Protein ID | Hirsu2|1990 |
Gene name | |
Location | Contig_146:14947..15581 |
Strand | + |
Gene length (bp) | 634 |
Transcript length (bp) | 582 |
Coding sequence length (bp) | 582 |
Protein length (aa) | 194 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.144 | 0.0628 | 0.8987 | 0.118 | 0.1248 | 0.079 | 0.2054 | 0.3777 | 0.1477 | 0.0268 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 20 | 0.999324 |
Orthofinder run ID | 4 |
Orthogroup | 1903 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|1990 MASFFARLVFLFCTLPFARAAAAAMASSQPVVPPPADEDASKFFVTAITARDGRSTIECWQLDAPVQLSASPGTK GASNTQLGDVDKLAYTVLPADFDGGLHNAPAAQYVAFLSGHARITVPGSDDVADIHGGADGLIIVTDIASASTEG HRTTYPGKTPTAALQIPFKDGQIPPHKVVSSGPCPVHQLKRHC* |
Coding | >Hirsu2|1990 ATGGCCAGTTTTTTCGCCCGCCTTGTCTTCCTCTTCTGCACCTTGCCCTTCGCCCGCGCCGCCGCCGCCGCCATG GCCTCGTCGCAGCCCGTCGTCCCGCCGCCAGCCGACGAGGACGCCTCCAAGTTCTTCGTCACGGCCATCACCGCC CGCGACGGCCGCTCCACCATCGAGTGCTGGCAGCTCGACGCGCCCGTCCAGCTGTCGGCCTCGCCCGGCACCAAG GGCGCGTCCAACACGCAGCTCGGCGACGTCGACAAGCTCGCCTACACCGTCCTGCCCGCCGACTTCGACGGCGGC TTGCACAACGCCCCCGCCGCCCAATACGTCGCCTTCCTGTCCGGACACGCCCGCATCACCGTCCCCGGCTCCGAC GACGTGGCCGACATCCACGGCGGCGCCGACGGCCTCATCATCGTCACCGACATCGCCTCCGCCAGCACCGAGGGC CACCGCACCACCTACCCCGGCAAAACGCCCACCGCCGCCCTGCAGATCCCCTTCAAGGATGGCCAGATCCCGCCG CACAAGGTGGTGTCGTCCGGGCCGTGCCCCGTCCACCAGCTAAAGAGGCATTGCTAG |
Transcript | >Hirsu2|1990 ATGGCCAGTTTTTTCGCCCGCCTTGTCTTCCTCTTCTGCACCTTGCCCTTCGCCCGCGCCGCCGCCGCCGCCATG GCCTCGTCGCAGCCCGTCGTCCCGCCGCCAGCCGACGAGGACGCCTCCAAGTTCTTCGTCACGGCCATCACCGCC CGCGACGGCCGCTCCACCATCGAGTGCTGGCAGCTCGACGCGCCCGTCCAGCTGTCGGCCTCGCCCGGCACCAAG GGCGCGTCCAACACGCAGCTCGGCGACGTCGACAAGCTCGCCTACACCGTCCTGCCCGCCGACTTCGACGGCGGC TTGCACAACGCCCCCGCCGCCCAATACGTCGCCTTCCTGTCCGGACACGCCCGCATCACCGTCCCCGGCTCCGAC GACGTGGCCGACATCCACGGCGGCGCCGACGGCCTCATCATCGTCACCGACATCGCCTCCGCCAGCACCGAGGGC CACCGCACCACCTACCCCGGCAAAACGCCCACCGCCGCCCTGCAGATCCCCTTCAAGGATGGCCAGATCCCGCCG CACAAGGTGGTGTCGTCCGGGCCGTGCCCCGTCCACCAGCTAAAGAGGCATTGCTAG |
Gene | >Hirsu2|1990 ATGGCCAGTTTTTTCGCCCGCCTTGTCTTCCTCTTCTGCACCTTGCCCTTCGCCCGCGCCGCCGCCGCCGCCATG GCCTCGTCGCAGCCCGTCGTCCCGCCGCCAGCCGACGAGGACGCCTCCAAGTTCTTCGTCACGGCCATCACCGCC CGCGACGGCCGCTCCACCATCGAGTGCTGGCAGCTCGACGCGCCCGTCCAGCTGTCGGCCTCGCCCGGCACCAAG GGCGCGTCCAACACGCAGCTCGGCGACGTCGACAAGCTCGCCTACACCGTCCTGCCCGCCGACTTCGACGGCGGC TTGCACAACGCCCCCGCCGCCCAGTGAGTAGAGAGAGCGGCTGCGGCGTCGAGTCGTGCGTGCTGAACCCGTCAG ATACGTCGCCTTCCTGTCCGGACACGCCCGCATCACCGTCCCCGGCTCCGACGACGTGGCCGACATCCACGGCGG CGCCGACGGCCTCATCATCGTCACCGACATCGCCTCCGCCAGCACCGAGGGCCACCGCACCACCTACCCCGGCAA AACGCCCACCGCCGCCCTGCAGATCCCCTTCAAGGATGGCCAGATCCCGCCGCACAAGGTGGTGTCGTCCGGGCC GTGCCCCGTCCACCAGCTAAAGAGGCATTGCTAG |