© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2081 |
| Gene name | |
| Location | Contig_1487:57..1479 |
| Strand | - |
| Gene length (bp) | 1422 |
| Transcript length (bp) | 1293 |
| Coding sequence length (bp) | 1293 |
| Protein length (aa) | 431 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus|Extracellular | 0.5083 | 0.6121 | 0.6887 | 0.0511 | 0.2039 | 0.0356 | 0.1333 | 0.061 | 0.165 | 0.0136 |
| Orthofinder run ID | 4 |
| Orthogroup | 8976 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|2081 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2081 MRHATLRHGTHTRASRHLIVRPCASLRDGETALRTMTLQLAAKGPMSTRCSRTCTRSEPRGVCRVSALPAPPAGP GLASAPPFREPPGGRFASQALAMPRAAPLRPRIVPVGAPAGRSSGHARARKTRAQGRHKRRRAKQAESVEYIQRP APSCQKLDGKSPIFFLAVGQISQISSRSSPAPSSLPPTGPSCCGRQERRDALPASTAPNRTDDDDKERNIVRPST TPPALACPRHQAPRAPAAHALMLLRGDELDVWPNRSRPFPRPAPRRQAATRCQTRRTAPRNRIRKAGHHLRLEQL DGPEEREQLWQKRNLLGRPLRRLHLSRPHAVANCLLPAEASLGLRTARDAQLSPSWLAAEAAQQRRLPHAPHPSR RPPFSCMDSAASWTALPPPRFLCAYPSRRLHFSAARGPRPQSRHWSFATSVPPFA* |
| Coding | >Hirsu2|2081 ATGCGGCATGCGACGCTGCGGCACGGCACACACACGCGCGCGAGCCGACACCTGATCGTCCGCCCCTGCGCATCG CTCCGGGACGGGGAGACGGCTCTCCGCACCATGACGTTGCAACTTGCGGCCAAGGGGCCGATGTCTACTCGGTGC AGCCGTACGTGCACACGGAGCGAGCCGAGGGGTGTCTGCCGAGTCTCGGCCCTCCCAGCGCCGCCGGCGGGCCCC GGCCTCGCCTCGGCGCCACCCTTCCGAGAGCCGCCGGGCGGCCGCTTCGCTAGTCAGGCCCTGGCTATGCCCCGC GCGGCGCCGCTCCGGCCCAGGATCGTCCCTGTCGGGGCGCCGGCCGGCCGGTCCAGCGGCCACGCACGTGCACGC AAAACACGCGCACAAGGACGACACAAGCGCCGACGTGCCAAGCAAGCCGAGTCGGTCGAGTACATTCAGAGGCCA GCCCCTTCGTGCCAAAAGCTGGACGGCAAGAGTCCCATCTTTTTTCTCGCTGTCGGCCAAATTAGCCAAATTAGC TCTCGGTCTTCCCCGGCGCCTTCCTCCTTGCCGCCAACGGGGCCGTCATGCTGTGGGCGGCAGGAGCGCCGGGAC GCCCTGCCGGCATCGACGGCCCCGAACCGCACGGATGACGACGACAAGGAACGGAACATCGTCCGCCCCTCGACG ACGCCGCCGGCTCTGGCGTGCCCCAGGCATCAAGCGCCTCGTGCGCCGGCCGCTCATGCGCTCATGCTCCTCCGG GGGGACGAGCTTGACGTCTGGCCAAACAGAAGCCGGCCTTTCCCTCGGCCTGCGCCGCGACGCCAAGCCGCGACG CGCTGCCAAACGCGTCGGACCGCTCCTCGGAACCGGATTCGCAAGGCGGGCCACCACCTGAGGCTGGAACAGCTC GACGGTCCCGAGGAAAGGGAGCAACTATGGCAGAAAAGAAATCTCCTCGGCCGCCCGCTTCGTCGTCTGCACTTG TCCCGCCCGCACGCTGTTGCCAACTGTCTGTTGCCCGCGGAAGCGAGTCTCGGCCTCCGGACCGCAAGGGACGCG CAACTTTCCCCGTCATGGCTCGCGGCAGAGGCTGCGCAACAAAGACGCCTCCCCCATGCGCCGCATCCAAGCCGC CGGCCGCCCTTCTCCTGCATGGACTCGGCGGCGTCCTGGACCGCCCTGCCTCCTCCGCGCTTCCTTTGCGCCTAC CCATCTCGCCGGCTTCACTTCAGCGCGGCTCGAGGCCCAAGGCCTCAATCTCGCCACTGGTCCTTTGCGACGTCT GTGCCCCCCTTCGCATGA |
