© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2040 |
| Gene name | |
| Location | Contig_1474:3680..6024 |
| Strand | - |
| Gene length (bp) | 2344 |
| Transcript length (bp) | 2007 |
| Coding sequence length (bp) | 2007 |
| Protein length (aa) | 669 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00096 | zf-C2H2 | Zinc finger, C2H2 type | 8.0E-03 | 610 | 635 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8K1S5|KLF11_MOUSE | Krueppel-like factor 11 OS=Mus musculus GN=Klf11 PE=2 SV=3 | 545 | 639 | 4.0E-09 |
| sp|O14901|KLF11_HUMAN | Krueppel-like factor 11 OS=Homo sapiens GN=KLF11 PE=1 SV=2 | 545 | 639 | 2.0E-08 |
| sp|P08047|SP1_HUMAN | Transcription factor Sp1 OS=Homo sapiens GN=SP1 PE=1 SV=3 | 545 | 639 | 4.0E-07 |
| sp|O89090|SP1_MOUSE | Transcription factor Sp1 OS=Mus musculus GN=Sp1 PE=1 SV=2 | 545 | 639 | 5.0E-07 |
| sp|Q01714|SP1_RAT | Transcription factor Sp1 OS=Rattus norvegicus GN=Sp1 PE=1 SV=2 | 545 | 639 | 5.0E-07 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8K1S5|KLF11_MOUSE | Krueppel-like factor 11 OS=Mus musculus GN=Klf11 PE=2 SV=3 | 545 | 639 | 4.0E-09 |
| sp|O14901|KLF11_HUMAN | Krueppel-like factor 11 OS=Homo sapiens GN=KLF11 PE=1 SV=2 | 545 | 639 | 2.0E-08 |
| sp|P08047|SP1_HUMAN | Transcription factor Sp1 OS=Homo sapiens GN=SP1 PE=1 SV=3 | 545 | 639 | 4.0E-07 |
| sp|O89090|SP1_MOUSE | Transcription factor Sp1 OS=Mus musculus GN=Sp1 PE=1 SV=2 | 545 | 639 | 5.0E-07 |
| sp|Q01714|SP1_RAT | Transcription factor Sp1 OS=Rattus norvegicus GN=Sp1 PE=1 SV=2 | 545 | 639 | 5.0E-07 |
| sp|Q09838|PRZ1_SCHPO | Transcriptional regulator prz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=prz1 PE=1 SV=1 | 543 | 633 | 7.0E-07 |
| sp|Q0VA40|SP9_XENTR | Transcription factor Sp9 OS=Xenopus tropicalis GN=sp9 PE=2 SV=1 | 499 | 662 | 1.0E-06 |
| sp|O08876|KLF10_RAT | Krueppel-like factor 10 OS=Rattus norvegicus GN=Klf10 PE=2 SV=1 | 541 | 635 | 2.0E-06 |
| sp|Q8BMJ8|SP8_MOUSE | Transcription factor Sp8 OS=Mus musculus GN=Sp8 PE=2 SV=1 | 421 | 635 | 2.0E-06 |
| sp|Q9YIB7|ZIC2B_XENLA | Zinc finger protein ZIC 2-B OS=Xenopus laevis GN=zic2-b PE=2 SV=1 | 521 | 666 | 2.0E-06 |
