Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1990
Gene name
LocationContig_146:14947..15581
Strand+
Gene length (bp)634
Transcript length (bp)582
Coding sequence length (bp)582
Protein length (aa) 194

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.144 0.0628 0.8987 0.118 0.1248 0.079 0.2054 0.3777 0.1477 0.0268

SignalP

SignalP signal predicted Location Score
Yes 1 - 20 0.999324

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1903
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5902
Ophiocordyceps australis map64 (Brazil) OphauB2|2888
Ophiocordyceps camponoti-floridani Ophcf2|03731
Ophiocordyceps camponoti-rufipedis Ophun1|4709
Ophiocordyceps kimflemingae Ophio5|3387
Ophiocordyceps subramaniannii Hirsu2|1990 (this protein)
Ophiocordyceps subramaniannii Hirsu2|4882

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1990
MASFFARLVFLFCTLPFARAAAAAMASSQPVVPPPADEDASKFFVTAITARDGRSTIECWQLDAPVQLSASPGTK
GASNTQLGDVDKLAYTVLPADFDGGLHNAPAAQYVAFLSGHARITVPGSDDVADIHGGADGLIIVTDIASASTEG
HRTTYPGKTPTAALQIPFKDGQIPPHKVVSSGPCPVHQLKRHC*
Coding >Hirsu2|1990
ATGGCCAGTTTTTTCGCCCGCCTTGTCTTCCTCTTCTGCACCTTGCCCTTCGCCCGCGCCGCCGCCGCCGCCATG
GCCTCGTCGCAGCCCGTCGTCCCGCCGCCAGCCGACGAGGACGCCTCCAAGTTCTTCGTCACGGCCATCACCGCC
CGCGACGGCCGCTCCACCATCGAGTGCTGGCAGCTCGACGCGCCCGTCCAGCTGTCGGCCTCGCCCGGCACCAAG
GGCGCGTCCAACACGCAGCTCGGCGACGTCGACAAGCTCGCCTACACCGTCCTGCCCGCCGACTTCGACGGCGGC
TTGCACAACGCCCCCGCCGCCCAATACGTCGCCTTCCTGTCCGGACACGCCCGCATCACCGTCCCCGGCTCCGAC
GACGTGGCCGACATCCACGGCGGCGCCGACGGCCTCATCATCGTCACCGACATCGCCTCCGCCAGCACCGAGGGC
CACCGCACCACCTACCCCGGCAAAACGCCCACCGCCGCCCTGCAGATCCCCTTCAAGGATGGCCAGATCCCGCCG
CACAAGGTGGTGTCGTCCGGGCCGTGCCCCGTCCACCAGCTAAAGAGGCATTGCTAG
Transcript >Hirsu2|1990
ATGGCCAGTTTTTTCGCCCGCCTTGTCTTCCTCTTCTGCACCTTGCCCTTCGCCCGCGCCGCCGCCGCCGCCATG
GCCTCGTCGCAGCCCGTCGTCCCGCCGCCAGCCGACGAGGACGCCTCCAAGTTCTTCGTCACGGCCATCACCGCC
CGCGACGGCCGCTCCACCATCGAGTGCTGGCAGCTCGACGCGCCCGTCCAGCTGTCGGCCTCGCCCGGCACCAAG
GGCGCGTCCAACACGCAGCTCGGCGACGTCGACAAGCTCGCCTACACCGTCCTGCCCGCCGACTTCGACGGCGGC
TTGCACAACGCCCCCGCCGCCCAATACGTCGCCTTCCTGTCCGGACACGCCCGCATCACCGTCCCCGGCTCCGAC
GACGTGGCCGACATCCACGGCGGCGCCGACGGCCTCATCATCGTCACCGACATCGCCTCCGCCAGCACCGAGGGC
CACCGCACCACCTACCCCGGCAAAACGCCCACCGCCGCCCTGCAGATCCCCTTCAAGGATGGCCAGATCCCGCCG
CACAAGGTGGTGTCGTCCGGGCCGTGCCCCGTCCACCAGCTAAAGAGGCATTGCTAG
Gene >Hirsu2|1990
ATGGCCAGTTTTTTCGCCCGCCTTGTCTTCCTCTTCTGCACCTTGCCCTTCGCCCGCGCCGCCGCCGCCGCCATG
GCCTCGTCGCAGCCCGTCGTCCCGCCGCCAGCCGACGAGGACGCCTCCAAGTTCTTCGTCACGGCCATCACCGCC
CGCGACGGCCGCTCCACCATCGAGTGCTGGCAGCTCGACGCGCCCGTCCAGCTGTCGGCCTCGCCCGGCACCAAG
GGCGCGTCCAACACGCAGCTCGGCGACGTCGACAAGCTCGCCTACACCGTCCTGCCCGCCGACTTCGACGGCGGC
TTGCACAACGCCCCCGCCGCCCAGTGAGTAGAGAGAGCGGCTGCGGCGTCGAGTCGTGCGTGCTGAACCCGTCAG
ATACGTCGCCTTCCTGTCCGGACACGCCCGCATCACCGTCCCCGGCTCCGACGACGTGGCCGACATCCACGGCGG
CGCCGACGGCCTCATCATCGTCACCGACATCGCCTCCGCCAGCACCGAGGGCCACCGCACCACCTACCCCGGCAA
AACGCCCACCGCCGCCCTGCAGATCCCCTTCAAGGATGGCCAGATCCCGCCGCACAAGGTGGTGTCGTCCGGGCC
GTGCCCCGTCCACCAGCTAAAGAGGCATTGCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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