Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2078
Gene name
LocationContig_1486:1..1383
Strand-
Gene length (bp)1382
Transcript length (bp)1143
Coding sequence length (bp)1143
Protein length (aa) 381

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cell membrane Signal peptide|Transmembrane domain 0.158 0.16 0.0796 0.6474 0.0595 0.0023 0.0931 0.5647 0.2082 0.008

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 153 175 22
2 206 228 22
3 241 263 22
4 304 326 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1940
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6088
Ophiocordyceps australis map64 (Brazil) OphauB2|7658
Ophiocordyceps camponoti-floridani Ophcf2|00402
Ophiocordyceps camponoti-rufipedis Ophun1|3974
Ophiocordyceps kimflemingae Ophio5|6344
Ophiocordyceps subramaniannii Hirsu2|2078 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2078
MAAQGPDDKKRPAALNLTPARSISDSSTSTDSLKVPRTPRFAEATSVHSPVDMRSPFADPDQSQVAQSQPGDIGF
GYIGSTNQLNRESVAVPATPRSPLKSALKVPGTPARQFSNPLSPTFREEDLLEKRESSTEKEQVRDVKMKTRVRM
AKFALRGVSFSCSLIILSMLSASFAIFNATKSLPSQSGMPSWAPNTASKSWPQKLALAMACLSLFVCICVFLAYC
RGGHKRAEKVNTYYQTFAVGWFITSLILWVVTAAIFQHARDHSNNKDMWGWACVDNTRSDVFMQKVDYQLVCRLQ
NWSLVCIIIEIVIEVISIALYSIVFWRYYTKRRLFKSMDLRDRARSDLYLAQLRSQSAPNTPGYAGPKSPALSHY
AIPAP*
Coding >Hirsu2|2078
ATGGCCGCCCAAGGCCCGGATGACAAGAAGCGGCCGGCTGCCCTCAATTTGACTCCGGCCCGGTCCATCTCGGAT
TCGTCCACGTCCACCGACTCCCTCAAGGTTCCTCGTACGCCTCGCTTCGCCGAGGCCACCTCTGTCCATTCTCCC
GTCGACATGAGGTCTCCATTTGCAGACCCCGACCAGTCTCAGGTTGCCCAGTCGCAGCCGGGTGACATCGGCTTT
GGCTACATCGGAAGCACCAACCAGCTCAACCGTGAATCCGTCGCCGTCCCAGCCACCCCCCGCTCGCCTCTCAAG
AGCGCCTTGAAGGTGCCTGGGACCCCGGCAAGACAGTTTTCGAATCCCCTCAGCCCGACCTTCCGTGAGGAGGAT
CTTCTGGAAAAGCGGGAGAGTTCTACGGAGAAGGAGCAAGTACGCGATGTTAAAATGAAGACGCGCGTGCGCATG
GCCAAGTTTGCTCTTCGCGGCGTCAGCTTCAGCTGCTCCCTCATCATCCTCTCCATGCTTTCCGCCTCCTTCGCC
ATCTTCAACGCCACCAAGAGCCTGCCCAGCCAGAGCGGCATGCCGTCCTGGGCCCCCAACACCGCCTCCAAGTCC
TGGCCCCAGAAGCTTGCCCTGGCCATGGCCTGCCTCTCCCTCTTCGTCTGCATCTGCGTCTTCCTCGCCTACTGC
CGCGGCGGGCACAAGCGGGCAGAAAAGGTCAACACCTACTACCAGACCTTTGCCGTCGGCTGGTTCATCACGAGC
CTCATCCTCTGGGTCGTCACCGCCGCCATCTTCCAGCATGCGCGCGACCACAGCAACAACAAGGACATGTGGGGC
TGGGCCTGCGTCGACAACACCCGGTCCGACGTCTTCATGCAAAAGGTCGACTACCAGCTCGTCTGCCGCCTGCAG
AACTGGTCGCTCGTGTGCATCATCATCGAGATCGTCATCGAGGTCATCTCCATCGCCCTCTACAGCATCGTCTTC
TGGCGCTACTACACCAAGCGCCGCCTCTTCAAGTCGATGGACCTGCGCGACCGCGCCCGCTCCGACCTCTACCTC
GCCCAGCTGCGCTCCCAGTCGGCCCCCAACACCCCCGGCTACGCCGGCCCCAAGTCCCCGGCCCTGAGCCACTAC
GCCATTCCAGCCCCCTGA
Transcript >Hirsu2|2078
ATGGCCGCCCAAGGCCCGGATGACAAGAAGCGGCCGGCTGCCCTCAATTTGACTCCGGCCCGGTCCATCTCGGAT
