© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2041 |
| Gene name | |
| Location | Contig_1475:4345..5635 |
| Strand | + |
| Gene length (bp) | 1290 |
| Transcript length (bp) | 792 |
| Coding sequence length (bp) | 792 |
| Protein length (aa) | 264 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | Nuclear localization signal | 0.5703 | 0.675 | 0.4298 | 0.1325 | 0.1762 | 0.0425 | 0.1022 | 0.1678 | 0.1957 | 0.0159 |
| Orthofinder run ID | 4 |
| Orthogroup | 8967 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|2041 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2041 MGQGAAPMSGCMARSSRPHLSDESGFLVLASMLVRWRFARPQAQAQAEKAHEWRALVVDDDGMLLRSHCSAHVSG ACMARWSRGGSEAGAEAGAGGRTGTHSCTGAHIVRGQAVSPGPWSRWRRPNAEANVQAVALQRPARGWLGPTASQ TVAGACKTRPEKTADDGPGSAEGRLAIQSGPAHRGGMGVVYHLGLHIVHGVHVTMSSADAGTANGGGKAPPAQAG GRHRVSAARPPPPQRPAQAGRAGSRKRALARKKDEGES* |
| Coding | >Hirsu2|2041 ATGGGCCAGGGTGCGGCACCAATGAGTGGCTGCATGGCAAGATCGAGCCGCCCGCATCTCTCCGACGAGTCCGGG TTCTTGGTACTGGCGTCGATGCTTGTTCGCTGGCGCTTCGCTCGGCCGCAGGCGCAGGCGCAGGCCGAAAAGGCG CACGAGTGGCGGGCGTTGGTGGTGGACGATGATGGCATGCTCCTCCGATCTCACTGCTCAGCACACGTCTCGGGC GCATGCATGGCTCGATGGAGTCGAGGAGGCAGCGAAGCAGGCGCAGAAGCAGGCGCAGGCGGGCGCACAGGCACG CACAGCTGCACAGGCGCACACATTGTGCGTGGACAGGCAGTATCGCCAGGTCCCTGGAGCCGGTGGCGACGGCCC AATGCAGAGGCAAACGTGCAGGCCGTTGCGCTCCAACGGCCGGCTCGTGGCTGGCTGGGCCCGACAGCGTCGCAG ACGGTTGCCGGCGCATGCAAGACAAGACCAGAGAAGACGGCCGACGATGGCCCGGGCTCGGCGGAAGGGCGACTG GCAATCCAATCGGGCCCCGCCCACCGAGGGGGGATGGGTGTTGTTTATCATTTGGGCTTACACATTGTACATGGT GTGCATGTCACCATGTCGTCTGCCGATGCCGGGACGGCCAACGGCGGCGGCAAAGCTCCCCCAGCGCAGGCCGGC GGCCGTCATCGAGTCAGTGCCGCCCGCCCCCCCCCCCCCCAGCGTCCAGCGCAGGCCGGCAGAGCAGGCAGCAGG AAGCGGGCGCTGGCGAGGAAAAAAGACGAGGGCGAGTCATGA |
