Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|202
Gene name
LocationContig_1034:4003..5467
Strand-
Gene length (bp)1464
Transcript length (bp)888
Coding sequence length (bp)888
Protein length (aa) 296

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus 0.5077 0.5863 0.2144 0.1037 0.4555 0.1613 0.291 0.2836 0.3085 0.0638

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup8958
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|202 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|202
MDRTDMHTYIQTCHAVSRLAPGIQAGSLLVRSLGLDVVGDQAVAFHHPHTRMSLSARPPSERRRRTVRRAATRTR
GASPATGPSFHSRPTAHTFAPCVASPSFLRGSAIAFFFLRGSGTAGSRGLFLLMMDVGRSGPLPLSLTATEPEEE
AGFFSDRALCDGWVAARLFRAPPPGIQDKLSYGRYGRDTAARPALGTSPLPARPSVPSTPTAAAGTAAPAPGSRG
TWTGHGWPPPVTESGRPVAGAGAASPFLPLVHSSSHPGNFSSPLLSRSPASPPPVSRQPRSRLGPSFLSS*
Coding >Hirsu2|202
ATGGACAGGACAGACATGCATACCTACATACAAACATGCCACGCCGTGAGCCGCCTCGCGCCCGGCATCCAGGCC
GGCTCGCTGCTGGTACGCAGTCTCGGTCTTGACGTCGTCGGCGATCAGGCCGTTGCTTTCCACCATCCCCACACG
CGCATGTCTCTGTCTGCGCGTCCGCCATCCGAGCGCCGTCGCCGCACCGTACGCCGCGCCGCGACCCGCACTCGG
GGCGCTTCTCCAGCAACCGGACCTTCATTTCACAGCCGGCCTACCGCACATACCTTTGCTCCTTGCGTCGCATCG
CCCTCTTTCCTTCGAGGCTCGGCCATTGCCTTTTTTTTCCTTCGAGGCTCGGGCACGGCCGGCTCTCGAGGCCTC
TTCTTGCTGATGATGGACGTCGGCCGCTCTGGCCCCCTCCCCCTTTCACTCACCGCGACAGAGCCAGAAGAGGAG
GCCGGTTTCTTTAGCGACCGGGCACTGTGCGACGGCTGGGTAGCCGCTAGGCTCTTTCGGGCCCCCCCCCCCGGC
ATCCAGGACAAACTTAGCTACGGTCGGTACGGCAGAGATACCGCGGCCCGGCCTGCGCTCGGTACCTCGCCGCTA
CCCGCCCGGCCCAGCGTGCCGTCGACGCCCACAGCGGCGGCAGGTACCGCCGCACCCGCGCCAGGCAGCCGAGGT
ACCTGGACAGGCCACGGTTGGCCGCCGCCCGTCACTGAAAGTGGCCGGCCAGTCGCTGGAGCGGGCGCTGCCTCT
CCTTTCCTTCCACTGGTCCACTCCTCCTCCCACCCTGGAAATTTCTCCTCTCCTCTCCTCTCTCGCTCTCCCGCT
AGCCCACCCCCCGTCTCCCGACAGCCACGATCTCGCCTCGGTCCTTCGTTTCTCTCCTCCTGA
Transcript >Hirsu2|202
ATGGACAGGACAGACATGCATACCTACATACAAACATGCCACGCCGTGAGCCGCCTCGCGCCCGGCATCCAGGCC
GGCTCGCTGCTGGTACGCAGTCTCGGTCTTGACGTCGTCGGCGATCAGGCCGTTGCTTTCCACCATCCCCACACG
CGCATGTCTCTGTCTGCGCGTCCGCCATCCGAGCGCCGTCGCCGCACCGTACGCCGCGCCGCGACCCGCACTCGG
GGCGCTTCTCCAGCAACCGGACCTTCATTTCACAGCCGGCCTACCGCACATACCTTTGCTCCTTGCGTCGCATCG
CCCTCTTTCCTTCGAGGCTCGGCCATTGCCTTTTTTTTCCTTCGAGGCTCGGGCACGGCCGGCTCTCGAGGCCTC
