Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2000
Gene name
LocationContig_1462:1076..1990
Strand-
Gene length (bp)914
Transcript length (bp)810
Coding sequence length (bp)810
Protein length (aa) 270

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00173 Cyt-b5 Cytochrome b5-like Heme/Steroid binding domain 3.5E-15 103 163

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9M2Z4|MSBP2_ARATH Membrane steroid-binding protein 2 OS=Arabidopsis thaliana GN=MSBP2 PE=1 SV=1 59 170 3.0E-14
sp|Q9SK39|SBP3_ARATH Probable steroid-binding protein 3 OS=Arabidopsis thaliana GN=MP3 PE=1 SV=1 102 173 7.0E-14
sp|Q9XFM6|MSBP1_ARATH Membrane steroid-binding protein 1 OS=Arabidopsis thaliana GN=MSBP1 PE=1 SV=2 102 170 3.0E-13
sp|A2CES0|NEUFC_DANRE Neuferricin OS=Danio rerio GN=cyb5d2 PE=3 SV=1 100 157 3.0E-13
sp|Q2HIW2|MAPR4_ARATH Membrane-associated progesterone-binding protein 4 OS=Arabidopsis thaliana GN=MAPR4 PE=2 SV=1 102 167 7.0E-13
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Swissprot ID Swissprot Description Start End E-value
sp|Q9M2Z4|MSBP2_ARATH Membrane steroid-binding protein 2 OS=Arabidopsis thaliana GN=MSBP2 PE=1 SV=1 59 170 3.0E-14
sp|Q9SK39|SBP3_ARATH Probable steroid-binding protein 3 OS=Arabidopsis thaliana GN=MP3 PE=1 SV=1 102 173 7.0E-14
sp|Q9XFM6|MSBP1_ARATH Membrane steroid-binding protein 1 OS=Arabidopsis thaliana GN=MSBP1 PE=1 SV=2 102 170 3.0E-13
sp|A2CES0|NEUFC_DANRE Neuferricin OS=Danio rerio GN=cyb5d2 PE=3 SV=1 100 157 3.0E-13
sp|Q2HIW2|MAPR4_ARATH Membrane-associated progesterone-binding protein 4 OS=Arabidopsis thaliana GN=MAPR4 PE=2 SV=1 102 167 7.0E-13
sp|O15173|PGRC2_HUMAN Membrane-associated progesterone receptor component 2 OS=Homo sapiens GN=PGRMC2 PE=1 SV=1 102 163 3.0E-12
sp|Q5ZKN2|PGRC1_CHICK Membrane-associated progesterone receptor component 1 OS=Gallus gallus GN=PGRMC1 PE=2 SV=3 102 163 8.0E-12
sp|Q5XIU9|PGRC2_RAT Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus GN=Pgrmc2 PE=1 SV=1 102 163 9.0E-12
sp|Q80UU9|PGRC2_MOUSE Membrane-associated progesterone receptor component 2 OS=Mus musculus GN=Pgrmc2 PE=1 SV=2 102 163 9.0E-12
sp|Q28FI8|NEUFC_XENTR Neuferricin OS=Xenopus tropicalis GN=cyb5d2 PE=2 SV=1 102 157 1.0E-11
sp|Q60YT6|NEUFC_CAEBR Neuferricin homolog OS=Caenorhabditis briggsae GN=tag-131 PE=3 SV=1 98 157 3.0E-11
sp|Q9XXA7|NEUFC_CAEEL Neuferricin homolog OS=Caenorhabditis elegans GN=tag-131 PE=3 SV=1 98 157 6.0E-11
sp|Q9W376|NEUFC_DROME Neuferricin homolog OS=Drosophila melanogaster GN=CG12056 PE=2 SV=1 102 157 4.0E-10
