© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2036 |
| Gene name | |
| Location | Contig_1473:1177..2554 |
| Strand | - |
| Gene length (bp) | 1377 |
| Transcript length (bp) | 1053 |
| Coding sequence length (bp) | 1053 |
| Protein length (aa) | 351 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.2E-28 | 95 | 342 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 6.5E-07 | 102 | 275 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10084|MFS2_SCHPO | Uncharacterized transporter mfs2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mfs2 PE=3 SV=1 | 8 | 348 | 1.0E-48 |
| sp|Q06451|TPO3_YEAST | Polyamine transporter 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO3 PE=1 SV=1 | 13 | 350 | 4.0E-46 |
| sp|P53283|TPO2_YEAST | Polyamine transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO2 PE=1 SV=1 | 65 | 350 | 9.0E-45 |
| sp|Q07824|TPO1_YEAST | Polyamine transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO1 PE=1 SV=1 | 26 | 350 | 1.0E-42 |
| sp|O59738|YN22_SCHPO | Uncharacterized transporter C530.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC530.02 PE=3 SV=1 | 61 | 348 | 2.0E-42 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10084|MFS2_SCHPO | Uncharacterized transporter mfs2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mfs2 PE=3 SV=1 | 8 | 348 | 1.0E-48 |
| sp|Q06451|TPO3_YEAST | Polyamine transporter 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO3 PE=1 SV=1 | 13 | 350 | 4.0E-46 |
| sp|P53283|TPO2_YEAST | Polyamine transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO2 PE=1 SV=1 | 65 | 350 | 9.0E-45 |
| sp|Q07824|TPO1_YEAST | Polyamine transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO1 PE=1 SV=1 | 26 | 350 | 1.0E-42 |
| sp|O59738|YN22_SCHPO | Uncharacterized transporter C530.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC530.02 PE=3 SV=1 | 61 | 348 | 2.0E-42 |
| sp|O59814|YCT4_SCHPO | Uncharacterized transporter C794.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.04c PE=3 SV=1 | 14 | 348 | 3.0E-39 |
| sp|Q9P3E8|YLZ2_SCHPO | Uncharacterized transporter C750.02c/PB2B2.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC750.02c PE=3 SV=1 | 75 | 344 | 5.0E-39 |
| sp|Q9P3V5|YI45_SCHPO | Uncharacterized transporter C1348.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1348.05 PE=3 SV=1 | 75 | 344 | 5.0E-39 |
| sp|P38124|FLR1_YEAST | Fluconazole resistance protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLR1 PE=1 SV=1 | 75 | 345 | 8.0E-39 |
| sp|Q5ABU7|MDR1_CANAL | Multidrug resistance protein 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MDR1 PE=1 SV=1 | 73 | 345 | 2.0E-38 |
| sp|P28873|BMRP_CANAX | Benomyl/methotrexate resistance protein OS=Candida albicans GN=MDR1 PE=3 SV=1 | 73 | 345 | 2.0E-38 |
| sp|Q7Z9I0|YHA8_SCHPO | Uncharacterized MFS-type transporter C409.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC409.08 PE=3 SV=1 | 72 | 350 | 3.0E-38 |
