH | DNA polymerase alpha catalytic subunit OS=Arabidopsis thaliana GN=POLA PE=3 SV=2 | 73 | 553 | 2.0E-24 |
sp|Q94636|DPOLA_STENO | DNA polymerase alpha catalytic subunit OS=Sterkiella nova PE=3 SV=1 | 84 | 604 | 3.0E-24 |
sp|P0CL76|DPOL_PYRAY | DNA polymerase 1 OS=Pyrococcus abyssi GN=polI PE=1 SV=1 | 46 | 591 | 5.0E-24 |
sp|Q9YUS3|DPOL_TUHV1 | DNA polymerase catalytic subunit OS=Tupaiid herpesvirus 1 (strain 1) GN=DPOL PE=3 SV=1 | 368 | 576 | 4.0E-23 |
sp|Q9YUS2|DPOL_TUHV2 | DNA polymerase catalytic subunit OS=Tupaiid herpesvirus (strain 2) GN=DPOL PE=3 SV=1 | 368 | 576 | 4.0E-23 |
sp|O48653|DPOLA_ORYSJ | DNA polymerase alpha catalytic subunit OS=Oryza sativa subsp. japonica GN=Os01g0868300 PE=2 SV=2 | 45 | 553 | 4.0E-22 |
sp|P28040|DPOA_SCHPO | DNA polymerase alpha catalytic subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pol1 PE=1 SV=1 | 67 | 553 | 1.0E-20 |
sp|P52025|DPOL_METVO | DNA polymerase OS=Methanococcus voltae GN=pol PE=3 SV=1 | 75 | 599 | 2.0E-19 |
sp|Q4U3V0|DPOL_TNAVC | DNA polymerase OS=Trichoplusia ni ascovirus 2c GN=ORF1 PE=3 SV=2 | 369 | 604 | 2.0E-19 |
sp|O27276|DPOL1_METTH | DNA polymerase PolB subunit 1 OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=polB1 PE=1 SV=1 | 1 | 483 | 3.0E-19 |
sp|Q54SV8|DPOLA_DICDI | DNA polymerase alpha catalytic subunit OS=Dictyostelium discoideum GN=pola1 PE=3 SV=1 | 66 | 603 | 5.0E-19 |
sp|P27727|DPOLA_TRYBB | DNA polymerase alpha catalytic subunit OS=Trypanosoma brucei brucei PE=3 SV=1 | 291 | 567 | 3.0E-18 |
sp|Q27152|DPOLA_OXYTR | DNA polymerase alpha catalytic subunit OS=Oxytricha trifallax PE=3 SV=1 | 291 | 517 | 3.0E-18 |
sp|O89042|DPOLA_RAT | DNA polymerase alpha catalytic subunit (Fragment) OS=Rattus norvegicus GN=Pola1 PE=2 SV=1 | 87 | 553 | 3.0E-18 |
sp|A4KX57|DPOL_HVAVE | DNA polymerase OS=Heliothis virescens ascovirus 3e GN=ORF1 PE=3 SV=1 | 374 | 595 | 2.0E-17 |
sp|P09884|DPOLA_HUMAN | DNA polymerase alpha catalytic subunit OS=Homo sapiens GN=POLA1 PE=1 SV=2 | 87 | 553 | 2.0E-16 |
sp|Q9DE46|DPOLA_XENLA | DNA polymerase alpha catalytic subunit OS=Xenopus laevis GN=pola1 PE=1 SV=1 | 291 | 553 | 2.0E-16 |
sp|P33609|DPOLA_MOUSE | DNA polymerase alpha catalytic subunit OS=Mus musculus GN=Pola1 PE=1 SV=2 | 291 | 553 | 3.0E-16 |
sp|O00874|DPOLA_LEIDO | DNA polymerase alpha catalytic subunit OS=Leishmania donovani PE=3 SV=1 | 291 | 603 | 6.0E-16 |