| sp|O89091|KLF10_MOUSE | Krueppel-like factor 10 OS=Mus musculus GN=Klf10 PE=1 SV=1 | 541 | 635 | 2.0E-06 |
| sp|Q6NW96|SP9_DANRE | Transcription factor Sp9 OS=Danio rerio GN=sp9 PE=2 SV=1 | 505 | 635 | 2.0E-06 |
| sp|Q5XGT8|SP8_XENLA | Transcription factor Sp8 OS=Xenopus laevis GN=sp8 PE=2 SV=1 | 475 | 635 | 2.0E-06 |
| sp|P0CG40|SP9_HUMAN | Transcription factor Sp9 OS=Homo sapiens GN=SP9 PE=3 SV=1 | 529 | 636 | 4.0E-06 |
| sp|Q64HY3|SP9_MOUSE | Transcription factor Sp9 OS=Mus musculus GN=Sp9 PE=1 SV=1 | 529 | 636 | 4.0E-06 |
| sp|Q9EPW2|KLF15_MOUSE | Krueppel-like factor 15 OS=Mus musculus GN=Klf15 PE=1 SV=1 | 542 | 635 | 5.0E-06 |
| sp|Q6P0J3|SP8_DANRE | Transcription factor Sp8 OS=Danio rerio GN=sp8b PE=2 SV=1 | 529 | 635 | 6.0E-06 |
| sp|Q9UIH9|KLF15_HUMAN | Krueppel-like factor 15 OS=Homo sapiens GN=KLF15 PE=1 SV=1 | 542 | 635 | 7.0E-06 |
| sp|Q13118|KLF10_HUMAN | Krueppel-like factor 10 OS=Homo sapiens GN=KLF10 PE=1 SV=1 | 541 | 635 | 7.0E-06 |
| sp|Q64HY5|SP8_CHICK | Transcription factor Sp8 OS=Gallus gallus GN=SP8 PE=2 SV=1 | 504 | 635 | 8.0E-06 |
| sp|Q8IXZ3|SP8_HUMAN | Transcription factor Sp8 OS=Homo sapiens GN=SP8 PE=2 SV=3 | 421 | 635 | 9.0E-06 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | Nuclear localization signal | 0.5604 | 0.7754 | 0.1772 | 0.1265 | 0.1301 | 0.0239 | 0.1111 | 0.129 | 0.0632 | 0.0138 |
| Transcription Factor Class (based on PFAM domains) |
|---|
| C2H2 zinc finger |
| Orthofinder run ID | 4 |
| Orthogroup | 1921 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2040 MHAGHSCACPSNWPSIIRSRKGAALRRLSRPPPYSTKILISGVQRVHRWHLGPLLLRGTLAISTYHPFYLPGDAP HICFTVRFIRTGEQSIAFLAGHGKPQAIEKYLQRSSAARSTSAPSPFFLFPAYQQHYPSSLHNPSLPGPFPSRCC NPPTLASAASSPPNARYRPLGPWPAEKSSHRKAMTTATRQQQQQPQSFPAADTFDPDEVVPRDSPLMQALRPKLE LSPSPTPDIPPAQIRPSSGDAVLVSYLDNGRHPDIARAAGAQALPGVDDDGDGDAGPRPGSSNTGPCTAVCGPDG SQTPHRAITTPILQNMAADALQAVSAETPSIPPLRETPDISASTRQLSISDGRSCKSTTYSSSTHTSRPSVQLKT GAKSPTPALTPACGELPPLQMVSPKSESNGQSLPSIRSTFGDIKHIPSELRTPADTDLTPMSGATAAFSRSPSGA RPRLPLMSATHVSPPISPSEAYQRSLPSPHSLPASSPFGFYQTNGLGQRPNTEFIGTATAETPSTDQSASTPATS ASVADRMSIDGLTNPQVGVYVCNFSGCSAPPFQTQYLLNSHANVHSSARPHYCPVKGCPRSEGGKGFKRKNEMIR HGLVHDSPGYVCPFCPDREHKYPRPDNLQRHVRVHHVDKDKDDPLLREVLSQRPDGPSRGRRRRGVAA* |