sp|Q17QC0|PGRC1_BOVIN Membrane-associated progesterone receptor component 1 OS=Bos taurus GN=PGRMC1 PE=2 SV=3 102 163 5.0E-10
sp|P70580|PGRC1_RAT Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus GN=Pgrmc1 PE=1 SV=3 102 163 5.0E-10
sp|Q6IUR5|NENF_RAT Neudesin OS=Rattus norvegicus GN=Nenf PE=2 SV=1 102 170 5.0E-10
sp|Q5RED0|PGRC1_PONAB Membrane-associated progesterone receptor component 1 OS=Pongo abelii GN=PGRMC1 PE=2 SV=3 102 163 6.0E-10
sp|O00264|PGRC1_HUMAN Membrane-associated progesterone receptor component 1 OS=Homo sapiens GN=PGRMC1 PE=1 SV=3 102 163 6.0E-10
sp|Q95250|PGRC1_PIG Membrane-associated progesterone receptor component 1 OS=Sus scrofa GN=PGRMC1 PE=1 SV=3 102 163 6.0E-10
sp|O55022|PGRC1_MOUSE Membrane-associated progesterone receptor component 1 OS=Mus musculus GN=Pgrmc1 PE=1 SV=4 102 163 7.0E-10
sp|O13995|DAP1_SCHPO Cytochrome P450 regulator dap1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dap1 PE=1 SV=1 92 228 9.0E-10
sp|Q29HF1|NEUFC_DROPS Neuferricin homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA11364 PE=3 SV=1 102 162 9.0E-10
sp|Q9CQ45|NENF_MOUSE Neudesin OS=Mus musculus GN=Nenf PE=1 SV=1 102 161 1.0E-09
sp|Q6AY62|NEUFC_RAT Neuferricin OS=Rattus norvegicus GN=Cyb5d2 PE=2 SV=1 90 157 2.0E-09
sp|Q5SSH8|NEUFC_MOUSE Neuferricin OS=Mus musculus GN=Cyb5d2 PE=1 SV=1 90 157 4.0E-09
sp|Q12091|DAP1_YEAST Damage response protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAP1 PE=1 SV=1 103 235 4.0E-09
sp|Q9UMX5|NENF_HUMAN Neudesin OS=Homo sapiens GN=NENF PE=1 SV=1 102 161 1.0E-08
sp|Q1JQA5|NENF_BOVIN Neudesin OS=Bos taurus GN=NENF PE=2 SV=1 60 161 2.0E-08
sp|Q8WUJ1|NEUFC_HUMAN Neuferricin OS=Homo sapiens GN=CYB5D2 PE=2 SV=1 105 176 2.0E-08
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 44 0.5

Transmembrane Domains

Domain # Start End Length
1 56 78 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2000
MSDSELRQRKTRGGGDDAAVPTEEPGPAAAKKTKTRASRAEADDQYSPWLDVLRVLSFLLVASAALSYVISGGES
WAWGMRNRPYYLRPDWWRDQLMGPVYMTLEELAAHDGRDPTKPLYLAINGTVYDVSRGQHMYGPGGSYHAFAGRD
ASRAFITTCIDEDNNPDVRGAEEAFLPLDDPDTDRRWTAAAMRDLQRRELERAHEKAHLALKNWVDFFANSPKYR
RVGYVRFEPGWLDRQPRKKLCVKAQKARVKRVFHADGDEDEGRA*
Coding >Hirsu2|2000
ATGAGCGACTCGGAGCTGCGTCAGCGCAAGACCAGGGGCGGCGGCGACGACGCGGCCGTGCCCACCGAGGAGCCC
GGCCCGGCGGCGGCCAAGAAGACGAAGACGAGAGCGTCGCGAGCCGAGGCCGACGACCAGTACTCGCCCTGGCTG
GACGTCTTGCGCGTCCTCAGCTTCCTGCTCGTGGCCTCGGCCGCGCTCAGCTACGTCATCAGCGGTGGCGAGTCG
