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| Protein ID | Hirsu2|2093 |
| Gene name | |
| Location | Contig_149:5259..6304 |
| Strand | + |
| Gene length (bp) | 1045 |
| Transcript length (bp) | 930 |
| Coding sequence length (bp) | 930 |
| Protein length (aa) | 310 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P87175|APN2_SCHPO | DNA-(apurinic or apyrimidinic site) lyase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=apn2 PE=1 SV=1 | 214 | 308 | 6.0E-12 |
| sp|Q5E9N9|APEX2_BOVIN | DNA-(apurinic or apyrimidinic site) lyase 2 OS=Bos taurus GN=APEX2 PE=2 SV=1 | 155 | 301 | 9.0E-10 |
| sp|Q9UBZ4|APEX2_HUMAN | DNA-(apurinic or apyrimidinic site) lyase 2 OS=Homo sapiens GN=APEX2 PE=1 SV=1 | 155 | 301 | 7.0E-08 |
| sp|Q68G58|APEX2_MOUSE | DNA-(apurinic or apyrimidinic site) lyase 2 OS=Mus musculus GN=Apex2 PE=1 SV=1 | 143 | 301 | 2.0E-06 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | Nuclear localization signal | 0.1629 | 0.9467 | 0.0974 | 0.0082 | 0.1241 | 0.0221 | 0.0333 | 0.0055 | 0.0107 | 0.0091 |
| Orthofinder run ID | 4 |
| Orthogroup | 8981 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|2093 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2093 MADSVIVGDAEAALADVMNPPGMFQGGKRVREWSQKDVLPLSAKLIPEFDRRQSIRDMFTKKPELTASSQPVPQR EATSAAEELPSGPRPSSAPPDGHESTGLAAASAAASGGTTVQPAASGPRTAPQLKRPPRPADTSGRSSKRAKAAA DLNGTKAKAASGQKTLQGFFKPVGEKTGKDSTAGEDTEPALPPDAATATLSPRRSQQDSEAPKACEASPSKNSAQ ATDRVFDPIQAKESWSKLLGKRQLPRCEHNEPCISLVTKKPGVNCGRSFYICPRPLGPSGEKEKDSEWRCGTFIW SSDWSGSAS* |
| Coding | >Hirsu2|2093 ATGGCGGATAGCGTCATCGTCGGCGACGCAGAGGCTGCGCTGGCCGACGTGATGAACCCGCCCGGCATGTTTCAG GGCGGCAAACGAGTCCGCGAGTGGTCTCAGAAGGACGTGCTGCCCTTGTCTGCCAAGTTGATACCCGAATTTGAC CGTCGCCAGAGCATCCGCGACATGTTTACCAAGAAGCCCGAGTTGACGGCGTCCAGTCAGCCAGTACCGCAGCGC GAGGCCACATCCGCAGCAGAAGAGCTTCCCTCCGGTCCACGCCCATCTAGCGCGCCACCAGATGGCCACGAGTCG ACAGGGCTTGCCGCAGCATCCGCCGCCGCCAGTGGAGGCACGACGGTCCAGCCCGCGGCCTCTGGTCCTCGAACA GCACCGCAGCTGAAGCGCCCTCCGAGGCCCGCAGACACCTCTGGGCGGTCCTCGAAACGGGCCAAAGCCGCCGCC GACCTGAACGGTACGAAAGCCAAAGCAGCTTCGGGCCAAAAGACTCTGCAGGGCTTCTTCAAGCCAGTGGGCGAG AAAACAGGCAAGGACAGCACCGCGGGCGAAGACACCGAGCCAGCCCTCCCGCCCGACGCTGCCACGGCAACGCTG TCGCCGCGGCGGAGTCAGCAGGACAGCGAGGCGCCCAAAGCGTGCGAGGCGTCGCCCTCGAAGAACAGCGCGCAG GCGACGGACCGCGTCTTCGATCCGATACAGGCCAAGGAGTCGTGGTCGAAGCTCCTCGGCAAGCGGCAGCTGCCC CGCTGCGAGCACAACGAGCCGTGCATCAGCCTCGTCACCAAGAAGCCCGGTGTGAACTGCGGTCGATCCTTTTAC ATCTGTCCTCGGCCGCTCGGGCCATCTGGCGAGAAGGAAAAGGACTCGGAGTGGCGATGTGGCACGTTCATCTGG AGTAGCGACTGGAGCGGCTCTGCGTCATGA |