| Transcript | >Hirsu2|2081 ATGCGGCATGCGACGCTGCGGCACGGCACACACACGCGCGCGAGCCGACACCTGATCGTCCGCCCCTGCGCATCG CTCCGGGACGGGGAGACGGCTCTCCGCACCATGACGTTGCAACTTGCGGCCAAGGGGCCGATGTCTACTCGGTGC AGCCGTACGTGCACACGGAGCGAGCCGAGGGGTGTCTGCCGAGTCTCGGCCCTCCCAGCGCCGCCGGCGGGCCCC GGCCTCGCCTCGGCGCCACCCTTCCGAGAGCCGCCGGGCGGCCGCTTCGCTAGTCAGGCCCTGGCTATGCCCCGC GCGGCGCCGCTCCGGCCCAGGATCGTCCCTGTCGGGGCGCCGGCCGGCCGGTCCAGCGGCCACGCACGTGCACGC AAAACACGCGCACAAGGACGACACAAGCGCCGACGTGCCAAGCAAGCCGAGTCGGTCGAGTACATTCAGAGGCCA GCCCCTTCGTGCCAAAAGCTGGACGGCAAGAGTCCCATCTTTTTTCTCGCTGTCGGCCAAATTAGCCAAATTAGC TCTCGGTCTTCCCCGGCGCCTTCCTCCTTGCCGCCAACGGGGCCGTCATGCTGTGGGCGGCAGGAGCGCCGGGAC GCCCTGCCGGCATCGACGGCCCCGAACCGCACGGATGACGACGACAAGGAACGGAACATCGTCCGCCCCTCGACG ACGCCGCCGGCTCTGGCGTGCCCCAGGCATCAAGCGCCTCGTGCGCCGGCCGCTCATGCGCTCATGCTCCTCCGG GGGGACGAGCTTGACGTCTGGCCAAACAGAAGCCGGCCTTTCCCTCGGCCTGCGCCGCGACGCCAAGCCGCGACG CGCTGCCAAACGCGTCGGACCGCTCCTCGGAACCGGATTCGCAAGGCGGGCCACCACCTGAGGCTGGAACAGCTC GACGGTCCCGAGGAAAGGGAGCAACTATGGCAGAAAAGAAATCTCCTCGGCCGCCCGCTTCGTCGTCTGCACTTG TCCCGCCCGCACGCTGTTGCCAACTGTCTGTTGCCCGCGGAAGCGAGTCTCGGCCTCCGGACCGCAAGGGACGCG CAACTTTCCCCGTCATGGCTCGCGGCAGAGGCTGCGCAACAAAGACGCCTCCCCCATGCGCCGCATCCAAGCCGC CGGCCGCCCTTCTCCTGCATGGACTCGGCGGCGTCCTGGACCGCCCTGCCTCCTCCGCGCTTCCTTTGCGCCTAC CCATCTCGCCGGCTTCACTTCAGCGCGGCTCGAGGCCCAAGGCCTCAATCTCGCCACTGGTCCTTTGCGACGTCT GTGCCCCCCTTCGCATGA |
| Gene | >Hirsu2|2081 ATGCGGCATGCGACGCTGCGGCACGGCACACACACGCGCGCGAGCCGACACCTGATCGTCCGCCCCTGCGCATCG CTCCGGGACGGGGAGACGGCTCTCCGCACCATGACGTTGCAACTTGCGGCCAAGGGGCCGATGTCTACTCGGTGC AGCCGTACGTGCACACGGAGCGAGCCGAGGGGTGTCTGCCGAGTCTCGGCCCTCCCAGCGCCGCCGGCGGGCCCC GGCCTCGCCTCGGCGCCACCCTTCCGAGAGCCGCCGGGCGGCCGCTTCGCTAGTCAGGCCCTGGCTATGCCCCGC GCGGCGCCGCTCCGGCCCAGGATCGTCCCTGTCGGGGCGCCGGCCGGCCGGTCCAGCGGCCACGCACGTGCACGC AAAACACGCGCACAAGGACGACACAAGCGCCGACGTGCCAAGCAAGCCGAGTCGGTCGAGTACATTCAGAGGCCA GCCCCTTCGTGCCAAAAGCTGGACGGCAAGAGTCCCATCTTTTTTCTCGCTGTCGGCCAAATTAGCCAAATTAGC TCTCGGTCTTCCCCGGCGCCTTCCTCCTTGCCGCCAACGGGGCCGTCATGCTGTGGGCGGCAGGAGCGCCGGTAC GCGAGGAAGGCACACAGCTCTCGTCACCTCTCGTGACTTTTTTTTTTCTTACCTGGAGCCCAAGCATCATGCCTC TTCTTCTGCCTGTCGGCCGGCTTCGCGTCTCCCTCATGCCGCCGGACCAGGGACGCCCTGCCGGCATCGACGGCC CCGAACCGCACGGATGACGACGACAAGGAACGGAACATCGTCCGCCCCTCGACGACGCCGCCGGCTCTGGCGTGC CCCAGGCATCAAGCGCCTCGTGCGCCGGCCGCTCATGCGCTCATGCTCCTCCGGGGGGACGAGCTTGACGTCTGG CCAAACAGAAGCCGGCCTTTCCCTCGGCCTGCGCCGCGACGCCAAGCCGCGACGCGCTGCCAAACGCGTCGGACC GCTCCTCGGAACCGGATTCGCAAGGCGGGCCACCACCTGAGGCTGGAACAGCTCGACGGTCCCGAGGAAAGGGAG CAACTATGGCAGAAAAGAAATCTCCTCGGCCGCCCGCTTCGTCGTCTGCACTTGTCCCGCCCGCACGCTGTTGCC AACTGTCTGTTGCCCGCGGAAGCGAGTCTCGGCCTCCGGACCGCAAGGGACGCGCAACTTTCCCCGTCATGGCTC GCGGCAGAGGCTGCGCAACAAAGACGCCTCCCCCATGCGCCGCATCCAAGCCGCCGGCCGCCCTTCTCCTGCATG GACTCGGCGGCGTCCTGGACCGCCCTGCCTCCTCCGCGCTTCCTTTGCGCCTACCCATCTCGCCGGCTTCACTTC AGCGCGGCTCGAGGCCCAAGGCCTCAATCTCGCCACTGGTCCTTTGCGACGTCTGTGCCCCCCTTCGCATGA |