Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2063
Gene name
LocationContig_148:32860..33664
Strand+
Gene length (bp)804
Transcript length (bp)717
Coding sequence length (bp)717
Protein length (aa) 239

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05773 RWD RWD domain 3.1E-22 4 121
PF16543 DFRP_C DRG Family Regulatory Proteins, Tma46 9.2E-08 139 222

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9H446|RWDD1_HUMAN RWD domain-containing protein 1 OS=Homo sapiens GN=RWDD1 PE=1 SV=1 4 206 8.0E-22
sp|Q99ND9|RWDD1_RAT RWD domain-containing protein 1 OS=Rattus norvegicus GN=Rwdd1 PE=2 SV=1 4 206 1.0E-21
sp|Q9CQK7|RWDD1_MOUSE RWD domain-containing protein 1 OS=Mus musculus GN=Rwdd1 PE=1 SV=1 4 206 3.0E-21
sp|Q03768|GIR2_YEAST Protein GIR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GIR2 PE=1 SV=1 3 235 5.0E-21
sp|O94721|YCF9_SCHPO RWD domain-containing protein C1393.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1393.09c PE=3 SV=1 8 214 8.0E-20
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Swissprot ID Swissprot Description Start End E-value
sp|Q9H446|RWDD1_HUMAN RWD domain-containing protein 1 OS=Homo sapiens GN=RWDD1 PE=1 SV=1 4 206 8.0E-22
sp|Q99ND9|RWDD1_RAT RWD domain-containing protein 1 OS=Rattus norvegicus GN=Rwdd1 PE=2 SV=1 4 206 1.0E-21
sp|Q9CQK7|RWDD1_MOUSE RWD domain-containing protein 1 OS=Mus musculus GN=Rwdd1 PE=1 SV=1 4 206 3.0E-21
sp|Q03768|GIR2_YEAST Protein GIR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GIR2 PE=1 SV=1 3 235 5.0E-21
sp|O94721|YCF9_SCHPO RWD domain-containing protein C1393.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1393.09c PE=3 SV=1 8 214 8.0E-20
sp|Q9CPR1|RWDD4_MOUSE RWD domain-containing protein 4 OS=Mus musculus GN=Rwdd4 PE=2 SV=1 3 145 3.0E-06
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GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear localization signal 0.6726 0.6007 0.0112 0.0705 0.123 0.0013 0.098 0.0372 0.1172 0.001

