© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2087 |
| Gene name | |
| Location | Contig_1489:847..2150 |
| Strand | - |
| Gene length (bp) | 1303 |
| Transcript length (bp) | 1263 |
| Coding sequence length (bp) | 1263 |
| Protein length (aa) | 421 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | Nuclear localization signal | 0.5444 | 0.6976 | 0.311 | 0.1281 | 0.1634 | 0.0376 | 0.1215 | 0.0801 | 0.1165 | 0.0061 |
| Orthofinder run ID | 4 |
| Orthogroup | 8978 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|2087 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2087 MYVVGLCPGAALAHDGAPTIRTTRAVRRRRPIAPPGPRPMSMAAAARQAALRCLETLARPGLRESGGVCLSRAEA NDDRALNEQRERALGALGSLQNPRGPTPHLSGSLAVSVWRGTRLGTSRKADTALESKYRPADGYLDAADWPRPPG CRIRRRGALTNPTAAALALTIHHHHRPHSHVSGYGKSMDGCVCMRSRSGVTTILGRRTLPQGTHTAKGPKQRERE RERRQDPGRRPDRDTPGRPQAIFYFCSGAMSSRLQCANGTSDRNRITRKPPCTRKPGIRESPGTRPRIPAVRPPA WRDRQADRRQRRASSSSPTAPAQREGGSLARHEAETRRARERQAERRPAEAERRAVGWMERGAADHGEPPPTNHL CLSLSLSICVSLSLSLARCHHLLLSASTVSRACLSRPSGRQLCWP* |
| Coding | >Hirsu2|2087 ATGTACGTCGTCGGCCTCTGTCCTGGTGCCGCCTTGGCCCACGACGGGGCGCCGACGATCCGTACGACGAGGGCC GTCCGTCGACGCCGTCCCATCGCACCGCCCGGCCCCAGGCCCATGTCCATGGCAGCCGCCGCCCGCCAGGCTGCG CTGCGCTGCCTCGAGACCCTGGCCAGACCGGGCCTTCGGGAAAGCGGCGGCGTCTGTCTTTCGCGGGCGGAGGCC AACGATGATAGGGCCCTGAACGAGCAGAGAGAGAGAGCCCTGGGAGCCTTGGGGTCGCTGCAAAACCCCCGAGGC CCCACCCCCCACCTATCCGGGAGCCTTGCCGTATCGGTATGGCGGGGTACGCGGCTGGGTACTTCGCGCAAGGCG GACACTGCCCTGGAGAGCAAGTACCGGCCTGCAGATGGGTACCTGGACGCCGCTGACTGGCCGCGGCCGCCCGGC TGCCGCATCCGGCGACGAGGCGCGCTGACAAACCCGACGGCCGCCGCTCTCGCTCTCACCATCCATCATCATCAT CGGCCTCACTCGCACGTGTCTGGATACGGCAAGTCCATGGACGGATGTGTCTGCATGCGATCTCGCTCTGGCGTC ACCACCATCCTCGGCCGTCGCACGCTGCCTCAAGGCACCCACACAGCCAAGGGCCCAAAACAGCGAGAGAGAGAG AGAGAGAGGCGGCAAGACCCTGGACGGCGGCCCGACCGGGATACCCCCGGCCGACCTCAGGCAATATTTTATTTT TGTTCGGGCGCCATGTCTTCGCGGCTGCAATGTGCAAATGGGACGAGTGACAGAAATCGCATCACGCGCAAGCCG CCCTGCACGCGCAAGCCGGGTATTCGGGAAAGCCCTGGAACCCGTCCACGCATACCGGCTGTCCGTCCGCCTGCC TGGCGAGACAGACAGGCGGACAGGCGGCAGAGGAGGGCATCATCGTCCTCGCCCACCGCCCCGGCTCAACGTGAG GGAGGCTCGCTCGCGAGACACGAGGCCGAGACTCGAAGAGCAAGGGAGAGGCAAGCAGAGCGACGGCCGGCCGAG GCAGAGAGAAGAGCGGTTGGGTGGATGGAACGCGGCGCTGCTGACCACGGCGAGCCACCACCCACGAATCACCTC TGTCTCTCTCTCTCTCTCTCCATCTGTGTCTCTCTGTCTCTCTCTCTCGCTCGCTGCCACCATCTCCTCCTCTCT GCGTCCACTGTCTCTCGTGCCTGTCTGTCTCGCCCGTCCGGCCGTCAGCTCTGCTGGCCCTAG |