| sp|O94528|CAF5_SCHPO | Caffeine resistance protein 5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=caf5 PE=3 SV=1 | 72 | 347 | 2.0E-37 |
| sp|Q12256|TPO4_YEAST | Polyamine transporter 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO4 PE=1 SV=1 | 75 | 345 | 3.0E-37 |
| sp|P32071|CYHR_CANMA | Cycloheximide resistance protein OS=Candida maltosa GN=CYHR PE=3 SV=1 | 73 | 346 | 3.0E-36 |
| sp|O59700|YN43_SCHPO | Uncharacterized transporter C36.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC36.03c PE=3 SV=1 | 67 | 349 | 5.0E-36 |
| sp|Q9USN4|YJA1_SCHPO | Uncharacterized transporter C1529.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1529.01 PE=3 SV=2 | 75 | 348 | 3.0E-35 |
| sp|P38776|YHK8_YEAST | Probable drug/proton antiporter YHK8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHK8 PE=1 SV=1 | 94 | 347 | 5.0E-35 |
| sp|Q10487|MFS1_SCHPO | Transporter mfs1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mfs1 PE=3 SV=1 | 73 | 346 | 5.0E-35 |
| sp|Q9Y7S4|YQO5_SCHPO | Uncharacterized transporter C569.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC569.05c PE=3 SV=1 | 71 | 349 | 9.0E-34 |
| sp|O59699|YN42_SCHPO | Uncharacterized transporter C36.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC36.02c PE=3 SV=1 | 78 | 349 | 1.0E-31 |
| sp|O59698|YN41_SCHPO | Uncharacterized transporter C36.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC36.01c PE=1 SV=1 | 115 | 349 | 3.0E-31 |
| sp|O74829|YN2F_SCHPO | Uncharacterized MFS-type transporter C530.15c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC530.15c PE=1 SV=2 | 60 | 349 | 5.0E-31 |
| sp|Q9HDX4|MFC1_SCHPO | Uncharacterized transporter mfc1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mfc1 PE=3 SV=2 | 75 | 349 | 1.0E-29 |
| sp|O43081|YHS6_SCHPO | Uncharacterized MFS-type transporter C947.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC947.06c PE=3 SV=1 | 66 | 350 | 4.0E-29 |
| sp|P33532|BSU1_SCHPO | Vitamin B6 transporter bsu1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bsu1 PE=3 SV=2 | 28 | 349 | 1.0E-20 |
| sp|Q59XM0|QDR3_CANAL | MFS antiporter QDR3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=QDR3 PE=2 SV=1 | 75 | 274 | 2.0E-16 |
| sp|O74899|YQEH_SCHPO | Uncharacterized transporter C576.17c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC576.17c PE=1 SV=1 | 2 | 349 | 3.0E-16 |
| sp|P38125|DTR1_YEAST | Dityrosine transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DTR1 PE=1 SV=1 | 108 | 296 | 3.0E-16 |
| sp|P38227|QDR3_YEAST | Quinidine resistance protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QDR3 PE=1 SV=2 | 64 | 278 | 4.0E-15 |
| sp|O59833|YCUD_SCHPO | Uncharacterized transporter C965.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC965.13 PE=3 SV=1 | 128 | 349 | 1.0E-13 |
| sp|O94343|YHMA_SCHPO | Uncharacterized MFS-type transporter C1271.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1271.10c PE=1 SV=1 | 40 | 282 | 6.0E-10 |