sp|Q9HH05|DPOL_THEHY | DNA polymerase (Fragment) OS=Thermococcus hydrothermalis GN=pol PE=1 SV=1 | 46 | 538 | 2.0E-15 |
sp|A7U6F2|DPOL_POV01 | DNA polymerase OS=Pyramimonas orientalis virus GN=dpo PE=3 SV=1 | 399 | 603 | 3.0E-15 |
sp|Q9HH84|DPOL_THEG8 | DNA polymerase OS=Thermococcus sp. (strain GE8) GN=pol PE=3 SV=1 | 49 | 447 | 8.0E-15 |
sp|P26019|DPOLA_DROME | DNA polymerase alpha catalytic subunit OS=Drosophila melanogaster GN=DNApol-alpha180 PE=1 SV=2 | 120 | 553 | 4.0E-14 |
sp|Q9YUS3|DPOL_TUHV1 | DNA polymerase catalytic subunit OS=Tupaiid herpesvirus 1 (strain 1) GN=DPOL PE=3 SV=1 | 70 | 337 | 8.0E-14 |
sp|Q779J8|DPOL_SFAVA | DNA polymerase OS=Spodoptera frugiperda ascovirus 1a GN=ORF1 PE=3 SV=1 | 374 | 594 | 8.0E-14 |
sp|Q9YUS2|DPOL_TUHV2 | DNA polymerase catalytic subunit OS=Tupaiid herpesvirus (strain 2) GN=DPOL PE=3 SV=1 | 70 | 337 | 1.0E-13 |
sp|Q6GZR5|DPOL_FRG3G | Putative DNA polymerase 060R OS=Frog virus 3 (isolate Goorha) GN=FV3-060R PE=3 SV=1 | 366 | 574 | 2.0E-13 |
sp|O59610|DPOL_PYRHO | DNA polymerase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=pol PE=3 SV=1 | 46 | 421 | 4.0E-13 |
sp|Q51334|DPOL_PYRSD | DNA polymerase OS=Pyrococcus sp. (strain GB-D) GN=pol PE=1 SV=1 | 74 | 421 | 2.0E-12 |
sp|P21189|DPO2_ECOLI | DNA polymerase II OS=Escherichia coli (strain K12) GN=polB PE=1 SV=2 | 89 | 596 | 1.0E-11 |
sp|P13382|DPOA_YEAST | DNA polymerase alpha catalytic subunit A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=POL1 PE=1 SV=2 | 291 | 574 | 3.0E-11 |
sp|P30317|DPOL_THELI | DNA polymerase OS=Thermococcus litoralis GN=pol PE=1 SV=1 | 46 | 421 | 2.0E-10 |
sp|Q6GZR5|DPOL_FRG3G | Putative DNA polymerase 060R OS=Frog virus 3 (isolate Goorha) GN=FV3-060R PE=3 SV=1 | 70 | 326 | 1.0E-09 |
sp|P77933|DPOL_THEKO | DNA polymerase OS=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=pol PE=1 SV=3 | 437 | 591 | 4.0E-09 |
sp|P74918|DPOL_THEFM | DNA polymerase OS=Thermococcus fumicolans GN=pol PE=1 SV=1 | 306 | 474 | 1.0E-08 |
sp|Q5UQR0|DPOL_MIMIV | DNA polymerase OS=Acanthamoeba polyphaga mimivirus GN=POLB PE=3 SV=1 | 153 | 317 | 4.0E-07 |
sp|Q6WI70|DPOL_BPKVM | DNA polymerase OS=Vibrio phage KVP40 (isolate Vibrio parahaemolyticus/Japan/Matsuzaki/1991) GN=43 PE=3 SV=1 | 60 | 574 | 4.0E-07 |
sp|Q9QSK2|DPOL_IIV6 | DNA polymerase 037L OS=Invertebrate iridescent virus 6 GN=DPOL PE=3 SV=1 | 397 | 554 | 1.0E-06 |
sp|O05706|DPOL3_SULSH | DNA polymerase 3 OS=Sulfolobus shibatae GN=dpo3 PE=3 SV=1 | 72 | 600 | 2.0E-06 |
