© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2063 |
| Gene name | |
| Location | Contig_148:32860..33664 |
| Strand | + |
| Gene length (bp) | 804 |
| Transcript length (bp) | 717 |
| Coding sequence length (bp) | 717 |
| Protein length (aa) | 239 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05773 | RWD | RWD domain | 3.1E-22 | 4 | 121 |
| PF16543 | DFRP_C | DRG Family Regulatory Proteins, Tma46 | 9.2E-08 | 139 | 222 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9H446|RWDD1_HUMAN | RWD domain-containing protein 1 OS=Homo sapiens GN=RWDD1 PE=1 SV=1 | 4 | 206 | 8.0E-22 |
| sp|Q99ND9|RWDD1_RAT | RWD domain-containing protein 1 OS=Rattus norvegicus GN=Rwdd1 PE=2 SV=1 | 4 | 206 | 1.0E-21 |
| sp|Q9CQK7|RWDD1_MOUSE | RWD domain-containing protein 1 OS=Mus musculus GN=Rwdd1 PE=1 SV=1 | 4 | 206 | 3.0E-21 |
| sp|Q03768|GIR2_YEAST | Protein GIR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GIR2 PE=1 SV=1 | 3 | 235 | 5.0E-21 |
| sp|O94721|YCF9_SCHPO | RWD domain-containing protein C1393.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1393.09c PE=3 SV=1 | 8 | 214 | 8.0E-20 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9H446|RWDD1_HUMAN | RWD domain-containing protein 1 OS=Homo sapiens GN=RWDD1 PE=1 SV=1 | 4 | 206 | 8.0E-22 |
| sp|Q99ND9|RWDD1_RAT | RWD domain-containing protein 1 OS=Rattus norvegicus GN=Rwdd1 PE=2 SV=1 | 4 | 206 | 1.0E-21 |
| sp|Q9CQK7|RWDD1_MOUSE | RWD domain-containing protein 1 OS=Mus musculus GN=Rwdd1 PE=1 SV=1 | 4 | 206 | 3.0E-21 |
| sp|Q03768|GIR2_YEAST | Protein GIR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GIR2 PE=1 SV=1 | 3 | 235 | 5.0E-21 |
| sp|O94721|YCF9_SCHPO | RWD domain-containing protein C1393.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1393.09c PE=3 SV=1 | 8 | 214 | 8.0E-20 |
| sp|Q9CPR1|RWDD4_MOUSE | RWD domain-containing protein 4 OS=Mus musculus GN=Rwdd4 PE=2 SV=1 | 3 | 145 | 3.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 60 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2063 MPREEQVEEREVLESIFPDEITDISETEFRISVTLDVPADESGEAEAEAEPPGFLLHVRYPDDYPDAAPHLDMLA APNAAPRADFSVAEDRAQLLAGLEATVRENLGMAMVFTLVTALREAAEQLIQARHDAATAARDEALLAAERAENA KFHGTPVTPDSFLRWRRDFLREMDEAERREEEERAAELRRARVKDPVRLTGKQLWERGLAGRGDDDDADDDDAAV PTEGLERLQVEAA* |
