© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|204 |
| Gene name | |
| Location | Contig_1035:1..1279 |
| Strand | - |
| Gene length (bp) | 1278 |
| Transcript length (bp) | 759 |
| Coding sequence length (bp) | 759 |
| Protein length (aa) | 253 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.6771 | 0.3045 | 0.053 | 0.4221 | 0.2969 | 0.0078 | 0.1511 | 0.2494 | 0.0953 | 0.0566 |
| Orthofinder run ID | 4 |
| Orthogroup | 8966 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|204 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|204 MAGEPTSGSGQASDVPTPNRKPKKRQQQQQLTVPLIAEPPAAATPKTPRPALRRNTSYDAPEEREKADWAEQRAT QRQLRSMTDARQRADRLAISVGSYSGQGSRRNSNDFDVSFQPLIDDSDDLDKGPADDAVTATEVRPAHDHHHHVK PRTRTPHSRRRNGSLQDDQAVAETLVRSYTVRDRGRDLYQRNQSSSGTHTPVSQQEYTQDYVPRPSKYRGGILSS LLRLNNDERGAGAGSSSSGAPSTRRRR* |
| Coding | >Hirsu2|204 ATGGCAGGAGAACCAACCAGCGGCAGCGGCCAGGCTAGCGACGTGCCAACGCCGAACCGCAAGCCCAAGAAGCGC CAGCAGCAGCAGCAACTGACCGTCCCCCTCATAGCGGAACCGCCCGCCGCCGCCACGCCCAAGACCCCGAGGCCG GCTCTGAGACGCAACACAAGCTATGACGCCCCCGAGGAACGTGAAAAGGCGGACTGGGCAGAGCAACGGGCCACC CAGCGCCAGCTCCGCTCCATGACTGACGCACGCCAACGTGCGGATCGATTGGCCATCTCGGTCGGGAGCTACTCT GGCCAGGGCTCGAGGCGCAACTCGAACGACTTTGACGTCTCATTCCAGCCCCTGATCGATGATTCAGATGATCTG GACAAGGGCCCGGCCGACGATGCCGTCACTGCCACGGAGGTCAGGCCGGCCCACGACCATCACCACCACGTCAAG CCTCGCACCCGCACACCCCACAGCCGTCGCCGCAACGGCTCCTTGCAAGACGACCAGGCCGTGGCAGAGACTCTC GTCCGGTCTTACACCGTCCGGGACAGGGGCAGAGACCTCTACCAGCGCAACCAGTCGTCGTCGGGCACCCACACG CCCGTCAGCCAGCAGGAATATACACAAGACTACGTCCCCCGCCCGTCCAAGTACCGCGGCGGCATCCTCTCCTCC CTGCTCCGGCTCAACAACGATGAGAGAGGCGCCGGCGCCGGCAGCAGCAGCAGCGGCGCGCCCTCAACTCGACGA CGTCGCTGA |
| Transcript | >Hirsu2|204 ATGGCAGGAGAACCAACCAGCGGCAGCGGCCAGGCTAGCGACGTGCCAACGCCGAACCGCAAGCCCAAGAAGCGC CAGCAGCAGCAGCAACTGACCGTCCCCCTCATAGCGGAACCGCCCGCCGCCGCCACGCCCAAGACCCCGAGGCCG GCTCTGAGACGCAACACAAGCTATGACGCCCCCGAGGAACGTGAAAAGGCGGACTGGGCAGAGCAACGGGCCACC CAGCGCCAGCTCCGCTCCATGACTGACGCACGCCAACGTGCGGATCGATTGGCCATCTCGGTCGGGAGCTACTCT GGCCAGGGCTCGAGGCGCAACTCGAACGACTTTGACGTCTCATTCCAGCCCCTGATCGATGATTCAGATGATCTG GACAAGGGCCCGGCCGACGATGCCGTCACTGCCACGGAGGTCAGGCCGGCCCACGACCATCACCACCACGTCAAG CCTCGCACCCGCACACCCCACAGCCGTCGCCGCAACGGCTCCTTGCAAGACGACCAGGCCGTGGCAGAGACTCTC GTCCGGTCTTACACCGTCCGGGACAGGGGCAGAGACCTCTACCAGCGCAACCAGTCGTCGTCGGGCACCCACACG CCCGTCAGCCAGCAGGAATATACACAAGACTACGTCCCCCGCCCGTCCAAGTACCGCGGCGGCATCCTCTCCTCC CTGCTCCGGCTCAACAACGATGAGAGAGGCGCCGGCGCCGGCAGCAGCAGCAGCGGCGCGCCCTCAACTCGACGA CGTCGCTGA |
| Gene | >Hirsu2|204 ATGGCAGGAGAACCAACCAGCGGCAGCGGCCAGGCTAGCGACGTGCCAACGCCGAACCGCAAGCCCAAGAAGCGC GTGGGCTGGCACTCGAGCAGCAACAGCGGCGGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNGCAGCAGCAGCAGCAGCAACTGACCGTCCCCCTCATAGCGGAACCGCCCGCCGCCGCCACGC CCAAGACCCCGAGGCCGGCTCTGAGACGCAACACAAGCTATGACGCCCCCGAGGAACGTGAAAAGGCGGACTGGG CAGAGCAACGGGCCACCCAGCGCCAGCTCCGCTCCATGACTGACGCACGCCAACGTGCGGATCGATTGGCCATCT CGGTCGGGAGCTACTCTGGCCAGGGCTCGAGGCGCAACTCGAACGACTTTGACGTCTCATTCCAGCCCCTGATCG ATGATTCAGATGATCTGGACAAGGGCCCGGCCGACGATGCCGTCACTGCCACGGAGGTCAGGCCGGCCCACGACC ATCACCACCACGTCAAGCCTCGCACCCGCACACCCCACAGCCGTCGCCGCAACGGCTCCTTGCAAGACGACCAGG CCGTGGCAGAGACTCTCGTCCGGTCTTACACCGTCCGGGACAGGGGCAGAGACCTCTACCAGCGCAACCAGTCGT CGTCGGGCACCCACACGCCCGTCAGCCAGCAGGAATATACACAAGACTACGTCCCCCGCCCGTCCAAGTACCGCG GCGGCATCCTCTCCTCCCTGCTCCGGCTCAACAACGATGAGAGAGGCGCCGGCGCCGGCAGCAGCAGCAGCGGGT ACAACACTCCCACGACGCCAGCAACGCCCTCCATGTCGCCGCGCTCCTCGCCCCCGCCGTCGCGGCCGGCCTCGA CCGCCGGCGGGCCGCGCACGCGCGCCGCCAGCGGCCTCTTCAGCAGCCAGCGCGCCCTCAACTCGACGACGTCGC TGA |