sp|Q5UQR0|DPOL_MIMIV | DNA polymerase OS=Acanthamoeba polyphaga mimivirus GN=POLB PE=3 SV=1 | 467 | 603 | 5.0E-06 |
sp|P21402|DPOL_FOWPN | DNA polymerase OS=Fowlpox virus (strain NVSL) GN=POL PE=3 SV=2 | 375 | 604 | 9.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0000166 | nucleotide binding | Yes |
GO:0003677 | DNA binding | Yes |
GO:0036094 | small molecule binding | No |
GO:1901265 | nucleoside phosphate binding | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0005488 | binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0003676 | nucleic acid binding | No |
GO:0003674 | molecular_function | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm|Nucleus | Nuclear localization signal | 0.5576 | 0.6129 | 0.1412 | 0.1769 | 0.5224 | 0.0429 | 0.0695 | 0.0876 | 0.1409 | 0.0041 |
Orthofinder run ID | 4 |
Orthogroup | 1955 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2104 MSLEVHVNTRGKLVPNPEEDEVQCIFWACQSDEKTNNTQDAVNSLQFGIIVLSADEAACRRMRQCTRSEVVEESS ELDVMIRMVEVVRTFDPDVLTGFEVHGGSWGYLIERARHKYDLNLCDEFSRMKSDSHGRFGKNNDRWGFNTTSTI RITGRHMINIWRAMQNELNLLQYTMENVAWHLLHLRVPHYSWKTLTQWYKSGKPRDLSKLLRYYETRTRLDMKIL EANELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFMIVSPSKKQVGGQNALECLPLVMEPQSAFY TSPLVVLDFQSLYPSVMIAYNYCYSTFLGRIKDWRGTNKMGFSEYERQRGLLVLLQDYINIAPNGMMYVKADIRK SLLAKMLTEILETRVMVKSGMKKDTDDKTLQRLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRE TLERAIAYVHSVERWGAEVVYGDTDSMFVYLKGRTREQAFALGEEMARAITEMNPRPVKLKFEKVYQPCVLLAKK RYVGHKYESRLAAQPEFEAKGIETVRRDGTPAEQKMEEKALRLLFETADLSRVKRYFQQQCDKIMRGAVSVSDFC FAREPPHAR* |
Coding | >Hirsu2|2104 ATGAGCCTCGAGGTTCATGTCAACACCAGAGGCAAGCTTGTCCCCAACCCCGAGGAGGACGAAGTGCAGTGCATC TTCTGGGCTTGCCAGTCGGACGAGAAGACAAACAACACTCAGGACGCCGTCAATTCGCTGCAGTTTGGAATCATC GTCCTCTCTGCCGATGAAGCGGCGTGTAGGAGGATGCGGCAGTGCACGAGATCCGAGGTTGTCGAAGAAAGCTCC GAGCTCGACGTCATGATTCGCATGGTTGAGGTGGTGAGGACGTTCGATCCGGATGTGTTGACCGGCTTCGAGGTT CATGGCGGCTCATGGGGCTATCTGATTGAACGCGCGAGACACAAGTACGACCTGAACCTGTGCGACGAATTCTCC CGGATGAAGTCGGACTCGCACGGCCGCTTTGGGAAGAACAATGACCGCTGGGGCTTCAACACGACATCAACGATT CGCATCACCGGCAGACACATGATCAACATCTGGAGAGCGATGCAGAACGAGCTGAACCTTCTCCAGTACACGATG GAAAACGTGGCGTGGCATCTCTTGCATCTCAGAGTCCCGCACTACTCGTGGAAGACGCTCACACAATGGTACAAG AGCGGGAAGCCCAGGGACCTGAGCAAGCTTTTGCGATACTACGAGACCCGGACCCGACTGGACATGAAGATCCTC GAGGCCAACGAGCTGATCCCGAGGACGAGCGAGCAAGCGAGGCTGCTGGGCGTCGACTTCTTCTCCGTCTTCTCC CGAGGCTCACAGTTCAAGGTGGAGTCCATCATGTTCAGGATTGCCAAGCCGGAAAACTTCATGATCGTGTCGCCG