Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2060
Gene name
LocationContig_148:27646..28767
Strand-
Gene length (bp)1121
Transcript length (bp)1044
Coding sequence length (bp)1044
Protein length (aa) 348

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cell membrane Signal peptide 0.1159 0.1425 0.5707 0.7068 0.1039 0.0065 0.0657 0.3681 0.1614 0.033

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 170 192 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4969
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6121
Ophiocordyceps australis map64 (Brazil) OphauB2|7775
Ophiocordyceps camponoti-floridani Ophcf2|07318
Ophiocordyceps camponoti-rufipedis Ophun1|4440
Ophiocordyceps kimflemingae Ophio5|8361
Ophiocordyceps subramaniannii Hirsu2|2060 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2060
MGSRADEEGGQCPRGKAFYSCVGTHFRGCCSVDPCHLAGCPDDEDEAETASGDGRRGSSLSRAEAGGAQTSSTRT
DSGITHTVPNHSVVTVTRHTLVFSEAPASTAAPSSSSSSDPDRVTAGRASSASAASSSLPAAPVTSSALATGPGE
TSAAGDNDVGGGGETPSSGAIVGAAAGALVVGAILVVLVLAWRRRRRDQQGRRAASSLFQDCVGEAKAADKEQPP
QPPQQPMSAHTTGTQASADPFAPFGGRFDKDPLRPPSGAFEMDGTGIAPVELPAEPPAAEPSPPLSPPPPAAGQD
ARPCRPYQPPAAATDPRANLNSLETDGGRAAHVNHWDQWRALGGESP*
Coding >Hirsu2|2060
ATGGGCTCGCGCGCCGACGAGGAGGGCGGGCAGTGCCCGCGCGGCAAGGCCTTCTACTCGTGCGTCGGCACGCAC
TTCCGCGGCTGCTGCTCCGTCGACCCGTGCCACCTGGCGGGCTGCCCCGACGACGAGGACGAGGCTGAGACGGCG
TCGGGCGATGGCCGGCGGGGGTCGTCGTTGTCGAGGGCCGAGGCGGGCGGCGCGCAAACGTCGTCGACGAGGACC
GACTCGGGCATCACGCACACGGTCCCCAACCACTCCGTCGTCACCGTCACCCGCCACACCCTCGTCTTCTCCGAG
GCTCCGGCCTCTACCGCCGCCCCGTCGTCGTCGTCGTCGTCGGATCCGGATCGCGTCACCGCCGGCCGTGCCTCG
TCCGCCTCCGCCGCCTCCTCCTCCTTGCCCGCCGCCCCCGTGACGTCGAGCGCGCTCGCGACGGGGCCCGGCGAG
ACGAGCGCCGCGGGCGACAACGACGTCGGGGGCGGCGGCGAGACGCCCTCGTCGGGGGCCATCGTCGGCGCCGCC
GCCGGCGCCCTCGTCGTCGGCGCCATCCTCGTCGTCCTCGTCCTCGCCTGGAGACGCCGCCGGCGTGACCAGCAG
GGCCGCCGCGCCGCGAGCTCCCTCTTCCAGGACTGCGTCGGCGAGGCCAAGGCGGCCGACAAGGAGCAGCCGCCG
CAGCCGCCGCAGCAGCCCATGTCGGCCCACACCACCGGCACCCAGGCCAGCGCCGACCCCTTCGCCCCCTTCGGA
GGCCGTTTCGACAAGGACCCGCTCCGCCCGCCGAGCGGCGCCTTCGAGATGGACGGCACCGGCATCGCCCCCGTC
GAGCTGCCCGCCGAGCCGCCCGCCGCCGAGCCGTCTCCGCCTCTGTCTCCTCCTCCTCCCGCCGCCGGCCAGGAC
GCGCGGCCCTGCCGCCCCTACCAGCCGCCCGCCGCTGCCACGGACCCGCGAGCCAACCTCAACTCCCTCGAGACG
GACGGCGGCCGTGCCGCCCACGTCAACCACTGGGACCAGTGGAGGGCCCTCGGCGGCGAGAGCCCGTGA
Transcript >Hirsu2|2060
ATGGGCTCGCGCGCCGACGAGGAGGGCGGGCAGTGCCCGCGCGGCAAGGCCTTCTACTCGTGCGTCGGCACGCAC
TTCCGCGGCTGCTGCTCCGTCGACCCGTGCCACCTGGCGGGCTGCCCCGACGACGAGGACGAGGCTGAGACGGCG
TCGGGCGATGGCCGGCGGGGGTCGTCGTTGTCGAGGGCCGAGGCGGGCGGCGCGCAAACGTCGTCGACGAGGACC
GACTCGGGCATCACGCACACGGTCCCCAACCACTCCGTCGTCACCGTCACCCGCCACACCCTCGTCTTCTCCGAG
GCTCCGGCCTCTACCGCCGCCCCGTCGTCGTCGTCGTCGTCGGATCCGGATCGCGTCACCGCCGGCCGTGCCTCG
TCCGCCTCCGCCGCCTCCTCCTCCTTGCCCGCCGCCCCCGTGACGTCGAGCGCGCTCGCGACGGGGCCCGGCGAG
ACGAGCGCCGCGGGCGACAACGACGTCGGGGGCGGCGGCGAGACGCCCTCGTCGGGGGCCATCGTCGGCGCCGCC
GCCGGCGCCCTCGTCGTCGGCGCCATCCTCGTCGTCCTCGTCCTCGCCTGGAGACGCCGCCGGCGTGACCAGCAG
GGCCGCCGCGCCGCGAGCTCCCTCTTCCAGGACTGCGTCGGCGAGGCCAAGGCGGCCGACAAGGAGCAGCCGCCG
CAGCCGCCGCAGCAGCCCATGTCGGCCCACACCACCGGCACCCAGGCCAGCGCCGACCCCTTCGCCCCCTTCGGA
GGCCGTTTCGACAAGGACCCGCTCCGCCCGCCGAGCGGCGCCTTCGAGATGGACGGCACCGGCATCGCCCCCGTC
GAGCTGCCCGCCGAGCCGCCCGCCGCCGAGCCGTCTCCGCCTCTGTCTCCTCCTCCTCCCGCCGCCGGCCAGGAC
GCGCGGCCCTGCCGCCCCTACCAGCCGCCCGCCGCTGCCACGGACCCGCGAGCCAACCTCAACTCCCTCGAGACG
GACGGCGGCCGTGCCGCCCACGTCAACCACTGGGACCAGTGGAGGGCCCTCGGCGGCGAGAGCCCGTGA
Gene >Hirsu2|2060
ATGGGCTCGCGCGCCGACGAGGAGGGCGGGCAGTGCCCGCGCGGCAAGGCCTTCTACTCGTGCGTCGGCACGCAC
TTCCGCGGCTGCTGCTCCGTCGACCCGTGCCACCTGGCGGGCTGCCCCGACGACGAGGACGAGGCTGAGACGGCG
TCGGGCGATGGCCGGCGGGGGTCGTCGTTGTCGAGGGCCGAGGCGGGCGGCGCGCAAACGTCGTCGACGAGGACC
GACTCGGGCATCACGCACACGGTCCCCAACCACTCCGTCGTCACCGTCACCCGCCACACCCTCGTCTTCTCCGAG
GCTCCGGCCTCTACCGCCGCCCCGTCGTCGTCGTCGTCGTCGGATCCGGATCGCGTCACCGCCGGCCGTGCCTCG
TCCGCCTCCGCCGCCTCCTCCTCCTTGCCCGCCGCCCCCGTGACGTCGAGCGCGCTCGCGACGGGGCCCGGCGAG
ACGAGCGCCGCGGGCGACAACGACGTCGGGGGCGGCGGCGAGACGCCCTCGTCGGGGGCCATCGTCGGCGCCGCC
GCCGGCGCCCTCGTCGTCGGCGCCATCCTCGTCGTCCTCGTCCTCGCCTGGAGACGCCGCCGGCGTGACCAGCAG
GGCCGCCGCGCCGCGAGCTCCCTCTTCCAGGACTGCGTCGGCGAGGCCAAGGCGGCCGACAAGGAGCAGCCGCCG
CAGCCGCCGCAGCAGCCCATGTCGGCCCACACCACCGGCACCCAGGCCAGCGCCGACCCCTTCGCCCCCTTCGGA
GGTGAAGATCCCTCCCGCCCGGACGCCGTGCGCCGCCCGAGCCCCGTGTTGACAAGCTTCCCCCCGTTCTCTCTC
CAGGCCGTTTCGACAAGGACCCGCTCCGCCCGCCGAGCGGCGCCTTCGAGATGGACGGCACCGGCATCGCCCCCG
TCGAGCTGCCCGCCGAGCCGCCCGCCGCCGAGCCGTCTCCGCCTCTGTCTCCTCCTCCTCCCGCCGCCGGCCAGG
ACGCGCGGCCCTGCCGCCCCTACCAGCCGCCCGCCGCTGCCACGGACCCGCGAGCCAACCTCAACTCCCTCGAGA
CGGACGGCGGCCGTGCCGCCCACGTCAACCACTGGGACCAGTGGAGGGCCCTCGGCGGCGAGAGCCCGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail