Protein ID | Hirsu2|2010 |
Gene name | |
Location | Contig_1468:596..2990 |
Strand | - |
Gene length (bp) | 2394 |
Transcript length (bp) | 1848 |
Coding sequence length (bp) | 1848 |
Protein length (aa) | 616 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 94 | 116 | 22 |
2 | 171 | 193 | 22 |
3 | 208 | 230 | 22 |
4 | 242 | 264 | 22 |
5 | 279 | 301 | 22 |
6 | 455 | 477 | 22 |
7 | 487 | 509 | 22 |
8 | 516 | 538 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2010 MSEHGQLDPVEKLRPLRSPVVSFSTGVNDRNSPSLATDNFLAQDQARIDDELPDFQRHSEPTLLELFFDLFFAAS YDVFSDTQDVTSVDRFGAFVGYFCLMWLTWFVVTLFDVRYVTDSIFSRVTRAIHLGVMVGFAVVTPRYDPTKQHP ETMQTMSLILMISRLCLTIDSAYWVWYILSGVETCFSLLLSASSPALSLSKTHLMKRMTVMTIMIMGDGIIKMAT DVVTLVRNQSAWNDISIGLVTGASATFYFVFLIYFDWIRSTFCLPTWRQLVWTVTHLPFHLALIMFSKGFTQLII WTRIVNYIEQQGQTIRSYQSWPGLTSREITDQLNASTRQFLHDFPPKIQDTWATVDEALVNISRLPDWVWIAPDL QPNGTVNQLSDDEADRFAACIPIIFICQANALLATYNINFDLESQPASHLADAPGTELAEAKGSMYQAQILRKAS DRYSLVFCYSYIATGITLFLMAILAVVVRTPPRKAWPLIRLTVILLLALATGLTALLFLRADGEFISSAWITPPI TLVWTLVLLMTHINGEGVRRNAHLFQRRKPPYDMAATSVPLNAPTPAASCADGVRDDATQGSSQSLPQDRYRPAT AKQLDGWDSRSNGWT* |
Coding | >Hirsu2|2010 ATGTCGGAGCATGGCCAGCTTGACCCAGTCGAAAAGCTCCGGCCGCTGAGAAGCCCCGTCGTCAGCTTCAGCACC GGTGTCAATGACCGCAACAGTCCCTCCCTTGCCACCGACAATTTCCTTGCCCAAGACCAGGCCCGCATCGATGAC GAGCTGCCGGACTTTCAGCGCCATTCCGAGCCAACTCTTCTCGAGCTCTTCTTCGACCTCTTCTTCGCTGCCAGC TACGACGTCTTCTCCGACACGCAGGATGTAACCTCGGTGGACCGCTTCGGCGCCTTTGTCGGATACTTCTGTCTC ATGTGGCTGACCTGGTTTGTCGTGACGCTTTTCGACGTTCGCTACGTCACAGACAGCATCTTTTCTCGTGTGACG CGAGCTATCCATCTCGGTGTCATGGTCGGATTCGCCGTGGTGACGCCCAGGTACGACCCGACGAAACAGCATCCC GAGACGATGCAGACCATGTCACTCATCCTCATGATTTCGCGCCTCTGCTTGACCATTGACAGCGCCTACTGGGTC TGGTACATCCTGTCCGGCGTCGAAACCTGTTTTTCCTTGCTCCTGTCCGCCTCGTCTCCCGCCCTGAGCCTGTCC AAGACGCACTTGATGAAGCGCATGACGGTCATGACGATCATGATCATGGGCGACGGCATCATCAAGATGGCAACG GACGTCGTGACACTCGTCAGAAACCAGAGTGCATGGAACGACATAAGCATCGGCCTGGTGACGGGAGCTTCCGCC ACCTTCTACTTCGTCTTTTTGATTTATTTCGACTGGATTCGATCGACCTTCTGCCTCCCGACCTGGCGGCAGCTC GTCTGGACCGTCACGCACCTGCCCTTCCACCTCGCTCTCATCATGTTCTCCAAGGGTTTTACGCAGCTCATCATC TGGACCCGAATCGTCAATTACATCGAGCAACAGGGACAGACGATCCGTTCGTACCAATCGTGGCCCGGCTTGACG AGCAGAGAAATCACGGACCAGCTCAACGCCTCCACACGGCAATTCCTCCACGACTTTCCCCCCAAGATCCAAGAC ACTTGGGCTACGGTCGACGAAGCGCTCGTCAACATTTCTCGACTGCCCGACTGGGTGTGGATAGCTCCGGACTTG CAGCCAAACGGAACAGTAAACCAGCTGAGCGACGACGAAGCGGATCGGTTTGCCGCGTGCATTCCCATCATCTTC ATCTGTCAGGCCAATGCGCTGTTGGCAACGTACAACATCAACTTCGATCTCGAATCCCAACCTGCTTCCCACCTT GCCGACGCGCCCGGCACGGAATTGGCGGAGGCCAAAGGCAGCATGTATCAGGCTCAAATCTTGCGCAAGGCAAGC GACCGCTACTCGCTCGTGTTTTGCTATTCGTACATTGCCACCGGAATCACACTGTTCCTCATGGCCATCCTGGCC GTCGTCGTCCGCACCCCGCCTCGCAAGGCATGGCCGTTGATCCGACTGACTGTCATCCTGCTGCTGGCCCTGGCC ACCGGCCTGACGGCCCTGCTCTTCCTCCGCGCCGACGGCGAATTCATCTCGTCGGCCTGGATCACCCCGCCCATC ACCCTGGTCTGGACCCTGGTCCTGCTGATGACGCACATCAACGGAGAGGGCGTGCGGCGCAACGCCCATCTCTTC CAGCGCCGCAAGCCGCCGTACGACATGGCGGCCACCTCGGTTCCGCTGAATGCCCCGACTCCGGCCGCGAGCTGC GCGGACGGGGTGCGCGACGATGCCACACAGGGCTCCTCCCAGTCGTTGCCGCAGGACCGTTACCGGCCGGCCACG GCCAAGCAGCTGGACGGCTGGGACAGCCGTAGCAACGGGTGGACGTGA |
Transcript | >Hirsu2|2010 ATGTCGGAGCATGGCCAGCTTGACCCAGTCGAAAAGCTCCGGCCGCTGAGAAGCCCCGTCGTCAGCTTCAGCACC GGTGTCAATGACCGCAACAGTCCCTCCCTTGCCACCGACAATTTCCTTGCCCAAGACCAGGCCCGCATCGATGAC GAGCTGCCGGACTTTCAGCGCCATTCCGAGCCAACTCTTCTCGAGCTCTTCTTCGACCTCTTCTTCGCTGCCAGC TACGACGTCTTCTCCGACACGCAGGATGTAACCTCGGTGGACCGCTTCGGCGCCTTTGTCGGATACTTCTGTCTC ATGTGGCTGACCTGGTTTGTCGTGACGCTTTTCGACGTTCGCTACGTCACAGACAGCATCTTTTCTCGTGTGACG CGAGCTATCCATCTCGGTGTCATGGTCGGATTCGCCGTGGTGACGCCCAGGTACGACCCGACGAAACAGCATCCC GAGACGATGCAGACCATGTCACTCATCCTCATGATTTCGCGCCTCTGCTTGACCATTGACAGCGCCTACTGGGTC TGGTACATCCTGTCCGGCGTCGAAACCTGTTTTTCCTTGCTCCTGTCCGCCTCGTCTCCCGCCCTGAGCCTGTCC AAGACGCACTTGATGAAGCGCATGACGGTCATGACGATCATGATCATGGGCGACGGCATCATCAAGATGGCAACG GACGTCGTGACACTCGTCAGAAACCAGAGTGCATGGAACGACATAAGCATCGGCCTGGTGACGGGAGCTTCCGCC ACCTTCTACTTCGTCTTTTTGATTTATTTCGACTGGATTCGATCGACCTTCTGCCTCCCGACCTGGCGGCAGCTC GTCTGGACCGTCACGCACCTGCCCTTCCACCTCGCTCTCATCATGTTCTCCAAGGGTTTTACGCAGCTCATCATC TGGACCCGAATCGTCAATTACATCGAGCAACAGGGACAGACGATCCGTTCGTACCAATCGTGGCCCGGCTTGACG AGCAGAGAAATCACGGACCAGCTCAACGCCTCCACACGGCAATTCCTCCACGACTTTCCCCCCAAGATCCAAGAC ACTTGGGCTACGGTCGACGAAGCGCTCGTCAACATTTCTCGACTGCCCGACTGGGTGTGGATAGCTCCGGACTTG CAGCCAAACGGAACAGTAAACCAGCTGAGCGACGACGAAGCGGATCGGTTTGCCGCGTGCATTCCCATCATCTTC ATCTGTCAGGCCAATGCGCTGTTGGCAACGTACAACATCAACTTCGATCTCGAATCCCAACCTGCTTCCCACCTT GCCGACGCGCCCGGCACGGAATTGGCGGAGGCCAAAGGCAGCATGTATCAGGCTCAAATCTTGCGCAAGGCAAGC GACCGCTACTCGCTCGTGTTTTGCTATTCGTACATTGCCACCGGAATCACACTGTTCCTCATGGCCATCCTGGCC GTCGTCGTCCGCACCCCGCCTCGCAAGGCATGGCCGTTGATCCGACTGACTGTCATCCTGCTGCTGGCCCTGGCC ACCGGCCTGACGGCCCTGCTCTTCCTCCGCGCCGACGGCGAATTCATCTCGTCGGCCTGGATCACCCCGCCCATC ACCCTGGTCTGGACCCTGGTCCTGCTGATGACGCACATCAACGGAGAGGGCGTGCGGCGCAACGCCCATCTCTTC CAGCGCCGCAAGCCGCCGTACGACATGGCGGCCACCTCGGTTCCGCTGAATGCCCCGACTCCGGCCGCGAGCTGC GCGGACGGGGTGCGCGACGATGCCACACAGGGCTCCTCCCAGTCGTTGCCGCAGGACCGTTACCGGCCGGCCACG GCCAAGCAGCTGGACGGCTGGGACAGCCGTAGCAACGGGTGGACGTGA |
Gene | >Hirsu2|2010 ATGTCGGAGCATGGCCAGCTTGACCCAGTCGAAAAGCTCCGGCCGCTGAGAAGCCCCGTCGTCAGCTTCAGCACC GGTGTCAATGACCGCAACAGTCCCTCCCTTGCCACCGACAATTTCCTTGCCCAAGACCAGGCCCGCATCGATGAC GAGCTGCCGGACTTTCAGCGCGTATGCCACTCTGTCGCTGCTGTTGTCTCGCCCGAGCCGCCTGACTGACCATGC CTCCCATTCGTCGCCCCTCCAGCATTCCGAGCCAACTCTTCTCGAGCTCTTCTTCGACCTCTTCTTCGCTGCCAG CTACGACGTCTTCTCCGACACGCAGGATGTAACCTCGGTGGACCGCTTCGGCGCCTTTGTCGGATACTTCTGGTA CGCCCTCCTCCTTTTGCCGCCTCATCCACGCGATACTCACTGACACGACGTCTCTCCAAGTCTCATGTGGCTGAC CTGGTTTGTCGTGACGCTTTTCGACGTTCGCTACGTCACAGACAGCATCTTTTGTATGCCCTCCTGTCTGTCCAC GCGTCTGGGCTCTCGCCATGGCTGACCAAGAGACTACCAAGCTCGTGTGACGCGAGCTATCCATCTCGGTGTCAT GGTCGGATTCGCCGTGGTGACGCCCAGGTACGACCCGACGAAACAGCATCCCGAGACGATGCAGACCATGTGTAC GTTTTCTCGTCTACACTGTCGTTTGACCAGGACGCCGGCCTCATCTGACGCCTGCCAGCACTCATCCTCATGATT TCGCGCCTCTGCTTGACCATTGAGTATGGGACAACTCTGTGGCACGTGTGGCGGTTCACAGCGACACACCAACCC CTTTTTGCCCAAATCACCATTCACGCCGTGGCCGCGGTTGTTTATCTGGGGGTATCCTTTTGTTTTGCACACGGC AAGCACAGCAGCGCCTACTGGGTCTGGTACATCCTGTCCGGCGTCGAAACCTGTTTTTCCTTGCTCCTGTCCGCC TCGTCTCCCGCCCTGAGCCTGTCCAAGACGCACTTGATGAAGCGCATGACGGTCATGACGATCATGATCATGGGC GACGGCATCATCAAGATGGCAACGGACGTCGTGACACTCGTCAGAAACCAGAGTGCATGGAGTGAGTCCGGGCCA GCCGCCGTGGTCTCTGCTCTTTCGTCGTGCTGACCGAGGGCGGCAGACGACATAAGCATCGGCCTGGTGACGGGA GCTTCCGCCACCTTCTACTTCGTCTTTTTGATTTATTTCGACTGGATTCGATCGACCTTCTGCCTCCCGACCTGG CGGCAGCTCGTCTGGACCGTCACGCACCTGCCCTTCCACCTCGCTCTCATCATGTTCTCCAAGGGTTTTACGCAG CTCATCATCTGGACCCGAATCGTCAATTACATCGAGCAACAGGGACAGACGATCCGTTCGTACCAATCGTGGCCC GGCTTGACGAGCAGAGAAATCACGGACCAGCTCAACGCCTCCACACGGCAATTCCTCCACGACTTTCCCCCCAAG ATCCAAGACACTTGGGCTACGGTCGACGAAGCGCTCGTCAACATTTCTCGACTGCCCGACTGGGTGTGGATAGCT CCGGACTTGCAGCCAAACGGAACAGTAAACCAGCTGAGCGACGACGAAGCGGATCGGTTTGCCGCGTGCATTCCC ATCATCTTCATCTGTCAGGCCAATGCGCTGTTGGCAACGTACAACATCAACTTCGATCTCGAATCCCAACCTGCT TCCCACCTTGCCGACGCGCCCGGCACGGAATTGGCGGAGGCCAAAGGCAGCATGTATCAGGCTCAAATCTTGCGC AAGGCAAGCGACCGCTACTCGCTCGTGGTACGTTGACGGCCCCACGGCAGCACGGCCGCCCCCCTCGGGCGGCGA GAGGACGTTGCGTTGGCGTGCTGACGGAGCGGATCGCAGTTTTGCTATTCGTACATTGCCACCGGAATCACACTG TTCCTCATGGCCATCCTGGCCGTCGTCGTCCGCACCCCGCCTCGCAAGGCATGGCCGTTGATCCGACTGACTGTC ATCCTGCTGCTGGCCCTGGCCACCGGCCTGACGGCCCTGCTCTTCCTCCGCGCCGACGGCGAATTCATCTCGTCG GCCTGGATCACCCCGCCCATCACCCTGGTCTGGACCCTGGTCCTGCTGATGACGCACATCAACGGAGAGGGCGTG CGGCGCAACGCCCATCTCTTCCAGCGCCGCAAGCCGCCGTACGACATGGCGGCCACCTCGGTTCCGCTGAATGCC CCGACTCCGGCCGCGAGCTGCGCGGACGGGGTGCGCGACGATGCCACACAGGGCTCCTCCCAGTCGTTGCCGCAG GACCGTTACCGGCCGGCCACGGCCAAGCAGCTGGACGGCTGGGACAGCCGTAGCAACGGGTGGACGTGA |