© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2033 |
| Gene name | |
| Location | Contig_1472:3404..4391 |
| Strand | - |
| Gene length (bp) | 987 |
| Transcript length (bp) | 987 |
| Coding sequence length (bp) | 987 |
| Protein length (aa) | 329 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P36516|RM03_YEAST | 54S ribosomal protein L3, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRPL3 PE=1 SV=2 | 9 | 299 | 1.0E-43 |
| sp|O43042|RM03_SCHPO | 54S ribosomal protein L3, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mrpl3 PE=3 SV=1 | 11 | 328 | 1.0E-39 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.5979 | 0.4112 | 0.0735 | 0.02 | 0.3781 | 0.0277 | 0.1996 | 0.0469 | 0.0984 | 0.0084 |
| Orthofinder run ID | 4 |
| Orthogroup | 4966 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2033 LPSPSFKRAAASAKLAALHARLSLSDKIPRQTLARALITPSADPNANFNNSALAFLGSTIINYHILEFLVCKWPR LPMTILYESLRAYAGLDSLQQVARRWGVEAAAAPGEEVDPGLLQWKVVNEDLSRTRWGYVRSEVQRNVTVSYRRG LSSRIVLDDDFGDMVQQPGSPEDHYQQAQNGAFASFVQAVVGSIQAHCGREAAKSFIAAHILSRHLDPSVLFQFQ LPTRELAMLCAREGFEPPLARLESETGRLSRTPVFVVGIYSGKEKLGEAAGPSLDVARRKACMMSLKAWYLYSPG NKVRVPSDMIKDGAKPWTAPHIDIGEII* |
| Coding | >Hirsu2|2033 CTGCCCTCGCCCTCGTTCAAAAGGGCCGCCGCGTCTGCCAAGCTGGCCGCCCTGCACGCCCGATTATCTCTCTCC GACAAGATCCCCCGGCAGACGTTGGCACGGGCCCTCATCACACCTTCCGCCGACCCCAACGCCAACTTCAACAAC TCGGCTCTTGCCTTCTTGGGGAGCACCATCATCAACTACCACATCCTCGAGTTCCTCGTCTGCAAGTGGCCACGC CTGCCCATGACCATCCTTTACGAATCTCTGAGGGCTTACGCTGGCCTCGATTCGCTTCAACAGGTGGCCCGTCGC TGGGGCGTCGAGGCGGCGGCGGCGCCTGGCGAAGAGGTCGACCCCGGACTGCTTCAGTGGAAGGTCGTCAACGAA GATCTGTCCAGAACGCGCTGGGGATACGTTCGCTCCGAAGTTCAGCGAAACGTAACCGTATCGTACCGTCGCGGA CTCAGCAGCCGGATAGTCCTCGACGACGACTTCGGTGACATGGTGCAGCAGCCCGGTTCTCCGGAGGATCATTAT CAGCAGGCTCAGAATGGGGCCTTTGCGTCCTTCGTTCAGGCAGTCGTTGGCTCTATTCAGGCGCATTGCGGTCGC GAGGCCGCCAAGTCTTTTATCGCCGCTCACATCTTGTCGCGGCACTTGGATCCCTCCGTTCTTTTTCAATTCCAG CTGCCAACACGCGAGCTCGCCATGCTCTGCGCCCGCGAGGGATTCGAACCGCCCCTGGCGCGTCTGGAAAGCGAG ACCGGTCGCCTGTCCCGCACCCCGGTCTTCGTCGTTGGCATCTATAGTGGTAAAGAGAAGCTGGGGGAGGCCGCT GGCCCGAGCCTGGATGTAGCGCGGCGGAAAGCATGTATGATGTCGCTAAAAGCCTGGTATTTGTACAGTCCTGGG AACAAGGTGCGCGTGCCAAGCGACATGATCAAGGACGGCGCCAAACCGTGGACGGCGCCGCATATCGACATCGGG GAGATCATCTGA |