AGCAAGAAGCAGGTCGGCGGCCAGAACGCCCTGGAGTGTCTGCCTCTGGTCATGGAGCCGCAGAGCGCGTTCTAC ACCAGCCCGCTCGTCGTGCTGGACTTTCAGAGCCTGTATCCGAGCGTGATGATTGCGTACAACTACTGCTACTCG ACATTCCTGGGCCGGATCAAGGACTGGCGCGGGACGAACAAGATGGGCTTCTCCGAGTACGAGCGCCAGCGCGGG CTGCTGGTCCTCCTGCAGGACTACATCAACATTGCGCCCAACGGGATGATGTACGTCAAGGCGGACATCCGGAAG TCGCTGCTGGCCAAGATGTTGACGGAGATCTTGGAGACGCGGGTGATGGTGAAGAGCGGGATGAAGAAGGACACG GACGACAAGACGCTGCAGCGGCTGCTGAACAACCGGCAGCTGGCCCTGAAGCTGCTGGCCAACGTGACGTACGGC TACACGTCGGCCTCGTTCTCGGGGCGGATGCCGTGCTCCGAGATCGCGGACAGCATCGTGCAGACGGGGCGCGAG ACGCTGGAGCGGGCCATCGCCTACGTGCACTCGGTGGAGCGGTGGGGCGCCGAGGTCGTGTACGGCGACACGGAC AGCATGTTCGTCTACCTCAAGGGCCGGACGCGGGAGCAGGCGTTCGCGTTGGGCGAGGAGATGGCGCGGGCGATC ACGGAGATGAACCCGCGGCCGGTCAAGCTCAAGTTCGAGAAGGTCTACCAGCCGTGCGTGCTGCTGGCGAAGAAG CGGTACGTCGGCCACAAGTACGAGAGCCGGCTCGCGGCGCAGCCCGAGTTCGAGGCCAAGGGCATCGAGACGGTG CGGCGGGACGGCACGCCGGCGGAGCAGAAGATGGAGGAGAAGGCGCTGCGGCTGCTGTTCGAGACGGCGGACCTG AGCCGCGTCAAGCGCTACTTCCAGCAGCAGTGCGACAAGATCATGCGCGGCGCCGTCTCGGTGTCCGACTTTTGC TTCGCGCGCGAGCCGCCGCATGCTCGATGA |
Transcript | >Hirsu2|2104 ATGAGCCTCGAGGTTCATGTCAACACCAGAGGCAAGCTTGTCCCCAACCCCGAGGAGGACGAAGTGCAGTGCATC TTCTGGGCTTGCCAGTCGGACGAGAAGACAAACAACACTCAGGACGCCGTCAATTCGCTGCAGTTTGGAATCATC GTCCTCTCTGCCGATGAAGCGGCGTGTAGGAGGATGCGGCAGTGCACGAGATCCGAGGTTGTCGAAGAAAGCTCC GAGCTCGACGTCATGATTCGCATGGTTGAGGTGGTGAGGACGTTCGATCCGGATGTGTTGACCGGCTTCGAGGTT CATGGCGGCTCATGGGGCTATCTGATTGAACGCGCGAGACACAAGTACGACCTGAACCTGTGCGACGAATTCTCC CGGATGAAGTCGGACTCGCACGGCCGCTTTGGGAAGAACAATGACCGCTGGGGCTTCAACACGACATCAACGATT CGCATCACCGGCAGACACATGATCAACATCTGGAGAGCGATGCAGAACGAGCTGAACCTTCTCCAGTACACGATG GAAAACGTGGCGTGGCATCTCTTGCATCTCAGAGTCCCGCACTACTCGTGGAAGACGCTCACACAATGGTACAAG AGCGGGAAGCCCAGGGACCTGAGCAAGCTTTTGCGATACTACGAGACCCGGACCCGACTGGACATGAAGATCCTC GAGGCCAACGAGCTGATCCCGAGGACGAGCGAGCAAGCGAGGCTGCTGGGCGTCGACTTCTTCTCCGTCTTCTCC CGAGGCTCACAGTTCAAGGTGGAGTCCATCATGTTCAGGATTGCCAAGCCGGAAAACTTCATGATCGTGTCGCCG AGCAAGAAGCAGGTCGGCGGCCAGAACGCCCTGGAGTGTCTGCCTCTGGTCATGGAGCCGCAGAGCGCGTTCTAC ACCAGCCCGCTCGTCGTGCTGGACTTTCAGAGCCTGTATCCGAGCGTGATGATTGCGTACAACTACTGCTACTCG ACATTCCTGGGCCGGATCAAGGACTGGCGCGGGACGAACAAGATGGGCTTCTCCGAGTACGAGCGCCAGCGCGGG CTGCTGGTCCTCCTGCAGGACTACATCAACATTGCGCCCAACGGGATGATGTACGTCAAGGCGGACATCCGGAAG TCGCTGCTGGCCAAGATGTTGACGGAGATCTTGGAGACGCGGGTGATGGTGAAGAGCGGGATGAAGAAGGACACG GACGACAAGACGCTGCAGCGGCTGCTGAACAACCGGCAGCTGGCCCTGAAGCTGCTGGCCAACGTGACGTACGGC TACACGTCGGCCTCGTTCTCGGGGCGGATGCCGTGCTCCGAGATCGCGGACAGCATCGTGCAGACGGGGCGCGAG