| Transcript | >Hirsu2|2093 ATGGCGGATAGCGTCATCGTCGGCGACGCAGAGGCTGCGCTGGCCGACGTGATGAACCCGCCCGGCATGTTTCAG GGCGGCAAACGAGTCCGCGAGTGGTCTCAGAAGGACGTGCTGCCCTTGTCTGCCAAGTTGATACCCGAATTTGAC CGTCGCCAGAGCATCCGCGACATGTTTACCAAGAAGCCCGAGTTGACGGCGTCCAGTCAGCCAGTACCGCAGCGC GAGGCCACATCCGCAGCAGAAGAGCTTCCCTCCGGTCCACGCCCATCTAGCGCGCCACCAGATGGCCACGAGTCG ACAGGGCTTGCCGCAGCATCCGCCGCCGCCAGTGGAGGCACGACGGTCCAGCCCGCGGCCTCTGGTCCTCGAACA GCACCGCAGCTGAAGCGCCCTCCGAGGCCCGCAGACACCTCTGGGCGGTCCTCGAAACGGGCCAAAGCCGCCGCC GACCTGAACGGTACGAAAGCCAAAGCAGCTTCGGGCCAAAAGACTCTGCAGGGCTTCTTCAAGCCAGTGGGCGAG AAAACAGGCAAGGACAGCACCGCGGGCGAAGACACCGAGCCAGCCCTCCCGCCCGACGCTGCCACGGCAACGCTG TCGCCGCGGCGGAGTCAGCAGGACAGCGAGGCGCCCAAAGCGTGCGAGGCGTCGCCCTCGAAGAACAGCGCGCAG GCGACGGACCGCGTCTTCGATCCGATACAGGCCAAGGAGTCGTGGTCGAAGCTCCTCGGCAAGCGGCAGCTGCCC CGCTGCGAGCACAACGAGCCGTGCATCAGCCTCGTCACCAAGAAGCCCGGTGTGAACTGCGGTCGATCCTTTTAC ATCTGTCCTCGGCCGCTCGGGCCATCTGGCGAGAAGGAAAAGGACTCGGAGTGGCGATGTGGCACGTTCATCTGG AGTAGCGACTGGAGCGGCTCTGCGTCATGA |
| Gene | >Hirsu2|2093 ATGGCGGATAGCGTCATCGTCGGCGACGCAGAGGCTGCGCTGGCCGACGTGATGAACCCGCCCGGCATGTTTCAG GGCGGCAAACGAGTCCGCGAGTGGTCTCAGAAGGACGTGCTGCCCTTGTCTGCCAAGTTGATACCCGAATTTGAC CGTCGCCAGAGCATCCGCGACATGTTTACCAAGAAGCCCGAGTTGACGGCGTCCAGTCAGCCAGTACCGCAGCGC GAGGCCACATCCGCAGCAGAAGAGCTTCCCTCCGGTCCACGCCCATCTAGCGCGCCACCAGATGGCCACGAGTCG ACAGGGCTTGCCGCAGCATCCGCCGCCGCCAGTGGAGGCACGACGGTCCAGCCCGCGGCCTCTGGTCCTCGAACA GCACCGCAGCTGAAGCGCCCTCCGAGGCCCGCAGACACCTCTGGGCGGTCCTCGAAACGGGCCAAAGCCGCCGCC GACCTGAACGGTACGAAAGCCAAAGCAGCTTCGGGCCAAAAGACTCTGCAGGGCTTCTTCAAGCCAGTGGGCGAG AAAACAGGCAAGGACAGCACCGCGGGCGAAGACACCGAGCCAGCCCTCCCGCCCGACGCTGCCACGGCAACGCTG TCGCCGCGGCGGAGTCAGCAGGACAGCGAGGCGCCCAAAGCGTGCGAGGCGTCGCCCTCGAAGAACAGCGCGCAG GCGACGGACCGCGTCTTCGATCCGATACAGGCCAAGGAGTCGTGGTCGAAGCTCCTCGGCAAGCGGCAGCTGCCC CGCTGCGAGCACAACGAGCCGTGCATCAGCCTCGTCACCAAGAAGCCCGGTGTGAACTGCGGTGAGTCTCGCTGC GCCGGACTGGCCTGTTCGGCACACCTCCCCTCCCCCGCGCACCTTTGCCGTTTCCCGCAACGAGCCCAGGGCTAG AGGCGCGCTGGCTGACGACGCCGCAGGTCGATCCTTTTACATCTGTCCTCGGCCGCTCGGGCCATCTGGCGAGAA GGAAAAGGACTCGGAGTGGCGATGTGGCACGTTCATCTGGAGTAGCGACTGGAGCGGCTCTGCGTCATGA |