Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|20
Gene name
LocationContig_10:45975..46649
Strand-
Gene length (bp)674
Transcript length (bp)621
Coding sequence length (bp)621
Protein length (aa) 207

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.5326 0.4276 0.6161 0.1237 0.3713 0.0392 0.1143 0.1222 0.3152 0.0539

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6546
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|06954
Ophiocordyceps camponoti-rufipedis Ophun1|484
Ophiocordyceps kimflemingae Ophio5|5546
Ophiocordyceps subramaniannii Hirsu2|20 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|20
MHSACLCAYPEQKHPHCAKNECYVALATDFGQDLSKNCHRMLSRDFTSGSVPDCKNKLEALVQQSKWLAPMTHAS
RSCRNSAQLMQSACRCALPNVRYRGSRAIADTNIALRSTSVHTQEAYPHDLQKLFLKTQLWKWDNFYIFKTVKAD
SFSLAYAANVPNSQNYRKRDAENHHRYIPAKLDINVLNTRSVHQLSRTLPQAHDEG*
Coding >Hirsu2|20
ATGCATTCGGCCTGTCTCTGTGCATACCCAGAACAGAAACATCCTCACTGTGCAAAGAACGAGTGCTACGTCGCC
TTGGCCACCGACTTTGGGCAGGATCTCAGCAAGAACTGCCACCGAATGCTAAGCAGGGATTTCACGTCAGGCTCG
GTACCGGACTGCAAAAACAAGCTTGAAGCTTTGGTTCAGCAGTCGAAATGGTTGGCTCCAATGACACATGCCTCC
AGGTCCTGTCGGAACAGTGCCCAACTCATGCAGTCGGCTTGTCGCTGTGCTCTGCCCAATGTTCGCTATCGCGGC
TCGCGAGCTATCGCGGACACGAATATTGCACTTAGAAGCACAAGTGTCCACACACAAGAGGCCTACCCACACGAT
CTCCAAAAGCTCTTCCTCAAAACACAACTCTGGAAGTGGGACAACTTCTACATCTTCAAGACAGTCAAAGCAGAC
TCCTTCTCTCTCGCTTACGCGGCAAATGTCCCAAACTCCCAGAACTACCGCAAGAGAGACGCTGAAAATCACCAC
CGCTACATCCCGGCCAAGCTTGATATCAACGTCCTCAACACACGCAGTGTCCACCAGCTCTCACGTACTCTCCCC
CAAGCCCACGACGAAGGTTAA
Transcript >Hirsu2|20
ATGCATTCGGCCTGTCTCTGTGCATACCCAGAACAGAAACATCCTCACTGTGCAAAGAACGAGTGCTACGTCGCC
TTGGCCACCGACTTTGGGCAGGATCTCAGCAAGAACTGCCACCGAATGCTAAGCAGGGATTTCACGTCAGGCTCG
GTACCGGACTGCAAAAACAAGCTTGAAGCTTTGGTTCAGCAGTCGAAATGGTTGGCTCCAATGACACATGCCTCC
AGGTCCTGTCGGAACAGTGCCCAACTCATGCAGTCGGCTTGTCGCTGTGCTCTGCCCAATGTTCGCTATCGCGGC
TCGCGAGCTATCGCGGACACGAATATTGCACTTAGAAGCACAAGTGTCCACACACAAGAGGCCTACCCACACGAT
CTCCAAAAGCTCTTCCTCAAAACACAACTCTGGAAGTGGGACAACTTCTACATCTTCAAGACAGTCAAAGCAGAC
TCCTTCTCTCTCGCTTACGCGGCAAATGTCCCAAACTCCCAGAACTACCGCAAGAGAGACGCTGAAAATCACCAC
CGCTACATCCCGGCCAAGCTTGATATCAACGTCCTCAACACACGCAGTGTCCACCAGCTCTCACGTACTCTCCCC
CAAGCCCACGACGAAGGTTAA
Gene >Hirsu2|20
ATGCATTCGGCCTGTCTCTGTGCATACCCAGAACAGAAACATCCTCACTGTGCAAAGAACGAGTGCTACGTCGCC
TTGGCCACCGACTTTGGGCAGGATCTCAGCAAGAACTGCCACCGAATGCTAAGCAGGGATTTCACGTCAGGCTCG
GTACCGGACTGCAAAAACAAGCTTGAAGCTTTGGTTCAGCAGTCGAAATGGTTGGCTCCAATGACACATGCCTCC
AGGTCCTGTCGGAACAGTGCCCAACTCATGCAGTCGGCTTGTCGCTGTGCTCTGCCCAATGTTCGCTATCGCGGC
TCGCGAGCTATCGCGGACACGAATATTGCACTTAGAAGCACAAGTGTCCACACAGTGATCCCTAGCTCGACGTCG
ACTGTCGTTGTCACGAGCACTAATCTCCCAAGCAAGAGGCCTACCCACACGATCTCCAAAAGCTCTTCCTCAAAA
CACAACTCTGGAAGTGGGACAACTTCTACATCTTCAAGACAGTCAAAGCAGACTCCTTCTCTCTCGCTTACGCGG
CAAATGTCCCAAACTCCCAGAACTACCGCAAGAGAGACGCTGAAAATCACCACCGCTACATCCCGGCCAAGCTTG
ATATCAACGTCCTCAACACACGCAGTGTCCACCAGCTCTCACGTACTCTCCCCCAAGCCCACGACGAAGGTTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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