| Coding | >Hirsu2|2063 ATGCCGCGCGAGGAACAGGTGGAAGAGCGCGAGGTGCTCGAGTCCATCTTCCCGGACGAAATCACCGACATCTCC GAGACCGAGTTCAGGATATCCGTCACGCTGGACGTGCCCGCCGACGAGTCGGGCGAGGCCGAGGCCGAGGCCGAG CCGCCGGGCTTCCTGCTGCACGTGCGCTACCCGGACGACTACCCGGACGCGGCGCCGCACCTGGACATGCTGGCG GCGCCCAACGCGGCGCCGCGGGCCGACTTCAGCGTGGCCGAGGACCGGGCGCAGCTGCTGGCCGGGCTGGAGGCG ACGGTGCGCGAGAACCTGGGCATGGCCATGGTCTTCACCCTCGTCACGGCGCTGCGCGAGGCGGCCGAGCAGCTG ATACAGGCGCGGCACGACGCCGCCACCGCGGCCCGCGACGAGGCCCTGCTGGCGGCCGAGCGGGCCGAGAACGCA AAGTTCCACGGCACGCCCGTCACGCCCGACTCCTTCCTGCGCTGGCGCCGCGACTTTTTGCGCGAGATGGACGAG GCCGAGCGCCGCGAGGAGGAGGAGCGCGCGGCCGAGCTGCGCCGCGCCCGCGTCAAGGACCCCGTCCGCCTCACC GGCAAGCAGCTCTGGGAGCGCGGCCTGGCCGGCAGGGGCGACGACGACGACGCCGACGACGACGACGCCGCCGTG CCGACCGAAGGCCTCGAGAGGCTGCAGGTCGAGGCCGCCTGA |
| Transcript | >Hirsu2|2063 ATGCCGCGCGAGGAACAGGTGGAAGAGCGCGAGGTGCTCGAGTCCATCTTCCCGGACGAAATCACCGACATCTCC GAGACCGAGTTCAGGATATCCGTCACGCTGGACGTGCCCGCCGACGAGTCGGGCGAGGCCGAGGCCGAGGCCGAG CCGCCGGGCTTCCTGCTGCACGTGCGCTACCCGGACGACTACCCGGACGCGGCGCCGCACCTGGACATGCTGGCG GCGCCCAACGCGGCGCCGCGGGCCGACTTCAGCGTGGCCGAGGACCGGGCGCAGCTGCTGGCCGGGCTGGAGGCG ACGGTGCGCGAGAACCTGGGCATGGCCATGGTCTTCACCCTCGTCACGGCGCTGCGCGAGGCGGCCGAGCAGCTG ATACAGGCGCGGCACGACGCCGCCACCGCGGCCCGCGACGAGGCCCTGCTGGCGGCCGAGCGGGCCGAGAACGCA AAGTTCCACGGCACGCCCGTCACGCCCGACTCCTTCCTGCGCTGGCGCCGCGACTTTTTGCGCGAGATGGACGAG GCCGAGCGCCGCGAGGAGGAGGAGCGCGCGGCCGAGCTGCGCCGCGCCCGCGTCAAGGACCCCGTCCGCCTCACC GGCAAGCAGCTCTGGGAGCGCGGCCTGGCCGGCAGGGGCGACGACGACGACGCCGACGACGACGACGCCGCCGTG CCGACCGAAGGCCTCGAGAGGCTGCAGGTCGAGGCCGCCTGA |
| Gene | >Hirsu2|2063 ATGCCGCGCGAGGAACAGGTGGAAGAGCGCGAGGTGCTCGAGTCCATCTTCCCGGACGAAATCACCGGTGCGCCC GTCCGTCCCAGAGAGCTTGAAAAAGAAGAGAAGAGAAAGGAGAGAAAAAAAACATTAACCCGACTCATGCGGTGA GCAGACATCTCCGAGACCGAGTTCAGGATATCCGTCACGCTGGACGTGCCCGCCGACGAGTCGGGCGAGGCCGAG GCCGAGGCCGAGCCGCCGGGCTTCCTGCTGCACGTGCGCTACCCGGACGACTACCCGGACGCGGCGCCGCACCTG GACATGCTGGCGGCGCCCAACGCGGCGCCGCGGGCCGACTTCAGCGTGGCCGAGGACCGGGCGCAGCTGCTGGCC GGGCTGGAGGCGACGGTGCGCGAGAACCTGGGCATGGCCATGGTCTTCACCCTCGTCACGGCGCTGCGCGAGGCG GCCGAGCAGCTGATACAGGCGCGGCACGACGCCGCCACCGCGGCCCGCGACGAGGCCCTGCTGGCGGCCGAGCGG GCCGAGAACGCAAAGTTCCACGGCACGCCCGTCACGCCCGACTCCTTCCTGCGCTGGCGCCGCGACTTTTTGCGC GAGATGGACGAGGCCGAGCGCCGCGAGGAGGAGGAGCGCGCGGCCGAGCTGCGCCGCGCCCGCGTCAAGGACCCC GTCCGCCTCACCGGCAAGCAGCTCTGGGAGCGCGGCCTGGCCGGCAGGGGCGACGACGACGACGCCGACGACGAC GACGCCGCCGTGCCGACCGAAGGCCTCGAGAGGCTGCAGGTCGAGGCCGCCTGA |