| sp|P28246|BCR_ECOLI | Bicyclomycin resistance protein OS=Escherichia coli (strain K12) GN=bcr PE=1 SV=4 | 108 | 302 | 1.0E-09 |
| sp|P53389|HOL1_YEAST | Protein HOL1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HOL1 PE=1 SV=1 | 105 | 267 | 3.0E-09 |
| sp|P9WG89|EMRB_MYCTU | Multidrug resistance protein B homolog OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=emrB PE=3 SV=1 | 84 | 244 | 9.0E-09 |
| sp|P9WG88|EMRB_MYCTO | Multidrug resistance protein B homolog OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=emrB PE=3 SV=1 | 84 | 244 | 1.0E-08 |
| sp|P39886|TCMA_STRGA | Tetracenomycin C resistance and export protein OS=Streptomyces glaucescens GN=tcmA PE=3 SV=1 | 73 | 243 | 5.0E-08 |
| sp|P96709|YDGK_BACSU | Uncharacterized MFS-type transporter YdgK OS=Bacillus subtilis (strain 168) GN=ydgK PE=3 SV=1 | 108 | 253 | 1.0E-07 |
| sp|O31563|YFIU_BACSU | Uncharacterized MFS-type transporter YfiU OS=Bacillus subtilis (strain 168) GN=yfiU PE=3 SV=1 | 85 | 277 | 3.0E-07 |
| sp|P45123|BCR_HAEIN | Bicyclomycin resistance protein homolog OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=bcr PE=3 SV=1 | 108 | 297 | 2.0E-06 |
| sp|P46105|ACT22_STRCO | Probable actinorhodin transporter OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=actII-2 PE=3 SV=1 | 73 | 269 | 2.0E-06 |
| sp|P54585|YHCA_BACSU | Uncharacterized MFS-type transporter YhcA OS=Bacillus subtilis (strain 168) GN=yhcA PE=3 SV=2 | 72 | 243 | 3.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cell membrane | Signal peptide|Transmembrane domain | 0.1701 | 0.1129 | 0.128 | 0.4775 | 0.087 | 0.0122 | 0.4363 | 0.334 | 0.2473 | 0.0115 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 88 | 110 | 22 |
| 2 | 130 | 152 | 22 |
| 3 | 173 | 195 | 22 |
| 4 | 215 | 237 | 22 |
| 5 | 244 | 263 | 19 |
| 6 | 323 | 345 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 743 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2036 MSDVVRARSPSARPSQTSGEAAAAIQDDQDEADATPESLPVGAARPTPASLPHSGIAASIASRLPDFEVILEDGD ADNPKSWPIRYRGWCIVAVSLSTWVVTLLSTSYSASLTGLADEFGATTTLVALGMTTYLLGLAVGTLILAPMGEL YGRRVVYIVCLSSWALLNVPCGLAHSLTAIIVIRFFGACLGAVTISNGPGTVVDVSHPEYLARAMSLFGFAPFNG PVTAPIIGGFVFQYMGWRWANWIVLIIAGVCIALVLTVEETYAPTILKRKAARLRRQTGDPRWWCRYDQRRVSTL QLLRVNLSRPFILFATEPILWFMNLWISIAYSILYFCFIAYPVVFSQHRG* |
| Coding | >Hirsu2|2036 ATGTCGGACGTAGTTCGTGCCCGCAGCCCTTCGGCGAGGCCGAGCCAGACGTCTGGAGAAGCAGCGGCAGCGATC CAAGACGACCAAGATGAAGCCGACGCGACTCCCGAAAGCCTGCCCGTCGGGGCAGCACGCCCCACTCCCGCATCC CTCCCTCACTCCGGGATTGCTGCCAGCATTGCCTCTCGCCTTCCCGATTTCGAAGTGATCCTGGAGGATGGCGAT GCCGACAACCCCAAAAGCTGGCCGATCAGGTATCGCGGCTGGTGCATTGTGGCCGTCTCCCTTTCGACCTGGGTC GTCACCCTTCTCAGCACCAGCTACAGTGCCTCGCTCACCGGCCTCGCCGACGAGTTTGGCGCCACGACGACCCTC GTCGCGCTCGGCATGACCACCTATCTGCTCGGCCTAGCAGTCGGCACCCTTATTTTGGCCCCCATGGGCGAGCTC TACGGCCGCCGCGTGGTCTACATCGTCTGCCTGTCCTCTTGGGCACTTTTGAATGTTCCTTGCGGCCTCGCCCAC TCCTTGACGGCAATCATTGTCATCCGCTTCTTTGGGGCCTGTCTCGGCGCCGTCACCATATCCAATGGCCCCGGC ACTGTCGTCGACGTCTCACACCCCGAATACCTTGCCAGGGCTATGTCGCTCTTCGGCTTCGCCCCATTCAACGGC CCCGTCACGGCACCCATCATCGGCGGCTTTGTCTTCCAGTACATGGGATGGCGATGGGCCAACTGGATCGTCCTG ATCATCGCGGGCGTCTGTATCGCTCTCGTACTGACGGTCGAAGAGACGTACGCGCCCACGATTTTGAAGCGCAAG GCCGCGCGGCTGCGGAGGCAGACGGGCGATCCCAGATGGTGGTGTCGGTACGACCAACGGAGAGTCTCGACTCTG CAACTGCTTCGAGTGAACTTGAGCCGGCCTTTTATCCTGTTCGCCACAGAGCCCATTCTGTGGTTCATGAATCTC TGGATCTCCATCGCCTACAGCATCTTGTACTTCTGCTTCATAGCCTACCCTGTTGTCTTCTCCCAACATCGAGGA TAG |