| Transcript | >Hirsu2|2033 CTGCCCTCGCCCTCGTTCAAAAGGGCCGCCGCGTCTGCCAAGCTGGCCGCCCTGCACGCCCGATTATCTCTCTCC GACAAGATCCCCCGGCAGACGTTGGCACGGGCCCTCATCACACCTTCCGCCGACCCCAACGCCAACTTCAACAAC TCGGCTCTTGCCTTCTTGGGGAGCACCATCATCAACTACCACATCCTCGAGTTCCTCGTCTGCAAGTGGCCACGC CTGCCCATGACCATCCTTTACGAATCTCTGAGGGCTTACGCTGGCCTCGATTCGCTTCAACAGGTGGCCCGTCGC TGGGGCGTCGAGGCGGCGGCGGCGCCTGGCGAAGAGGTCGACCCCGGACTGCTTCAGTGGAAGGTCGTCAACGAA GATCTGTCCAGAACGCGCTGGGGATACGTTCGCTCCGAAGTTCAGCGAAACGTAACCGTATCGTACCGTCGCGGA CTCAGCAGCCGGATAGTCCTCGACGACGACTTCGGTGACATGGTGCAGCAGCCCGGTTCTCCGGAGGATCATTAT CAGCAGGCTCAGAATGGGGCCTTTGCGTCCTTCGTTCAGGCAGTCGTTGGCTCTATTCAGGCGCATTGCGGTCGC GAGGCCGCCAAGTCTTTTATCGCCGCTCACATCTTGTCGCGGCACTTGGATCCCTCCGTTCTTTTTCAATTCCAG CTGCCAACACGCGAGCTCGCCATGCTCTGCGCCCGCGAGGGATTCGAACCGCCCCTGGCGCGTCTGGAAAGCGAG ACCGGTCGCCTGTCCCGCACCCCGGTCTTCGTCGTTGGCATCTATAGTGGTAAAGAGAAGCTGGGGGAGGCCGCT GGCCCGAGCCTGGATGTAGCGCGGCGGAAAGCATGTATGATGTCGCTAAAAGCCTGGTATTTGTACAGTCCTGGG AACAAGGTGCGCGTGCCAAGCGACATGATCAAGGACGGCGCCAAACCGTGGACGGCGCCGCATATCGACATCGGG GAGATCATCTGA |
| Gene | >Hirsu2|2033 CTGCCCTCGCCCTCGTTCAAAAGGGCCGCCGCGTCTGCCAAGCTGGCCGCCCTGCACGCCCGATTATCTCTCTCC GACAAGATCCCCCGGCAGACGTTGGCACGGGCCCTCATCACACCTTCCGCCGACCCCAACGCCAACTTCAACAAC TCGGCTCTTGCCTTCTTGGGGAGCACCATCATCAACTACCACATCCTCGAGTTCCTCGTCTGCAAGTGGCCACGC CTGCCCATGACCATCCTTTACGAATCTCTGAGGGCTTACGCTGGCCTCGATTCGCTTCAACAGGTGGCCCGTCGC TGGGGCGTCGAGGCGGCGGCGGCGCCTGGCGAAGAGGTCGACCCCGGACTGCTTCAGTGGAAGGTCGTCAACGAA GATCTGTCCAGAACGCGCTGGGGATACGTTCGCTCCGAAGTTCAGCGAAACGTAACCGTATCGTACCGTCGCGGA CTCAGCAGCCGGATAGTCCTCGACGACGACTTCGGTGACATGGTGCAGCAGCCCGGTTCTCCGGAGGATCATTAT CAGCAGGCTCAGAATGGGGCCTTTGCGTCCTTCGTTCAGGCAGTCGTTGGCTCTATTCAGGCGCATTGCGGTCGC GAGGCCGCCAAGTCTTTTATCGCCGCTCACATCTTGTCGCGGCACTTGGATCCCTCCGTTCTTTTTCAATTCCAG CTGCCAACACGCGAGCTCGCCATGCTCTGCGCCCGCGAGGGATTCGAACCGCCCCTGGCGCGTCTGGAAAGCGAG ACCGGTCGCCTGTCCCGCACCCCGGTCTTCGTCGTTGGCATCTATAGTGGTAAAGAGAAGCTGGGGGAGGCCGCT GGCCCGAGCCTGGATGTAGCGCGGCGGAAAGCATGTATGATGTCGCTAAAAGCCTGGTATTTGTACAGTCCTGGG AACAAGGTGCGCGTGCCAAGCGACATGATCAAGGACGGCGCCAAACCGTGGACGGCGCCGCATATCGACATCGGG GAGATCATCTGA |