| Coding | >Hirsu2|2040 ATGCACGCCGGGCACTCCTGCGCCTGTCCTTCAAACTGGCCGAGCATTATCCGCTCCCGCAAGGGCGCTGCACTG CGACGTCTGTCCCGACCGCCGCCCTATTCCACCAAAATTCTCATCTCAGGTGTGCAACGAGTACACCGTTGGCAC CTAGGGCCCTTGCTGCTCCGAGGCACGCTCGCCATATCTACATATCATCCGTTCTATCTACCCGGAGACGCCCCC CACATTTGCTTTACAGTCCGATTCATTCGCACGGGCGAGCAATCCATCGCGTTTCTTGCCGGCCACGGCAAGCCC CAAGCCATTGAAAAATATTTACAACGGTCATCTGCCGCACGATCGACTTCCGCACCTTCGCCCTTCTTCCTCTTC CCCGCCTATCAGCAGCATTACCCCTCTAGTCTTCATAACCCGTCGTTGCCCGGCCCATTTCCGTCGCGCTGCTGC AACCCGCCTACTCTTGCCAGCGCTGCGTCGAGCCCCCCAAACGCCAGATACCGGCCTCTTGGGCCATGGCCGGCT GAGAAGTCCTCGCATCGGAAAGCTATGACGACAGCCACGCGACAGCAGCAGCAGCAGCCCCAATCCTTCCCGGCT GCCGACACATTTGACCCAGATGAAGTAGTCCCGCGGGACAGTCCCCTCATGCAAGCGCTACGTCCAAAACTCGAA CTGTCACCGAGCCCGACGCCGGACATCCCTCCGGCACAAATTCGTCCCAGCTCCGGGGATGCCGTGCTCGTTTCT TATCTCGACAATGGCCGCCATCCCGACATCGCCCGTGCCGCCGGAGCGCAGGCTTTGCCTGGCGTTGACGATGAC GGGGACGGCGACGCTGGCCCGCGACCTGGCTCCTCCAACACTGGACCTTGCACGGCTGTCTGCGGCCCTGATGGC TCGCAAACTCCCCATAGGGCAATAACGACCCCGATCCTGCAAAATATGGCTGCCGACGCTCTGCAAGCAGTTTCT GCGGAAACGCCGTCAATCCCGCCTTTGAGGGAGACACCGGATATTTCCGCTTCGACTCGCCAGTTGTCCATCAGC GATGGGCGATCTTGTAAAAGTACAACGTACTCCTCTTCCACGCATACGAGTAGACCTTCTGTTCAACTCAAGACG GGGGCCAAATCACCTACACCGGCGTTGACGCCTGCTTGTGGCGAGCTACCCCCCCTCCAGATGGTGTCTCCCAAA TCGGAGTCAAACGGTCAAAGCCTGCCCTCCATACGGTCTACCTTCGGCGATATCAAACACATACCTTCTGAGCTG CGGACACCGGCTGATACAGATTTGACGCCTATGTCCGGCGCGACGGCGGCCTTTTCGCGGTCCCCATCAGGCGCT AGACCACGGTTGCCTCTAATGTCAGCCACGCATGTCTCGCCTCCAATATCACCAAGCGAAGCTTATCAACGCAGC CTGCCATCACCGCACTCATTGCCAGCTTCAAGCCCCTTCGGCTTCTACCAGACAAACGGGCTGGGCCAGCGGCCT AATACTGAATTCATTGGCACCGCAACGGCCGAGACGCCCAGTACGGACCAATCTGCCTCAACGCCCGCCACTTCC GCGTCGGTAGCAGATCGGATGAGTATCGACGGTCTCACCAATCCGCAAGTCGGTGTGTACGTTTGCAACTTCTCG GGTTGCTCGGCCCCCCCGTTCCAAACTCAGTATCTTCTCAACTCTCATGCAAACGTCCACTCATCCGCGCGCCCT CATTATTGTCCAGTCAAGGGATGTCCCCGAAGTGAGGGAGGCAAGGGATTCAAGCGGAAAAATGAAATGATCAGG CATGGGCTGGTCCACGATTCGCCGGGCTATGTGTGCCCTTTCTGTCCAGATAGAGAACACAAATACCCTCGACCC GATAATCTCCAAAGACATGTTCGTGTCCATCACGTCGACAAGGACAAGGACGACCCCTTGCTGCGCGAGGTTCTG TCTCAAAGGCCCGATGGTCCAAGCCGGGGTCGCCGAAGACGAGGCGTCGCCGCCTAG |
