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| Protein ID | Hirsu2|2043 |
| Gene name | |
| Location | Contig_1477:965..1438 |
| Strand | - |
| Gene length (bp) | 473 |
| Transcript length (bp) | 219 |
| Coding sequence length (bp) | 219 |
| Protein length (aa) | 73 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12907 | zf-met2 | Zinc-binding | 1.5E-16 | 35 | 70 |
| PF04419 | 4F5 | 4F5 protein related disordered region | 2.6E-07 | 1 | 32 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O64818|Y2309_ARATH | Uncharacterized protein At2g23090 OS=Arabidopsis thaliana GN=At2g23090 PE=1 SV=1 | 2 | 69 | 8.0E-10 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | Nuclear localization signal | 0.5277 | 0.5331 | 0.1904 | 0.25 | 0.129 | 0.0122 | 0.0448 | 0.009 | 0.0459 | 0.0003 |
| Orthofinder run ID | 4 |
| Orthogroup | 6052 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2043 MGNGAKAQQKRERNQKDGKTAKSQLKENEKAMSIQCQVCKATFLQTTKAPALLEHASNKHNKGLADCFPSKA* |
| Coding | >Hirsu2|2043 ATGGGCAACGGAGCCAAGGCACAGCAGAAGCGCGAGCGCAACCAGAAGGACGGAAAGACGGCCAAGTCGCAACTC AAGGAGAACGAGAAGGCCATGAGCATCCAGTGCCAAGTCTGCAAGGCCACCTTCCTCCAGACCACCAAGGCCCCT GCCCTCCTCGAACATGCGTCGAATAAGCACAACAAAGGCCTAGCCGACTGCTTTCCCAGCAAGGCCTGA |
| Transcript | >Hirsu2|2043 ATGGGCAACGGAGCCAAGGCACAGCAGAAGCGCGAGCGCAACCAGAAGGACGGAAAGACGGCCAAGTCGCAACTC AAGGAGAACGAGAAGGCCATGAGCATCCAGTGCCAAGTCTGCAAGGCCACCTTCCTCCAGACCACCAAGGCCCCT GCCCTCCTCGAACATGCGTCGAATAAGCACAACAAAGGCCTAGCCGACTGCTTTCCCAGCAAGGCCTGA |
| Gene | >Hirsu2|2043 ATGGGCAACGTAGGGACCGTTCCCAACCCCTGTTTTTTTTTTTTTACTTGTCTGCCGTGAATAGACCCGGCTGAC CTGCTGGGAAAAACTCAACGCGATGGAATGCCTAGGGAGCCAAGGCACAGCAGAAGCGCGAGCGCAACCAGAAGG ACGGAAAGACGGCCAAGTCGCAACTCAAGGAGGTACGTTCTGCAGACCCCACCAATGCGCCTCTACCGTCCGTTT GGTGTTGACCGGCCGCGGCTTCGGTATAGAACGAGAAGGCCATGAGCATCCAGTGCCAAGTCTGCAAGGCCACCT TCCTCCAGACCACCAAGGCCCCTGCGTGCGTGACGCCCTTCCATCTCCCCTCACACCCCCCCTGGCATCTGCTGA CATGCCCCCGCGTCCTGTCTCTCGTCGATAGCCTCCTCGAACATGCGTCGAATAAGCACAACAAAGGCCTAGCCG ACTGCTTTCCCAGCAAGGCCTGA |