TTCTTGCTGATGATGGACGTCGGCCGCTCTGGCCCCCTCCCCCTTTCACTCACCGCGACAGAGCCAGAAGAGGAG
GCCGGTTTCTTTAGCGACCGGGCACTGTGCGACGGCTGGGTAGCCGCTAGGCTCTTTCGGGCCCCCCCCCCCGGC
ATCCAGGACAAACTTAGCTACGGTCGGTACGGCAGAGATACCGCGGCCCGGCCTGCGCTCGGTACCTCGCCGCTA
CCCGCCCGGCCCAGCGTGCCGTCGACGCCCACAGCGGCGGCAGGTACCGCCGCACCCGCGCCAGGCAGCCGAGGT
ACCTGGACAGGCCACGGTTGGCCGCCGCCCGTCACTGAAAGTGGCCGGCCAGTCGCTGGAGCGGGCGCTGCCTCT
CCTTTCCTTCCACTGGTCCACTCCTCCTCCCACCCTGGAAATTTCTCCTCTCCTCTCCTCTCTCGCTCTCCCGCT
AGCCCACCCCCCGTCTCCCGACAGCCACGATCTCGCCTCGGTCCTTCGTTTCTCTCCTCCTGA
Gene >Hirsu2|202
ATGGACAGGACAGACATGCATACCTACATACAAACATGCCACGCCGTGAGCCGCCTCGCGCCCGGCATCCAGGCC
GGCTCGCTGCTGGTACGCAGTCTCGGTCTTGACGTCGTCGGCGATCAGGCCGTTGCTTTCCACCATCCCCACACG
CGCATGTCTCTGTCTGCGCGTCCGCCATCCGAGCGCCGTCGCCGCACCGTACGCCGCGCCGCGACCCGCACTCGG
GGCGCTTCTCCAGCAACCGGACCTTCATTTCACAGCCGGCCTACCGCACATACCTTTGCTCCTTGCGTCGCATCG
CCCTCTTTCCTTCGAGGCTCGGCCATTGCCTTTTTTTTCCTTCGAGGCTCGGGCACGGCCGGCTCTCGAGGCCTC
TTCTTGCTGATGATGGACGTCGGCCGCTCTGGCCCCCTCCCCCTTTCACTCACCGCGACAGAGCCAGAAGAGGAG
GCCGGTTTCTTTAGCGACCGGGCACTGTGCGACGGCTGGGTAGCCGCTAGGTACCTAGTGGACCAGTATTAGCGG
TTCGCGCCAGGTACCGGCTGCGTTCAGGCTGTGTGCAGCCCAGGCGACTCGTCCCCGCAGCCGTCTTTTCTCTCT
CTCGCCGTCTCCCCGTGCGTGCGCGTGCGCGCCTGTGTGTGTGTGTGTGTGCGTCTTCTTGTCGTGGACTGATGA
TTTCGCCATGGCTCCCAGCTCCTTGCACTCAATCACGCCGCTTGGCTTTTCTTTGCAGAGGAGGAACCGAGTCGG
CCCGCCCATCGCCATCAGCAGCCGCTCAGGTCCTGCGCAGGTACCTGCCGGGCGGGCGGGTAGAGAGGCGACAAG
TACCCCTGCGGTACCGGAGATGGCTTCCCCAGGCGTCGGCAGCCGCTGACCACCCGTCCAGGCACCACCGCTGGA
CAGGTTGTACCTTTCGCTATCCCCTACCTGTCTGTGCCTTGGAGGAGGTAGCAGTGGTAGGCGATATCGCCGTTG
TAATGGCCGTGCGGCACGCCCGGGTCTAGCACCTTAGCAGAGGCAGGTTGGCTCGTGGTAGGCGCTCGCTACTGC
TACGGTAACTCGGCGACGAAGTGTAGGCTCTTTCGGGCCCCCCCCCCCGGCATCCAGGACAAACTTAGCTACGGT
CGGTACGGCAGAGATACCGCGGCCCGGCCTGCGCTCGGTACCTCGCCGCTACCCGCCCGGCCCAGCGTGCCGTCG
ACGCCCACAGCGGCGGCAGGTACCGCCGCACCCGCGCCAGGCAGCCGAGGTACCTGGACAGGCCACGGTTGGCCG
CCGCCCGTCACTGAAAGTGGCCGGCCAGTCGCTGGAGCGGGCGCTGCCTCTCCTTTCCTTCCACTGGTCCACTCC
TCCTCCCACCCTGGAAATTTCTCCTCTCCTCTCCTCTCTCGCTCTCCCGCTAGCCCACCCCCCGTCTCCCGACAG
CCACGATCTCGCCTCGGTCCTTCGTTTCTCTCCTCCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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