| Transcript | >Hirsu2|2040 ATGCACGCCGGGCACTCCTGCGCCTGTCCTTCAAACTGGCCGAGCATTATCCGCTCCCGCAAGGGCGCTGCACTG CGACGTCTGTCCCGACCGCCGCCCTATTCCACCAAAATTCTCATCTCAGGTGTGCAACGAGTACACCGTTGGCAC CTAGGGCCCTTGCTGCTCCGAGGCACGCTCGCCATATCTACATATCATCCGTTCTATCTACCCGGAGACGCCCCC CACATTTGCTTTACAGTCCGATTCATTCGCACGGGCGAGCAATCCATCGCGTTTCTTGCCGGCCACGGCAAGCCC CAAGCCATTGAAAAATATTTACAACGGTCATCTGCCGCACGATCGACTTCCGCACCTTCGCCCTTCTTCCTCTTC CCCGCCTATCAGCAGCATTACCCCTCTAGTCTTCATAACCCGTCGTTGCCCGGCCCATTTCCGTCGCGCTGCTGC AACCCGCCTACTCTTGCCAGCGCTGCGTCGAGCCCCCCAAACGCCAGATACCGGCCTCTTGGGCCATGGCCGGCT GAGAAGTCCTCGCATCGGAAAGCTATGACGACAGCCACGCGACAGCAGCAGCAGCAGCCCCAATCCTTCCCGGCT GCCGACACATTTGACCCAGATGAAGTAGTCCCGCGGGACAGTCCCCTCATGCAAGCGCTACGTCCAAAACTCGAA CTGTCACCGAGCCCGACGCCGGACATCCCTCCGGCACAAATTCGTCCCAGCTCCGGGGATGCCGTGCTCGTTTCT TATCTCGACAATGGCCGCCATCCCGACATCGCCCGTGCCGCCGGAGCGCAGGCTTTGCCTGGCGTTGACGATGAC GGGGACGGCGACGCTGGCCCGCGACCTGGCTCCTCCAACACTGGACCTTGCACGGCTGTCTGCGGCCCTGATGGC TCGCAAACTCCCCATAGGGCAATAACGACCCCGATCCTGCAAAATATGGCTGCCGACGCTCTGCAAGCAGTTTCT GCGGAAACGCCGTCAATCCCGCCTTTGAGGGAGACACCGGATATTTCCGCTTCGACTCGCCAGTTGTCCATCAGC GATGGGCGATCTTGTAAAAGTACAACGTACTCCTCTTCCACGCATACGAGTAGACCTTCTGTTCAACTCAAGACG GGGGCCAAATCACCTACACCGGCGTTGACGCCTGCTTGTGGCGAGCTACCCCCCCTCCAGATGGTGTCTCCCAAA TCGGAGTCAAACGGTCAAAGCCTGCCCTCCATACGGTCTACCTTCGGCGATATCAAACACATACCTTCTGAGCTG CGGACACCGGCTGATACAGATTTGACGCCTATGTCCGGCGCGACGGCGGCCTTTTCGCGGTCCCCATCAGGCGCT AGACCACGGTTGCCTCTAATGTCAGCCACGCATGTCTCGCCTCCAATATCACCAAGCGAAGCTTATCAACGCAGC CTGCCATCACCGCACTCATTGCCAGCTTCAAGCCCCTTCGGCTTCTACCAGACAAACGGGCTGGGCCAGCGGCCT AATACTGAATTCATTGGCACCGCAACGGCCGAGACGCCCAGTACGGACCAATCTGCCTCAACGCCCGCCACTTCC GCGTCGGTAGCAGATCGGATGAGTATCGACGGTCTCACCAATCCGCAAGTCGGTGTGTACGTTTGCAACTTCTCG GGTTGCTCGGCCCCCCCGTTCCAAACTCAGTATCTTCTCAACTCTCATGCAAACGTCCACTCATCCGCGCGCCCT CATTATTGTCCAGTCAAGGGATGTCCCCGAAGTGAGGGAGGCAAGGGATTCAAGCGGAAAAATGAAATGATCAGG CATGGGCTGGTCCACGATTCGCCGGGCTATGTGTGCCCTTTCTGTCCAGATAGAGAACACAAATACCCTCGACCC GATAATCTCCAAAGACATGTTCGTGTCCATCACGTCGACAAGGACAAGGACGACCCCTTGCTGCGCGAGGTTCTG TCTCAAAGGCCCGATGGTCCAAGCCGGGGTCGCCGAAGACGAGGCGTCGCCGCCTAG |