| Transcript | >Hirsu2|2036 ATGTCGGACGTAGTTCGTGCCCGCAGCCCTTCGGCGAGGCCGAGCCAGACGTCTGGAGAAGCAGCGGCAGCGATC CAAGACGACCAAGATGAAGCCGACGCGACTCCCGAAAGCCTGCCCGTCGGGGCAGCACGCCCCACTCCCGCATCC CTCCCTCACTCCGGGATTGCTGCCAGCATTGCCTCTCGCCTTCCCGATTTCGAAGTGATCCTGGAGGATGGCGAT GCCGACAACCCCAAAAGCTGGCCGATCAGGTATCGCGGCTGGTGCATTGTGGCCGTCTCCCTTTCGACCTGGGTC GTCACCCTTCTCAGCACCAGCTACAGTGCCTCGCTCACCGGCCTCGCCGACGAGTTTGGCGCCACGACGACCCTC GTCGCGCTCGGCATGACCACCTATCTGCTCGGCCTAGCAGTCGGCACCCTTATTTTGGCCCCCATGGGCGAGCTC TACGGCCGCCGCGTGGTCTACATCGTCTGCCTGTCCTCTTGGGCACTTTTGAATGTTCCTTGCGGCCTCGCCCAC TCCTTGACGGCAATCATTGTCATCCGCTTCTTTGGGGCCTGTCTCGGCGCCGTCACCATATCCAATGGCCCCGGC ACTGTCGTCGACGTCTCACACCCCGAATACCTTGCCAGGGCTATGTCGCTCTTCGGCTTCGCCCCATTCAACGGC CCCGTCACGGCACCCATCATCGGCGGCTTTGTCTTCCAGTACATGGGATGGCGATGGGCCAACTGGATCGTCCTG ATCATCGCGGGCGTCTGTATCGCTCTCGTACTGACGGTCGAAGAGACGTACGCGCCCACGATTTTGAAGCGCAAG GCCGCGCGGCTGCGGAGGCAGACGGGCGATCCCAGATGGTGGTGTCGGTACGACCAACGGAGAGTCTCGACTCTG CAACTGCTTCGAGTGAACTTGAGCCGGCCTTTTATCCTGTTCGCCACAGAGCCCATTCTGTGGTTCATGAATCTC TGGATCTCCATCGCCTACAGCATCTTGTACTTCTGCTTCATAGCCTACCCTGTTGTCTTCTCCCAACATCGAGGA TAG |
| Gene | >Hirsu2|2036 ATGTCGGACGTAGTTCGTGCCCGCAGCCCTTCGGCGAGGCCGAGCCAGACGTCTGGAGAAGCAGCGGCAGCGATC CAAGACGACCAAGATGAAGCCGACGCGACTCCCGAAAGCCTGCCCGTCGGGGCAGCACGCCCCACTCCCGCATCC CTCCCTCACTCCGGGATTGCTGCCAGCATTGCCTCTCGCCTTCCCGATTTCGAAGTGATCCTGGAGGATGGCGAT GCCGACAACCCCAAAAGCTGGCCGATCAGGTATCGCGGCTGGTGCATTGTGGCCGTCTCCCTTTCGACCTGGGTC GTCACCCTTCTCAGCACCAGCTACAGTGCCTCGCTCACCGGCCTCGCCGACGAGTTTGGCGCCACGACGACCCTC GTCGCGCTCGGCATGACCACCTATCTGCTCGGCCTAGCAGTCGGCACCCTTATTTTGGCCCCCATGGGCGAGCTC TACGGCCGCCGCGTGGTCTACATCGTCTGCCTGTCCTCTTGGGCACTTTTGAATGTTCCTTGCGGCCTCGCCCAC TCCTTGACGGCAATCATTGTCATCCGCTTCTTTGGGTGAGTGGCTCTTCTTTCCGGATCCCTATTCTCCGCGTTT CCTCCTGAAATGCCGTGTCTGTACTCGGACTTCGTCTCGGTGTGATTCGGAGAGCGCCAAAAGCCATTCTAACCC CCCTCCCACGCTCTTACCTGCCTCACACCCGTTTACGCCCTGTTTGACCGAGGGGAGATGGCAGGGCCTGTCTCG GCGCCGTCACCATATCCAATGGCCCCGGCACTGTCGTCGACGTCTCACACCCCGAATACCTTGCCAGGGCTATGT CGCTCTTCGGCTTCGCCCCATTCAACGGCCCCGTCACGGCACCCATCATCGGCGGCTTTGTCTTCCAGTACATGG GATGGCGATGGGCCAACTGGATCGTCCTGATCATCGCGGGCGTCTGTATCGCTCTCGTACTGACGGTCGAAGAGA CGTACGCGCCCACGATTTTGAAGCGCAAGGCCGCGCGGCTGCGGAGGCAGACGGGCGATCCCAGATGGTGGTGTC GGTACGACCAACGGAGAGTCTCGACTCTGCAACTGCTTCGAGTGAACTTGAGCCGGCCTTTTATCCTGTTCGCCA CAGAGCCCATTCTGTGGTTCATGAATCTCTGGTCAGTGACCTCCTTCTCCTCTGCGGGCACGCCTCCGTTTTGCC TGCACTCTCCTCCCTTCCTCCCGTCCGACGTCGTTTCGTCAGCAAGACCAAGAGTGAAATGGTCCAGAGCCAAAA TGAGTTGCTGAAAAGGGCAGTATCAGGATCTCCATCGCCTACAGCATCTTGTACTTCTGCTTCATAGCCTACCCT GTTGTCTTCTCCCAACATCGAGGATAG |