Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2074
Gene name
LocationContig_1484:5976..6392
Strand-
Gene length (bp)416
Transcript length (bp)369
Coding sequence length (bp)369
Protein length (aa) 123

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cell membrane 0.1991 0.0746 0.3607 0.6936 0.1131 0.0229 0.3582 0.3229 0.2661 0.0185

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup147
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7960
Ophiocordyceps australis map64 (Brazil) OphauB2|840
Ophiocordyceps camponoti-floridani Ophcf2|02656
Ophiocordyceps camponoti-floridani Ophcf2|06464
Ophiocordyceps camponoti-rufipedis Ophun1|4164
Ophiocordyceps camponoti-rufipedis Ophun1|6322
Ophiocordyceps kimflemingae Ophio5|1791
Ophiocordyceps kimflemingae Ophio5|2231
Ophiocordyceps kimflemingae Ophio5|447
Ophiocordyceps subramaniannii Hirsu2|10000
Ophiocordyceps subramaniannii Hirsu2|2074 (this protein)
Ophiocordyceps subramaniannii Hirsu2|389

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2074
LAARLPAKRVLVLAARLPAKRVPVPAKGEECAKVCSDKYNECRGKPEANRSTCASAYSDCLGFSPFGPDGSLVTP
TACAPGKEGGKGYPGAGGEQPVVVTAGAEGSSRPVMALLALAALALL*
Coding >Hirsu2|2074
CTGGCGGCGAGGCTCCCGGCAAAGAGGGTCCTGGTGCTGGCGGCGAGGCTCCCGGCAAAGAGGGTCCCGGTGCCG
GCGAAGGGCGAGGAGTGCGCCAAGGTGTGCAGCGACAAGTACAACGAGTGCCGCGGCAAGCCGGAGGCGAACCGG
TCGACGTGCGCGTCGGCCTACTCGGACTGCCTGGGCTTCAGCCCCTTCGGCCCCGACGGCTCGCTCGTGACGCCG
ACGGCCTGCGCGCCCGGCAAGGAGGGCGGCAAGGGCTACCCCGGCGCGGGCGGCGAGCAGCCGGTGGTGGTGACG
GCCGGAGCCGAGGGCAGCAGCCGGCCTGTCATGGCGCTCCTGGCGCTCGCGGCCCTGGCGCTGCTATAG
Transcript >Hirsu2|2074
CTGGCGGCGAGGCTCCCGGCAAAGAGGGTCCTGGTGCTGGCGGCGAGGCTCCCGGCAAAGAGGGTCCCGGTGCCG
GCGAAGGGCGAGGAGTGCGCCAAGGTGTGCAGCGACAAGTACAACGAGTGCCGCGGCAAGCCGGAGGCGAACCGG
TCGACGTGCGCGTCGGCCTACTCGGACTGCCTGGGCTTCAGCCCCTTCGGCCCCGACGGCTCGCTCGTGACGCCG
ACGGCCTGCGCGCCCGGCAAGGAGGGCGGCAAGGGCTACCCCGGCGCGGGCGGCGAGCAGCCGGTGGTGGTGACG
GCCGGAGCCGAGGGCAGCAGCCGGCCTGTCATGGCGCTCCTGGCGCTCGCGGCCCTGGCGCTGCTATAG
Gene >Hirsu2|2074
CTGGCGGCGAGGCTCCCGGCAAAGAGGGTCCTGGTGCTGGCGGCGAGGCTCCCGGCAAAGAGGGTCCCGGTGCCG
GCGGTGAGGCCCCCGGCAAGGAGGGACCCGGAGCTGGCGCTGGCGACAAGAAGGGCGAGGAGTGCGCCAAGGTGT
GCAGCGACAAGTACAACGAGTGCCGCGGCAAGCCGGAGGCGAACCGGTCGACGTGCGCGTCGGCCTACTCGGACT
GCCTGGGCTTCAGCCCCTTCGGCCCCGACGGCTCGCTCGTGACGCCGACGGCCTGCGCGCCCGGCAAGGAGGGCG
GCAAGGGCTACCCCGGCGCGGGCGGCGAGCAGCCGGTGGTGGTGACGGCCGGAGCCGAGGGCAGCAGCCGGCCTG
TCATGGCGCTCCTGGCGCTCGCGGCCCTGGCGCTGCTATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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