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1930
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2812
Ophiocordyceps australis map64 (Brazil) OphauB2|7777
Ophiocordyceps camponoti-floridani Ophcf2|07356
Ophiocordyceps camponoti-rufipedis Ophun1|6571
Ophiocordyceps kimflemingae Ophio5|6656
Ophiocordyceps subramaniannii Hirsu2|2063 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2063
MPREEQVEEREVLESIFPDEITDISETEFRISVTLDVPADESGEAEAEAEPPGFLLHVRYPDDYPDAAPHLDMLA
APNAAPRADFSVAEDRAQLLAGLEATVRENLGMAMVFTLVTALREAAEQLIQARHDAATAARDEALLAAERAENA
KFHGTPVTPDSFLRWRRDFLREMDEAERREEEERAAELRRARVKDPVRLTGKQLWERGLAGRGDDDDADDDDAAV
PTEGLERLQVEAA*
Coding >Hirsu2|2063
ATGCCGCGCGAGGAACAGGTGGAAGAGCGCGAGGTGCTCGAGTCCATCTTCCCGGACGAAATCACCGACATCTCC
GAGACCGAGTTCAGGATATCCGTCACGCTGGACGTGCCCGCCGACGAGTCGGGCGAGGCCGAGGCCGAGGCCGAG
CCGCCGGGCTTCCTGCTGCACGTGCGCTACCCGGACGACTACCCGGACGCGGCGCCGCACCTGGACATGCTGGCG
GCGCCCAACGCGGCGCCGCGGGCCGACTTCAGCGTGGCCGAGGACCGGGCGCAGCTGCTGGCCGGGCTGGAGGCG
ACGGTGCGCGAGAACCTGGGCATGGCCATGGTCTTCACCCTCGTCACGGCGCTGCGCGAGGCGGCCGAGCAGCTG
ATACAGGCGCGGCACGACGCCGCCACCGCGGCCCGCGACGAGGCCCTGCTGGCGGCCGAGCGGGCCGAGAACGCA
AAGTTCCACGGCACGCCCGTCACGCCCGACTCCTTCCTGCGCTGGCGCCGCGACTTTTTGCGCGAGATGGACGAG
GCCGAGCGCCGCGAGGAGGAGGAGCGCGCGGCCGAGCTGCGCCGCGCCCGCGTCAAGGACCCCGTCCGCCTCACC
GGCAAGCAGCTCTGGGAGCGCGGCCTGGCCGGCAGGGGCGACGACGACGACGCCGACGACGACGACGCCGCCGTG
CCGACCGAAGGCCTCGAGAGGCTGCAGGTCGAGGCCGCCTGA
Transcript >Hirsu2|2063
ATGCCGCGCGAGGAACAGGTGGAAGAGCGCGAGGTGCTCGAGTCCATCTTCCCGGACGAAATCACCGACATCTCC
GAGACCGAGTTCAGGATATCCGTCACGCTGGACGTGCCCGCCGACGAGTCGGGCGAGGCCGAGGCCGAGGCCGAG
CCGCCGGGCTTCCTGCTGCACGTGCGCTACCCGGACGACTACCCGGACGCGGCGCCGCACCTGGACATGCTGGCG
GCGCCCAACGCGGCGCCGCGGGCCGACTTCAGCGTGGCCGAGGACCGGGCGCAGCTGCTGGCCGGGCTGGAGGCG
ACGGTGCGCGAGAACCTGGGCATGGCCATGGTCTTCACCCTCGTCACGGCGCTGCGCGAGGCGGCCGAGCAGCTG
ATACAGGCGCGGCACGACGCCGCCACCGCGGCCCGCGACGAGGCCCTGCTGGCGGCCGAGCGGGCCGAGAACGCA
AAGTTCCACGGCACGCCCGTCACGCCCGACTCCTTCCTGCGCTGGCGCCGCGACTTTTTGCGCGAGATGGACGAG
GCCGAGCGCCGCGAGGAGGAGGAGCGCGCGGCCGAGCTGCGCCGCGCCCGCGTCAAGGACCCCGTCCGCCTCACC
GGCAAGCAGCTCTGGGAGCGCGGCCTGGCCGGCAGGGGCGACGACGACGACGCCGACGACGACGACGCCGCCGTG
CCGACCGAAGGCCTCGAGAGGCTGCAGGTCGAGGCCGCCTGA
Gene >Hirsu2|2063
ATGCCGCGCGAGGAACAGGTGGAAGAGCGCGAGGTGCTCGAGTCCATCTTCCCGGACGAAATCACCGGTGCGCCC
GTCCGTCCCAGAGAGCTTGAAAAAGAAGAGAAGAGAAAGGAGAGAAAAAAAACATTAACCCGACTCATGCGGTGA
GCAGACATCTCCGAGACCGAGTTCAGGATATCCGTCACGCTGGACGTGCCCGCCGACGAGTCGGGCGAGGCCGAG
GCCGAGGCCGAGCCGCCGGGCTTCCTGCTGCACGTGCGCTACCCGGACGACTACCCGGACGCGGCGCCGCACCTG
GACATGCTGGCGGCGCCCAACGCGGCGCCGCGGGCCGACTTCAGCGTGGCCGAGGACCGGGCGCAGCTGCTGGCC
GGGCTGGAGGCGACGGTGCGCGAGAACCTGGGCATGGCCATGGTCTTCACCCTCGTCACGGCGCTGCGCGAGGCG
GCCGAGCAGCTGATACAGGCGCGGCACGACGCCGCCACCGCGGCCCGCGACGAGGCCCTGCTGGCGGCCGAGCGG
GCCGAGAACGCAAAGTTCCACGGCACGCCCGTCACGCCCGACTCCTTCCTGCGCTGGCGCCGCGACTTTTTGCGC
GAGATGGACGAGGCCGAGCGCCGCGAGGAGGAGGAGCGCGCGGCCGAGCTGCGCCGCGCCCGCGTCAAGGACCCC
GTCCGCCTCACCGGCAAGCAGCTCTGGGAGCGCGGCCTGGCCGGCAGGGGCGACGACGACGACGCCGACGACGAC
GACGCCGCCGTGCCGACCGAAGGCCTCGAGAGGCTGCAGGTCGAGGCCGCCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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