TGGGCCTGGGGGATGCGCAACCGGCCCTACTACCTGCGGCCCGACTGGTGGAGGGACCAGCTGATGGGACCCGTG
TACATGACGCTGGAGGAGCTGGCGGCGCATGACGGCCGCGACCCGACCAAGCCGTTGTACCTGGCCATCAACGGC
ACCGTCTACGACGTGTCGCGCGGGCAGCACATGTACGGGCCGGGCGGGTCGTACCACGCCTTCGCCGGGCGCGAC
GCCTCGCGCGCCTTCATCACCACCTGCATCGACGAGGACAACAACCCGGACGTGCGCGGCGCCGAGGAGGCCTTC
CTGCCGCTCGACGACCCGGACACGGACCGCCGCTGGACGGCCGCCGCCATGCGCGACCTGCAGCGCCGCGAGCTC
GAGCGCGCCCACGAGAAGGCCCACCTCGCCCTCAAGAACTGGGTCGACTTCTTCGCCAACAGCCCCAAGTACCGT
CGCGTCGGCTACGTTCGCTTCGAGCCCGGCTGGCTCGACCGCCAGCCGAGGAAGAAGCTGTGCGTCAAGGCGCAG
AAGGCCCGCGTCAAGCGAGTCTTCCACGCCGATGGGGACGAGGACGAGGGCAGGGCATGA
Transcript >Hirsu2|2000
ATGAGCGACTCGGAGCTGCGTCAGCGCAAGACCAGGGGCGGCGGCGACGACGCGGCCGTGCCCACCGAGGAGCCC
GGCCCGGCGGCGGCCAAGAAGACGAAGACGAGAGCGTCGCGAGCCGAGGCCGACGACCAGTACTCGCCCTGGCTG
GACGTCTTGCGCGTCCTCAGCTTCCTGCTCGTGGCCTCGGCCGCGCTCAGCTACGTCATCAGCGGTGGCGAGTCG
TGGGCCTGGGGGATGCGCAACCGGCCCTACTACCTGCGGCCCGACTGGTGGAGGGACCAGCTGATGGGACCCGTG
TACATGACGCTGGAGGAGCTGGCGGCGCATGACGGCCGCGACCCGACCAAGCCGTTGTACCTGGCCATCAACGGC
ACCGTCTACGACGTGTCGCGCGGGCAGCACATGTACGGGCCGGGCGGGTCGTACCACGCCTTCGCCGGGCGCGAC
GCCTCGCGCGCCTTCATCACCACCTGCATCGACGAGGACAACAACCCGGACGTGCGCGGCGCCGAGGAGGCCTTC
CTGCCGCTCGACGACCCGGACACGGACCGCCGCTGGACGGCCGCCGCCATGCGCGACCTGCAGCGCCGCGAGCTC
GAGCGCGCCCACGAGAAGGCCCACCTCGCCCTCAAGAACTGGGTCGACTTCTTCGCCAACAGCCCCAAGTACCGT
CGCGTCGGCTACGTTCGCTTCGAGCCCGGCTGGCTCGACCGCCAGCCGAGGAAGAAGCTGTGCGTCAAGGCGCAG
AAGGCCCGCGTCAAGCGAGTCTTCCACGCCGATGGGGACGAGGACGAGGGCAGGGCATGA
Gene >Hirsu2|2000
ATGAGCGACTCGGAGCTGCGTCAGCGCAAGACCAGGGGCGGCGGCGACGACGCGGCCGTGCCCACCGAGGAGCCC
GGCCCGGCGGCGGCCAAGAAGACGAAGACGAGAGCGTCGCGAGCCGAGGCCGACGACCAGTACTCGCCCTGGCTG
GACGTCTTGCGCGTCCTCAGCTTCCTGCTCGTGGCCTCGGCCGCGCTCAGCTACGTCATCAGCGGTGGCGAGTCG
TGGGCCTGGGGGATGCGCAACCGGCCCTACTACCTGCGGCCCGACTGGTGGAGGGACCAGCTGGTGAGTTCTCTT
GACTCCTTTTTTGTTTCTTTCCGGTGTCTCGGCTTCGTGGTGATGAGAGAGGGAGGGAGGTTGGCGCTGAAAACA
AAGCTTGGCCGCAACAGATGGGACCCGTGTACATGACGCTGGAGGAGCTGGCGGCGCATGACGGCCGCGACCCGA
CCAAGCCGTTGTACCTGGCCATCAACGGCACCGTCTACGACGTGTCGCGCGGGCAGCACATGTACGGGCCGGGCG
GGTCGTACCACGCCTTCGCCGGGCGCGACGCCTCGCGCGCCTTCATCACCACCTGCATCGACGAGGACAACAACC
CGGACGTGCGCGGCGCCGAGGAGGCCTTCCTGCCGCTCGACGACCCGGACACGGACCGCCGCTGGACGGCCGCCG
CCATGCGCGACCTGCAGCGCCGCGAGCTCGAGCGCGCCCACGAGAAGGCCCACCTCGCCCTCAAGAACTGGGTCG
ACTTCTTCGCCAACAGCCCCAAGTACCGTCGCGTCGGCTACGTTCGCTTCGAGCCCGGCTGGCTCGACCGCCAGC
CGAGGAAGAAGCTGTGCGTCAAGGCGCAGAAGGCCCGCGTCAAGCGAGTCTTCCACGCCGATGGGGACGAGGACG
AGGGCAGGGCATGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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