| Transcript | >Hirsu2|2087 ATGTACGTCGTCGGCCTCTGTCCTGGTGCCGCCTTGGCCCACGACGGGGCGCCGACGATCCGTACGACGAGGGCC GTCCGTCGACGCCGTCCCATCGCACCGCCCGGCCCCAGGCCCATGTCCATGGCAGCCGCCGCCCGCCAGGCTGCG CTGCGCTGCCTCGAGACCCTGGCCAGACCGGGCCTTCGGGAAAGCGGCGGCGTCTGTCTTTCGCGGGCGGAGGCC AACGATGATAGGGCCCTGAACGAGCAGAGAGAGAGAGCCCTGGGAGCCTTGGGGTCGCTGCAAAACCCCCGAGGC CCCACCCCCCACCTATCCGGGAGCCTTGCCGTATCGGTATGGCGGGGTACGCGGCTGGGTACTTCGCGCAAGGCG GACACTGCCCTGGAGAGCAAGTACCGGCCTGCAGATGGGTACCTGGACGCCGCTGACTGGCCGCGGCCGCCCGGC TGCCGCATCCGGCGACGAGGCGCGCTGACAAACCCGACGGCCGCCGCTCTCGCTCTCACCATCCATCATCATCAT CGGCCTCACTCGCACGTGTCTGGATACGGCAAGTCCATGGACGGATGTGTCTGCATGCGATCTCGCTCTGGCGTC ACCACCATCCTCGGCCGTCGCACGCTGCCTCAAGGCACCCACACAGCCAAGGGCCCAAAACAGCGAGAGAGAGAG AGAGAGAGGCGGCAAGACCCTGGACGGCGGCCCGACCGGGATACCCCCGGCCGACCTCAGGCAATATTTTATTTT TGTTCGGGCGCCATGTCTTCGCGGCTGCAATGTGCAAATGGGACGAGTGACAGAAATCGCATCACGCGCAAGCCG CCCTGCACGCGCAAGCCGGGTATTCGGGAAAGCCCTGGAACCCGTCCACGCATACCGGCTGTCCGTCCGCCTGCC TGGCGAGACAGACAGGCGGACAGGCGGCAGAGGAGGGCATCATCGTCCTCGCCCACCGCCCCGGCTCAACGTGAG GGAGGCTCGCTCGCGAGACACGAGGCCGAGACTCGAAGAGCAAGGGAGAGGCAAGCAGAGCGACGGCCGGCCGAG GCAGAGAGAAGAGCGGTTGGGTGGATGGAACGCGGCGCTGCTGACCACGGCGAGCCACCACCCACGAATCACCTC TGTCTCTCTCTCTCTCTCTCCATCTGTGTCTCTCTGTCTCTCTCTCTCGCTCGCTGCCACCATCTCCTCCTCTCT GCGTCCACTGTCTCTCGTGCCTGTCTGTCTCGCCCGTCCGGCCGTCAGCTCTGCTGGCCCTAG |
| Gene | >Hirsu2|2087 ATGTACGTCGTCGGCCTCTGTCCTGGTGCCGCCTTGGCCCACGACGGGGCGCCGACGATCCGTACGACGAGGGCC GTCCGTCGACGCCGTCCCATCGCACCGCCCGGCCCCAGGCCCATGTCCATGGCAGCCGCCGCCCGCCAGGCTGCG CTGCGCTGCCTCGAGACCCTGGCCAGACCGGGCCTTCGGGAAAGCGGCGGCGTCTGTCTTTCGGTACGCGGAATG AGAGGGAGCTCGAGCTGTAGCGAGAGAGCGGGCGGAGGCCAACGATGATAGGGCCCTGAACGAGCAGAGAGAGAG AGCCCTGGGAGCCTTGGGGTCGCTGCAAAACCCCCGAGGCCCCACCCCCCACCTATCCGGGAGCCTTGCCGTATC GGTATGGCGGGGTACGCGGCTGGGTACTTCGCGCAAGGCGGACACTGCCCTGGAGAGCAAGTACCGGCCTGCAGA TGGGTACCTGGACGCCGCTGACTGGCCGCGGCCGCCCGGCTGCCGCATCCGGCGACGAGGCGCGCTGACAAACCC GACGGCCGCCGCTCTCGCTCTCACCATCCATCATCATCATCGGCCTCACTCGCACGTGTCTGGATACGGCAAGTC CATGGACGGATGTGTCTGCATGCGATCTCGCTCTGGCGTCACCACCATCCTCGGCCGTCGCACGCTGCCTCAAGG CACCCACACAGCCAAGGGCCCAAAACAGCGAGAGAGAGAGAGAGAGAGGCGGCAAGACCCTGGACGGCGGCCCGA CCGGGATACCCCCGGCCGACCTCAGGCAATATTTTATTTTTGTTCGGGCGCCATGTCTTCGCGGCTGCAATGTGC AAATGGGACGAGTGACAGAAATCGCATCACGCGCAAGCCGCCCTGCACGCGCAAGCCGGGTATTCGGGAAAGCCC TGGAACCCGTCCACGCATACCGGCTGTCCGTCCGCCTGCCTGGCGAGACAGACAGGCGGACAGGCGGCAGAGGAG GGCATCATCGTCCTCGCCCACCGCCCCGGCTCAACGTGAGGGAGGCTCGCTCGCGAGACACGAGGCCGAGACTCG AAGAGCAAGGGAGAGGCAAGCAGAGCGACGGCCGGCCGAGGCAGAGAGAAGAGCGGTTGGGTGGATGGAACGCGG CGCTGCTGACCACGGCGAGCCACCACCCACGAATCACCTCTGTCTCTCTCTCTCTCTCTCCATCTGTGTCTCTCT GTCTCTCTCTCTCGCTCGCTGCCACCATCTCCTCCTCTCTGCGTCCACTGTCTCTCGTGCCTGTCTGTCTCGCCC GTCCGGCCGTCAGCTCTGCTGGCCCTAG |