ACGCTGGAGCGGGCCATCGCCTACGTGCACTCGGTGGAGCGGTGGGGCGCCGAGGTCGTGTACGGCGACACGGAC AGCATGTTCGTCTACCTCAAGGGCCGGACGCGGGAGCAGGCGTTCGCGTTGGGCGAGGAGATGGCGCGGGCGATC ACGGAGATGAACCCGCGGCCGGTCAAGCTCAAGTTCGAGAAGGTCTACCAGCCGTGCGTGCTGCTGGCGAAGAAG CGGTACGTCGGCCACAAGTACGAGAGCCGGCTCGCGGCGCAGCCCGAGTTCGAGGCCAAGGGCATCGAGACGGTG CGGCGGGACGGCACGCCGGCGGAGCAGAAGATGGAGGAGAAGGCGCTGCGGCTGCTGTTCGAGACGGCGGACCTG AGCCGCGTCAAGCGCTACTTCCAGCAGCAGTGCGACAAGATCATGCGCGGCGCCGTCTCGGTGTCCGACTTTTGC TTCGCGCGCGAGCCGCCGCATGCTCGATGA |
Gene | >Hirsu2|2104 ATGAGCCTCGAGGTTCATGTCAACACCAGAGGCAAGCTTGTCCCCAACCCCGAGGAGGACGAAGTGCAGTGCATC TTCTGGGCTTGCCAGTCGGACGAGAAGACAAACAACACTCAGGACGCCGTCAATTCGCTGCAGTTTGGAATCATC GTCCTCTCTGCCGATGAAGCGGCGTGTAGGAGGATGCGGCAGTGCACGAGATCCGAGGTTGTCGAAGAAAGCTCC GAGCTCGACGTCATGATTCGCATGGTTGAGGTGGTGAGGACGTTCGATCCGGATGTGTTGACCGGCTTCGAGGTT CATGGCGGCTCATGGGGCTATCTGATTGAACGCGCGAGACACAAGTACGACCTGAACCTGTGCGACGAATTCTCC CGGATGAAGTCGGACTCGCACGGCCGCTTTGGGAAGAACAATGACCGCTGGGGCTTCAACACGACATCAACGATT CGCATCACCGGCAGACACATGATCAACATCTGGAGAGCGATGCAGAACGAGCTGAACCTTCTCCAGTACACGATG GAAAACGTGGCGTGGCATCTCTTGCATCTCAGAGTCCCGCACTACTCGTGGAAGACGCTCACACAATGGTACAAG AGCGGGAAGCCCAGGGACCTGAGCAAGCTTTTGCGATACTACGAGACCCGGACCCGACTGGACATGAAGATCCTC GAGGCCAACGAGCTGATCCCGAGGACGAGCGAGCAAGCGAGGCTGCTGGGCGTCGACTTCTTCTCCGTCTTCTCC CGAGGCTCACAGTTCAAGGTGGAGTCCATCATGTTCAGGATTGCCAAGCCGGAAAACTTCATGATCGTGTCGCCG AGCAAGAAGCAGGTCGGCGGCCAGAACGCCCTGGAGTGTCTGCCTCTGGTCATGGAGCCGCAGAGCGCGTTCTAC ACCAGCCCGCTCGTCGTGCTGGACTTTCAGAGCCTGTATCCGAGCGTGATGATTGCGTACAACTACTGCTACTCG ACATTCCTGGGCCGGATCAAGGACTGGCGCGGGACGAACAAGATGGGCTTCTCCGAGTACGAGCGCCAGCGCGGG CTGCTGGTCCTCCTGCAGGACTACATCAACATTGCGCCCAACGGGATGATGTACGTCAAGGCGGACATCCGGAAG TCGCTGCTGGCCAAGATGTTGACGGAGATCTTGGAGACGCGGGTGATGGTGAAGAGCGGGATGAAGAAGGACACG GACGACAAGACGCTGCAGCGGCTGCTGAACAACCGGCAGCTGGCCCTGAAGCTGCTGGCCAACGTGACGTACGGC TACACGTCGGCCTCGTTCTCGGGGCGGATGCCGTGCTCCGAGATCGCGGACAGCATCGTGCAGACGGGGCGCGAG ACGCTGGAGCGGGCCATCGCCTACGTGCACTCGGTGGAGCGGTGGGGCGCCGAGGTCGTGTACGGCGACACGGAC AGCATGTTCGTCTACCTCAAGGGCCGGACGCGGGAGCAGGCGTTCGCGTTGGGCGAGGAGATGGCGCGGGCGATC ACGGAGATGAACCCGCGGCCGGTCAAGCTCAAGTTCGAGAAGGTCTACCAGCCGTGCGTGCTGCTGGCGAAGAAG CGGTACGTCGGCCACAAGTACGAGAGCCGGCTCGCGGCGCAGCCCGAGTTCGAGGCCAAGGGCATCGAGACGGTG CGGCGGGACGGCACGCCGGCGGAGCAGAAGATGGAGGAGAAGGCGCTGCGGCTGCTGTTCGAGACGGCGGACCTG AGCCGCGTCAAGCGCTACTTCCAGCAGCAGTGCGACAAGATCATGCGCGGCGCCGTCTCGGTGTCCGACTTTTGC TTCGCGCGCGAGGTCCGGCTCGGCTCCTACTCGGACCGCGGCCCGGCCCCGCCCGGCGCCCTCGTCAGCAGCCGC CGCATGCTCGATGA |