| Gene | >Hirsu2|2040 ATGCACGCCGGGCACTCCTGCGCCTGTCCTTCAAACTGGCCGAGCATTATCCGCTCCCGCAAGGGCGCTGCACTG CGACGTCTGTCCCGACCGCCGCCCTATTCCACCAAAATTCTCATCTCAGGTGTGCAACGAGTACACCGTTGGCAC CTAGGTAGGCGAGTCGACCCTCCGTCTCCACGGCTCGCAGCCCATCGGCACTTCCCGGCCTTCTCCACGCCGATC CGTCGCCAACAGCAACACGACATCCTTCTCTCCAAGCTAGGCCCTTAACAACCAAACCCCCCCCCTCTTTTTCAT CCTTTTATATTCCTTGATTCGCCCTGCGAAAGCGTGCCATTCAGCTGCGCATAGCTGCGAGCAGCTGCCTTCGGT CTTTTAGGGCCCTTGCTGCTCCGAGGCACGCTCGCCATATCTACATATCATCCGTTCTATCTACCCGGAGACGCC CCCCACATTTGCTTTACAGTCCGATTCATTCGCACGGGCGAGCAATCCATCGCGTTTCTTGCCGGCCACGGCAAG CCCCAAGCCATTGAAAAATATTTACAACGGTCATCTGCCGCACGATCGACTTCCGCACCTTCGCCCTTCTTCCTC TTCCCCGCCTATCAGCAGCATTACCCCTCTAGTCTTCATAACCCGTCGTTGCCCGGCCCATTTCCGTCGCGCTGC TGCAACCCGCCTACTCTTGCCAGCGCTGCGTCGAGCCCCCCAAACGCCAGATACCGGCCTCTTGGGCCATGGCCG GCTGAGAAGTCCTCGCATCGGAAAGCTATGACGACAGCCACGCGACAGCAGCAGCAGCAGCCCCAATCCTTCCCG GCTGCCGACACATTTGACCCAGATGAAGTAGTCCCGCGGGACAGTCCCCTCATGCAAGCGCTACGTCCAAAACTC GAACTGTCACCGAGCCCGACGCCGGACATCCCTCCGGCACAAGTCAGTCTGAGCCCTTCTCCCACTGACGGCCAC TCCAACTCTAATCGGTCCAAGATTCGTCCCAGCTCCGGGGATGCCGTGCTCGTTTCTTATCTCGACAATGGCCGC CATCCCGACATCGCCCGTGCCGCCGGAGCGCAGGCTTTGCCTGGCGTTGACGATGACGGGGACGGCGACGCTGGC CCGCGACCTGGCTCCTCCAACACTGGACCTTGCACGGCTGTCTGCGGCCCTGATGGCTCGCAAACTCCCCATAGG GCAATAACGACCCCGATCCTGCAAAATATGGCTGCCGACGCTCTGCAAGCAGTTTCTGCGGAAACGCCGTCAATC CCGCCTTTGAGGGAGACACCGGATATTTCCGCTTCGACTCGCCAGTTGTCCATCAGCGATGGGCGATCTTGTAAA AGTACAACGTACTCCTCTTCCACGCATACGAGTAGACCTTCTGTTCAACTCAAGACGGGGGCCAAATCACCTACA CCGGCGTTGACGCCTGCTTGTGGCGAGCTACCCCCCCTCCAGATGGTGTCTCCCAAATCGGAGTCAAACGGTCAA AGCCTGCCCTCCATACGGTCTACCTTCGGCGATATCAAACACATACCTTCTGAGCTGCGGACACCGGCTGATACA GATTTGACGCCTATGTCCGGCGCGACGGCGGCCTTTTCGCGGTCCCCATCAGGCGCTAGACCACGGTTGCCTCTA ATGTCAGCCACGCATGTCTCGCCTCCAATATCACCAAGCGAAGCTTATCAACGCAGCCTGCCATCACCGCACTCA TTGCCAGCTTCAAGCCCCTTCGGCTTCTACCAGACAAACGGGCTGGGCCAGCGGCCTAATACTGAATTCATTGGC ACCGCAACGGCCGAGACGCCCAGTACGGACCAATCTGCCTCAACGCCCGCCACTTCCGCGTCGGTAGCAGATCGG ATGAGTATCGACGGTCTCACCAATCCGCAAGTCGGTGTGTACGTTTGCAACTTCTCGGGTTGCTCGGCCCCCCCG TTCCAAACTCAGTATCTTCTCAACTCTCATGCAAACGTCCACTCATCCGCGCGCCCTCATTATTGTCCAGTCAAG GGATGTCCCCGAAGTGAGGGAGGCAAGGGATTCAAGCGGAAAAATGAAATGATCAGGCATGGGCTGGTCCACGAT TCGCCGGGCTATGTGTGCCCTTTCTGTCCAGATAGAGAACACAAATACCCTCGACCCGATAATCTCCAAAGGTGT GCTCAGGCCTGTGATGATGCCGGGGTAAGGAAGGCTGACGTTGTACCCTAGACATGTTCGTGTCCATCACGTCGA CAAGGACAAGGACGACCCCTTGCTGCGCGAGGTTCTGTCTCAAAGGCCCGATGGTCCAAGCCGGGGTCGCCGAAG ACGAGGCGTCGCCGCCTAG |