Protein ID | Hirsu2|2080 |
Gene name | |
Location | Contig_1486:6164..6395 |
Strand | - |
Gene length (bp) | 231 |
Transcript length (bp) | 231 |
Coding sequence length (bp) | 231 |
Protein length (aa) | 77 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF17104 | DUF5102 | Domain of unknown function (DUF5102) | 3.6E-34 | 1 | 76 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O42882|YFQ5_SCHPO | Uncharacterized protein C8E11.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC8E11.05c PE=4 SV=1 | 1 | 75 | 3.0E-10 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | Nuclear localization signal | 0.6293 | 0.4616 | 0.3048 | 0.1262 | 0.1784 | 0.0276 | 0.0391 | 0.0733 | 0.0961 | 0.0133 |
Orthofinder run ID | 4 |
Orthogroup | 1943 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2080 LDLVAARYLCSTTDEALGGMTDQELRQHVAKLESMQDAAKELLEYWQKRTDEKIGDREAFEGVIENLVKHARKVR K* |
Coding | >Hirsu2|2080 CTGGACCTCGTGGCCGCGCGCTACCTCTGCAGCACGACGGACGAGGCGCTCGGCGGCATGACCGACCAGGAGCTC AGGCAGCACGTGGCCAAGCTGGAGTCGATGCAGGACGCGGCCAAGGAGCTGCTCGAGTACTGGCAGAAGCGGACC GACGAGAAGATCGGCGACCGCGAGGCCTTCGAGGGCGTGATAGAGAACCTCGTCAAGCACGCGCGCAAGGTGCGC AAATAG |
Transcript | >Hirsu2|2080 CTGGACCTCGTGGCCGCGCGCTACCTCTGCAGCACGACGGACGAGGCGCTCGGCGGCATGACCGACCAGGAGCTC AGGCAGCACGTGGCCAAGCTGGAGTCGATGCAGGACGCGGCCAAGGAGCTGCTCGAGTACTGGCAGAAGCGGACC GACGAGAAGATCGGCGACCGCGAGGCCTTCGAGGGCGTGATAGAGAACCTCGTCAAGCACGCGCGCAAGGTGCGC AAATAG |
Gene | >Hirsu2|2080 CTGGACCTCGTGGCCGCGCGCTACCTCTGCAGCACGACGGACGAGGCGCTCGGCGGCATGACCGACCAGGAGCTC AGGCAGCACGTGGCCAAGCTGGAGTCGATGCAGGACGCGGCCAAGGAGCTGCTCGAGTACTGGCAGAAGCGGACC GACGAGAAGATCGGCGACCGCGAGGCCTTCGAGGGCGTGATAGAGAACCTCGTCAAGCACGCGCGCAAGGTGCGC AAATAG |