| Transcript | >Hirsu2|2041 ATGGGCCAGGGTGCGGCACCAATGAGTGGCTGCATGGCAAGATCGAGCCGCCCGCATCTCTCCGACGAGTCCGGG TTCTTGGTACTGGCGTCGATGCTTGTTCGCTGGCGCTTCGCTCGGCCGCAGGCGCAGGCGCAGGCCGAAAAGGCG CACGAGTGGCGGGCGTTGGTGGTGGACGATGATGGCATGCTCCTCCGATCTCACTGCTCAGCACACGTCTCGGGC GCATGCATGGCTCGATGGAGTCGAGGAGGCAGCGAAGCAGGCGCAGAAGCAGGCGCAGGCGGGCGCACAGGCACG CACAGCTGCACAGGCGCACACATTGTGCGTGGACAGGCAGTATCGCCAGGTCCCTGGAGCCGGTGGCGACGGCCC AATGCAGAGGCAAACGTGCAGGCCGTTGCGCTCCAACGGCCGGCTCGTGGCTGGCTGGGCCCGACAGCGTCGCAG ACGGTTGCCGGCGCATGCAAGACAAGACCAGAGAAGACGGCCGACGATGGCCCGGGCTCGGCGGAAGGGCGACTG GCAATCCAATCGGGCCCCGCCCACCGAGGGGGGATGGGTGTTGTTTATCATTTGGGCTTACACATTGTACATGGT GTGCATGTCACCATGTCGTCTGCCGATGCCGGGACGGCCAACGGCGGCGGCAAAGCTCCCCCAGCGCAGGCCGGC GGCCGTCATCGAGTCAGTGCCGCCCGCCCCCCCCCCCCCCAGCGTCCAGCGCAGGCCGGCAGAGCAGGCAGCAGG AAGCGGGCGCTGGCGAGGAAAAAAGACGAGGGCGAGTCATGA |
| Gene | >Hirsu2|2041 ATGGGCCAGGGTGCGGCACCAATGAGTGGCTGCATGGCAAGATCGAGCCGCCCGCATCTCTCCGACGAGTCCGGG TTCTTGGTACTGGCGTCGATGCTTGTTCGCTGGCGCTTCGCTCGGCCGCAGGCGCAGGCGCAGGCCGAAAGTAGG TATGTACATGTATACATGTGTACATGGCTAGTACGGACTGTACGGTGCAGAGGCGCACGAGTGGCGGGCGTTGGT GGTGGACGATGATGGCATGCTCCTCCGATCTCACTGCTCAGCACACGTCTCGGGCGCATGCATGGCTCGATGGAG TCGAGGAGGCAGCGAAGCAGGCGCAGAAGCAGGCGCAGGCGGGCGCACAGGCACGCACAGCTGCACAGGCGCACA CATTGTGCGTGGACAGGCAGTATCGCCAGGTCCCTGGAGCCGGTGGCGACGGCCCAATGCAGAGGCAAACGTGCA GGCCGTTGCGCTCCAACGGCCGGCTCGTGGCTGGCTGGGCCCGACAGCGTCGCAGACGGTTGCCGGCGCATGCAA GACAAGACCAGAGAAGACGGCCGACGATGGCCCGGGCTCGGCGGAAGGGCGACTGGCAATCCAATCGGGCCCCGC CCACCGAGGGGGGATGGGTGTTGTTTATCATTTGGGCTTACACATTGTACATGGTGTGCATGTGTATGTACATAC GTACGTACTGTACATGTGTGTAGGGAGGGAGTACATATATGTAGGTAGTTGCTATGCATCTATATAGGGGTCGAG GGCATGCTGTACATGACGATGCACTCGACTCATCTACACCCGGACTCAGGCGTCCGCCACCAGAGACTGCCGAGA TTGAGCGCCTCCCGCCTCGCTCTGCCCGTCCGTCCGTCCGTCTCTCTCTCCGCCCGTCCATCCGCCCGCCTCTCT CTCCGCCCGTCCATCCGTCCGTGTCTCTGGCAGCGAGGTCGTGTCGTACGGACTCGTGCCCGCCTGCCAACAGCC CGTCGGCCTTGGCGTCGCACAGATGGCACCCCAACAGGCCGCCGCGTCGACCCAGGACAGACGGCACACACACAC ACACACACACACACACACATACACACACACACATATGTATATATATATCTGCACAGCACCATGTCGTCTGCCGAT GCCGGGACGGCCAACGGCGGCGGCAAAGCTCCCCCAGCGCAGGCCGGCGGCCGTCATCGAGTCAGTGCCGCCCGC CCCCCCCCCCCCCAGCGTCCAGCGCAGGCCGGCAGAGCAGGCAGCAGGAAGCGGGCGCTGGCGAGGAAAAAAGAC GAGGGCGAGTCATGA |