TCGTCCACGTCCACCGACTCCCTCAAGGTTCCTCGTACGCCTCGCTTCGCCGAGGCCACCTCTGTCCATTCTCCC
GTCGACATGAGGTCTCCATTTGCAGACCCCGACCAGTCTCAGGTTGCCCAGTCGCAGCCGGGTGACATCGGCTTT
GGCTACATCGGAAGCACCAACCAGCTCAACCGTGAATCCGTCGCCGTCCCAGCCACCCCCCGCTCGCCTCTCAAG
AGCGCCTTGAAGGTGCCTGGGACCCCGGCAAGACAGTTTTCGAATCCCCTCAGCCCGACCTTCCGTGAGGAGGAT
CTTCTGGAAAAGCGGGAGAGTTCTACGGAGAAGGAGCAAGTACGCGATGTTAAAATGAAGACGCGCGTGCGCATG
GCCAAGTTTGCTCTTCGCGGCGTCAGCTTCAGCTGCTCCCTCATCATCCTCTCCATGCTTTCCGCCTCCTTCGCC
ATCTTCAACGCCACCAAGAGCCTGCCCAGCCAGAGCGGCATGCCGTCCTGGGCCCCCAACACCGCCTCCAAGTCC
TGGCCCCAGAAGCTTGCCCTGGCCATGGCCTGCCTCTCCCTCTTCGTCTGCATCTGCGTCTTCCTCGCCTACTGC
CGCGGCGGGCACAAGCGGGCAGAAAAGGTCAACACCTACTACCAGACCTTTGCCGTCGGCTGGTTCATCACGAGC
CTCATCCTCTGGGTCGTCACCGCCGCCATCTTCCAGCATGCGCGCGACCACAGCAACAACAAGGACATGTGGGGC
TGGGCCTGCGTCGACAACACCCGGTCCGACGTCTTCATGCAAAAGGTCGACTACCAGCTCGTCTGCCGCCTGCAG
AACTGGTCGCTCGTGTGCATCATCATCGAGATCGTCATCGAGGTCATCTCCATCGCCCTCTACAGCATCGTCTTC
TGGCGCTACTACACCAAGCGCCGCCTCTTCAAGTCGATGGACCTGCGCGACCGCGCCCGCTCCGACCTCTACCTC
GCCCAGCTGCGCTCCCAGTCGGCCCCCAACACCCCCGGCTACGCCGGCCCCAAGTCCCCGGCCCTGAGCCACTAC
GCCATTCCAGCCCCCTGA
Gene >Hirsu2|2078
ATGGCCGCCCAAGGTCCGTCTCTATCTGGCCTCTCCCTTACTCACCTTGACTGGTCGTCCTAACTCGCCCCCCAA
TAGGCCCGGATGACAAGAAGCGGCCGGCTGCCCTCAATTTGACTCCGGCCCGGTCCATCTCGGATTCGTCCACGT
CCACCGACTCCCTCAAGGTTCCTCGTACGCCTCGCTTCGCCGAGGCCACCTCTGTCCATTCTCCCGTCGACATGA
GGTCTCCATTTGCAGACCCCGACCAGTCTCAGGTTGCCCAGTCGCAGCCGGGTGACATCGGCTTTGGCTACATCG
GAAGCACCAACCAGCTCAACCGTGAATCCGTCGCCGTCCCAGCCACCCCCCGCTCGCCTCTCAAGAGCGCCTTGA
AGGTGCCTGGGACCCCGGCAAGACAGTTTTCGAATCCCCTCAGCCCGACCTTCCGTGAGGAGGATCTTCTGGAAA
AGCGGGAGAGTTCTACGGAGAAGGAGCAAGTACGCGATGTTGTAAGTCAAAGCCCATTGCTGCGCGCCAACCGGT
CGTCGCCTAACCCGCTCTCCAGAAAATGAAGACGCGCGTGCGCATGGCCAAGTTTGCTCTTCGCGGCGTCAGCTT
CAGCTGCTCCCTCATCATCCTCTCCATGCTTTCCGCCTCCTTCGCCATCTTCAACGCCACCAAGAGCCTGCCCAG
CCAGAGCGGCATGCCGTCCTGGGCCCCCAACACCGCCTCCAAGTCCTGGCCCCAGAAGCTTGCCCTGGCCATGGC
CTGCCTCTCCCTCTTCGTCTGCATCTGCGTCTTCCTCGCCTACTGCCGCGGCGGGCACAAGCGGGCAGAAAAGGT
CAACACCTACTACCAGACCTTTGCCGTCGGCTGGGTGAGTCGCCGCCCGCCCGTCCCTCGTCGCCAATTGGCGGA
CCCTCTTACTGACCAGCGACGCCAGTTCATCACGAGCCTCATCCTCTGGGTCGTCACCGCCGCCATCTTCCAGCA
TGCGCGCGACCACAGCAACAACAAGGACATGTGGGGCTGGGCCTGCGTCGACAACACCCGGTCCGACGTCTTCAT
GCAAAAGGTCGACTACCAGCTCGTCTGCCGCCTGCAGAACTGGTCGCTCGTGTGCATCATCATCGAGATCGTCAT
CGAGGTCATCTCCATCGCCCTCTACAGCATCGTCTTCTGGCGCTACTACACCAAGCGCCGCCTCTTCAAGTCGAT
GGACCTGCGCGACCGCGCCCGCTCCGACCTCTACCTCGCCCAGCTGCGCTCCCAGTCGGCCCCCAACACCCCCGG
CTACGCCGGCCCCAAGTCCCCGGCCCTGAGCCACTACGCCATGTCTCCCCGCCACCCCCCGGCCGCCTACCGCAA
CCTGTCCGACATCGCCGAGTCCAGCCCCCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail