Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2047
Gene name
LocationContig_148:2752..3971
Strand-
Gene length (bp)1219
Transcript length (bp)924
Coding sequence length (bp)924
Protein length (aa) 308

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01145 Band_7 SPFH domain / Band 7 family 2.6E-22 58 236

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P50085|PHB2_YEAST Prohibitin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHB2 PE=1 SV=2 3 298 2.0E-132
sp|O94550|PHB2_SCHPO Prohibitin-2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=phb2 PE=1 SV=2 55 298 2.0E-124
sp|Q5XIH7|PHB2_RAT Prohibitin-2 OS=Rattus norvegicus GN=Phb2 PE=1 SV=1 25 303 2.0E-103
sp|O35129|PHB2_MOUSE Prohibitin-2 OS=Mus musculus GN=Phb2 PE=1 SV=1 25 303 3.0E-103
sp|Q99623|PHB2_HUMAN Prohibitin-2 OS=Homo sapiens GN=PHB2 PE=1 SV=2 25 303 3.0E-103
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Swissprot ID Swissprot Description Start End E-value
sp|P50085|PHB2_YEAST Prohibitin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHB2 PE=1 SV=2 3 298 2.0E-132
sp|O94550|PHB2_SCHPO Prohibitin-2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=phb2 PE=1 SV=2 55 298 2.0E-124
sp|Q5XIH7|PHB2_RAT Prohibitin-2 OS=Rattus norvegicus GN=Phb2 PE=1 SV=1 25 303 2.0E-103
sp|O35129|PHB2_MOUSE Prohibitin-2 OS=Mus musculus GN=Phb2 PE=1 SV=1 25 303 3.0E-103
sp|Q99623|PHB2_HUMAN Prohibitin-2 OS=Homo sapiens GN=PHB2 PE=1 SV=2 25 303 3.0E-103
sp|Q2HJ97|PHB2_BOVIN Prohibitin-2 OS=Bos taurus GN=PHB2 PE=2 SV=1 25 303 1.0E-102
sp|A9UMS3|PHB2_XENTR Prohibitin-2 OS=Xenopus tropicalis GN=phb2 PE=2 SV=1 25 303 2.0E-102
sp|Q5RB19|PHB2_PONAB Prohibitin-2 OS=Pongo abelii GN=PHB2 PE=2 SV=1 25 303 5.0E-102
sp|Q9ZNT7|PHB2_ARATH Prohibitin-2, mitochondrial OS=Arabidopsis thaliana GN=PHB2 PE=1 SV=1 29 285 8.0E-102
sp|Q54Q31|PHB2_DICDI Prohibitin-2 OS=Dictyostelium discoideum GN=phbB PE=3 SV=1 55 304 1.0E-101
sp|O49460|PHB1_ARATH Prohibitin-1, mitochondrial OS=Arabidopsis thaliana GN=PHB1 PE=1 SV=1 53 299 2.0E-100
sp|Q9SIL6|PHB6_ARATH Prohibitin-6, mitochondrial OS=Arabidopsis thaliana GN=PHB6 PE=1 SV=1 31 285 8.0E-100
sp|P50093|PHB2_CAEEL Mitochondrial prohibitin complex protein 2 OS=Caenorhabditis elegans GN=phb-2 PE=1 SV=2 55 302 6.0E-99
sp|Q5ZMN3|PHB2_CHICK Prohibitin-2 OS=Gallus gallus GN=PHB2 PE=2 SV=1 19 301 1.0E-97
sp|Q9FFH5|PHB7_ARATH Prohibitin-7, mitochondrial OS=Arabidopsis thaliana GN=PHB7 PE=1 SV=1 48 295 9.0E-94
sp|Q54GI9|PHB1_DICDI Prohibitin-1, mitochondrial OS=Dictyostelium discoideum GN=phbA PE=3 SV=1 35 282 2.0E-90
sp|Q9P7H3|PHB1_SCHPO Prohibitin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=phb1 PE=3 SV=1 48 285 3.0E-88
sp|P67779|PHB_RAT Prohibitin OS=Rattus norvegicus GN=Phb PE=1 SV=1 45 279 4.0E-88
sp|P67778|PHB_MOUSE Prohibitin OS=Mus musculus GN=Phb PE=1 SV=1 45 279 4.0E-88
sp|P35232|PHB_HUMAN Prohibitin OS=Homo sapiens GN=PHB PE=1 SV=1 45 279 1.0E-87
sp|Q3T165|PHB_BOVIN Prohibitin OS=Bos taurus GN=PHB PE=2 SV=1 45 279 1.0E-87
sp|P84173|PHB_CHICK Prohibitin OS=Gallus gallus GN=PHB PE=1 SV=1 45 279 2.0E-87
sp|P40961|PHB1_YEAST Prohibitin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHB1 PE=1 SV=2 55 293 1.0E-85
sp|P24156|L2CC_DROME Protein l(2)37Cc OS=Drosophila melanogaster GN=l(2)37Cc PE=2 SV=2 35 279 1.0E-85
sp|O04331|PHB3_ARATH Prohibitin-3, mitochondrial OS=Arabidopsis thaliana GN=PHB3 PE=1 SV=1 38 279 1.0E-84
sp|Q9LK25|PHB4_ARATH Prohibitin-4, mitochondrial OS=Arabidopsis thaliana GN=PHB4 PE=1 SV=1 38 279 1.0E-82
sp|Q9BKU4|PHB1_CAEEL Mitochondrial prohibitin complex protein 1 OS=Caenorhabditis elegans GN=phb-1 PE=1 SV=1 45 286 9.0E-77
sp|Q9LY99|PHB5_ARATH Prohibitin-5, mitochondrial OS=Arabidopsis thaliana GN=PHB5 PE=3 SV=1 54 294 5.0E-59
sp|P86220|PHB_MESAU Prohibitin (Fragments) OS=Mesocricetus auratus GN=PHB PE=1 SV=1 113 225 1.0E-14
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 44 0.5

Transmembrane Domains

Domain # Start End Length
1 37 59 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2047
MSGPRNNFEQAMQRLRQMQSRGGGGGGGPWVPRGMGPLITGSFLLAGGAMLFSNALFNVDGGHRAIKYRRLSGVS
KDIYSEGTHINIPWFETPIVYDVRAKPRNVASLTGTKDLQMVNITCRVLSRPQVDALPQIYRTLGADYDERVLPS
IVNEVLKSVVAQFNASQLITQREMVAKLVRENLSRRAARFNILLDDVSLTHLAFSPEFTAAVEAKQVAQQEAQRA
AFVVDKARQEKQAMVVKAQGEARSAELIGEAIKKNKAYVELKKIENARLIAQQLHEAGSKNRLLLDAQGLGLNVF
DTSSEKN*
Coding >Hirsu2|2047
ATGTCCGGCCCACGGAACAACTTCGAGCAGGCGATGCAGCGGCTGCGCCAGATGCAGTCGCGAGGCGGCGGCGGC
GGCGGCGGACCCTGGGTGCCCCGGGGCATGGGCCCCCTCATCACCGGCAGCTTCCTGCTCGCTGGCGGTGCCATG
CTCTTCTCCAATGCGCTATTCAACGTCGACGGTGGCCACCGAGCCATAAAGTATCGGAGGCTAAGCGGCGTGAGC
AAGGACATCTACAGCGAAGGAACGCACATCAACATCCCTTGGTTCGAGACGCCGATCGTGTACGACGTGCGCGCG
AAGCCGCGCAACGTGGCGTCCCTGACGGGCACAAAGGACCTGCAGATGGTCAACATCACCTGCCGAGTGCTGTCG
AGGCCGCAGGTGGACGCGCTGCCGCAGATCTACCGGACTCTGGGGGCCGACTATGACGAGCGGGTGCTGCCGTCC
ATTGTCAACGAGGTGCTGAAGAGCGTTGTCGCCCAATTCAACGCCAGCCAGCTTATCACGCAGCGTGAGATGGTG
GCCAAGCTCGTCCGCGAGAACTTGTCGCGCCGAGCGGCACGCTTCAACATCCTCCTTGACGACGTCTCCCTCACG
CACCTTGCCTTCTCGCCCGAGTTCACTGCGGCCGTCGAGGCCAAGCAGGTGGCCCAGCAGGAAGCGCAGCGGGCC
GCCTTCGTGGTCGACAAGGCGCGGCAGGAGAAGCAGGCCATGGTGGTCAAGGCCCAGGGTGAGGCGCGGTCCGCG
GAGCTCATCGGCGAGGCCATCAAGAAGAATAAGGCGTACGTGGAGCTCAAGAAGATCGAGAACGCGCGCCTGATC
GCGCAGCAGCTGCACGAGGCGGGCTCCAAGAACCGCCTGCTGCTGGACGCACAGGGTCTGGGCCTCAACGTCTTC
GACACGTCGTCGGAGAAGAACTAG
Transcript >Hirsu2|2047
ATGTCCGGCCCACGGAACAACTTCGAGCAGGCGATGCAGCGGCTGCGCCAGATGCAGTCGCGAGGCGGCGGCGGC
GGCGGCGGACCCTGGGTGCCCCGGGGCATGGGCCCCCTCATCACCGGCAGCTTCCTGCTCGCTGGCGGTGCCATG
CTCTTCTCCAATGCGCTATTCAACGTCGACGGTGGCCACCGAGCCATAAAGTATCGGAGGCTAAGCGGCGTGAGC
AAGGACATCTACAGCGAAGGAACGCACATCAACATCCCTTGGTTCGAGACGCCGATCGTGTACGACGTGCGCGCG
AAGCCGCGCAACGTGGCGTCCCTGACGGGCACAAAGGACCTGCAGATGGTCAACATCACCTGCCGAGTGCTGTCG
AGGCCGCAGGTGGACGCGCTGCCGCAGATCTACCGGACTCTGGGGGCCGACTATGACGAGCGGGTGCTGCCGTCC
ATTGTCAACGAGGTGCTGAAGAGCGTTGTCGCCCAATTCAACGCCAGCCAGCTTATCACGCAGCGTGAGATGGTG
GCCAAGCTCGTCCGCGAGAACTTGTCGCGCCGAGCGGCACGCTTCAACATCCTCCTTGACGACGTCTCCCTCACG
CACCTTGCCTTCTCGCCCGAGTTCACTGCGGCCGTCGAGGCCAAGCAGGTGGCCCAGCAGGAAGCGCAGCGGGCC
GCCTTCGTGGTCGACAAGGCGCGGCAGGAGAAGCAGGCCATGGTGGTCAAGGCCCAGGGTGAGGCGCGGTCCGCG
GAGCTCATCGGCGAGGCCATCAAGAAGAATAAGGCGTACGTGGAGCTCAAGAAGATCGAGAACGCGCGCCTGATC
GCGCAGCAGCTGCACGAGGCGGGCTCCAAGAACCGCCTGCTGCTGGACGCACAGGGTCTGGGCCTCAACGTCTTC
GACACGTCGTCGGAGAAGAACTAG
Gene >Hirsu2|2047
ATGTCCGGCCCACGGAACAACTTCGAGCAGGCGATGCAGCGGCTGCGCCAGATGCAGTCGCGAGGCGGCGGCGGC
GGCGGCGGACCCTGGGTGCCCCGGGGCATGGGCCCCCTCATCACCGGCAGCTTCCTGCTCGCTGGCGGTGCCATG
CTCTTCTCCAATGCGCTATTCAACGTCGACGGTGGCCACCGAGCCATAAAGTATCGGAGGCTAAGCGGCGTGAGC
AAGGACATCTACAGCGAAGGTCAGTCGGTGAACGCGGGACGGGACCGGGAGCCGAGCCCTTGAAAGGGAAGACAG
AGACAGCAAGAGAGGGAGAGGGGGAGTAGAAGAGACCGCGACTGGTTCTGGGAGAGATGGAAGCATAGAGTGGCG
GGCCAGAGCCGCGATTGTCATGAATCTCGCTGACGACAGGATGCTCCCTCCCACAGGAACGCACATCAACATCCC
TTGGTTCGAGACGCCGATCGTGTACGACGTGCGCGCGAAGCCGCGCAACGTGGCGTCCCTGACGGGCACAAAGGA
CCTGCAGATGGTCAACATCACCTGCCGAGTGCTGTCGAGGCCGCAGGTGGACGCGCTGCCGCAGATCTACCGGAC
TCTGGGGGCCGACTATGACGAGCGGGTGCTGCCGTCCATTGTCAACGAGGTGCTGAAGAGCGTTGTCGCCCAATT
CAACGCCAGCCAGCTTATCACGCAGCGTGAGATGGTGGCCAAGCTCGTCCGCGAGAACTTGTCGCGCCGAGCGGC
ACGCTTCAACATCCTCCTTGACGACGTCTCCCTCACGGTGCGTACCCTTCACCCACCCGCCCCGGCAGAGCAGAG
CAGCCAAACTTGGCGCTTGTTTGATGACGGGCACGGCTCGCTGACAAAATGAAAATCCGGCTTCGCGCAGCACCT
TGCCTTCTCGCCCGAGTTCACTGCGGCCGTCGAGGCCAAGCAGGTGGCCCAGCAGGAAGCGCAGCGGGCCGCCTT
CGTGGTCGACAAGGCGCGGCAGGAGAAGCAGGCCATGGTGGTCAAGGCCCAGGGTGAGGCGCGGTCCGCGGAGCT
CATCGGCGAGGCCATCAAGAAGAATAAGGCGTACGTGGAGCTCAAGAAGATCGAGAACGCGCGCCTGATCGCGCA
GCAGCTGCACGAGGCGGGCTCCAAGAACCGCCTGCTGCTGGACGCACAGGGTCTGGGCCTCAACGTCTTCGACAC
GTCGTCGGAGAAGAACTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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