Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2082
Gene name
LocationContig_1487:3197..3455
Strand+
Gene length (bp)258
Transcript length (bp)258
Coding sequence length (bp)258
Protein length (aa) 86

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm Nuclear localization signal 0.7582 0.4559 0.0511 0.1635 0.2522 0.0142 0.1176 0.1841 0.3559 0.0137

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4970
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|332
Ophiocordyceps australis map64 (Brazil) OphauB2|5313
Ophiocordyceps camponoti-floridani Ophcf2|02050
Ophiocordyceps camponoti-floridani Ophcf2|07439
Ophiocordyceps camponoti-rufipedis Ophun1|7012
Ophiocordyceps subramaniannii Hirsu2|2082 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2082
MDAPVSSPMHTRTSSSAAWSTQQSPANAAAVPVQPRPPPPAPAQQQQQPSPSTDALLKDFSLVAEAAKRAQVAVM
VRDFESCGIS*
Coding >Hirsu2|2082
ATGGACGCGCCCGTCTCGTCGCCCATGCACACCCGCACCTCGTCGTCGGCCGCCTGGTCGACGCAGCAGTCGCCC
GCCAACGCCGCCGCCGTCCCCGTCCAGCCTCGCCCGCCGCCGCCCGCGCCGGCCCAGCAGCAGCAGCAGCCGTCG
CCGTCGACCGACGCCCTGCTCAAGGACTTCAGCCTCGTCGCCGAGGCCGCCAAGCGCGCCCAGGTCGCCGTCATG
GTCCGCGACTTTGAGAGCTGCGGCATCTCGTAG
Transcript >Hirsu2|2082
ATGGACGCGCCCGTCTCGTCGCCCATGCACACCCGCACCTCGTCGTCGGCCGCCTGGTCGACGCAGCAGTCGCCC
GCCAACGCCGCCGCCGTCCCCGTCCAGCCTCGCCCGCCGCCGCCCGCGCCGGCCCAGCAGCAGCAGCAGCCGTCG
CCGTCGACCGACGCCCTGCTCAAGGACTTCAGCCTCGTCGCCGAGGCCGCCAAGCGCGCCCAGGTCGCCGTCATG
GTCCGCGACTTTGAGAGCTGCGGCATCTCGTAG
Gene >Hirsu2|2082
ATGGACGCGCCCGTCTCGTCGCCCATGCACACCCGCACCTCGTCGTCGGCCGCCTGGTCGACGCAGCAGTCGCCC
GCCAACGCCGCCGCCGTCCCCGTCCAGCCTCGCCCGCCGCCGCCCGCGCCGGCCCAGCAGCAGCAGCAGCCGTCG
CCGTCGACCGACGCCCTGCTCAAGGACTTCAGCCTCGTCGCCGAGGCCGCCAAGCGCGCCCAGGTCGCCGTCATG
GTCCGCGACTTTGAGAGCTGCGGCATCTCGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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